BLASTX nr result
ID: Catharanthus22_contig00027404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00027404
(245 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida] 78 1e-12
gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosifor... 77 2e-12
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor... 77 2e-12
ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-12
ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat... 77 3e-12
ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat... 77 3e-12
ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat... 76 4e-12
ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat... 76 5e-12
ref|XP_004295770.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
ref|XP_004295757.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida] 75 7e-12
ref|XP_004296297.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
gb|AAM52339.1| fertility restorer [Petunia x hybrida] 75 9e-12
ref|XP_006360465.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat... 74 3e-11
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 74 3e-11
ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat... 73 3e-11
ref|XP_006389305.1| hypothetical protein POPTR_0030s00250g [Popu... 73 3e-11
ref|XP_004298524.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+K + DA SLFR+MV+ +P PSV+ F++LL LV K Y V+SLF+E+ RI V +
Sbjct: 49 NVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEF 108
Query: 194 TLSVVINSFCLVGRVD 241
LS+V+NS CL+ R D
Sbjct: 109 ILSIVVNSCCLMHRTD 124
>gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+K + DAV+LFR+MV+ +P PSV +F++L ++ K Y V+SLF+EM I ++D
Sbjct: 52 NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLSMKHYSAVVSLFREMQKLGIPINDF 111
Query: 194 TLSVVINSFCLVGRVD 241
LS+VINS+C + RVD
Sbjct: 112 ILSIVINSYCSMHRVD 127
>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+K + DAV+LFR+MV+ +P PSV +F++L ++ + Y V+SLF+EM I ++D
Sbjct: 52 NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLNMEHYSAVVSLFREMQKLGIPINDF 111
Query: 194 TLSVVINSFCLVGRVD 241
L++VINS+CL+ RVD
Sbjct: 112 ILNIVINSYCLMHRVD 127
>ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 590
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/79 (44%), Positives = 53/79 (67%)
Frame = +2
Query: 5 FANNIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRV 184
F N N+ DAV+LF +MV M+P PSV+ F+QL +++ K Y +SLF++M I +
Sbjct: 44 FGVNSSNLDDAVTLFHQMVTMKPLPSVVHFSQLFKTMIKMKHYSGALSLFRQMLKLGIPI 103
Query: 185 DDVTLSVVINSFCLVGRVD 241
D L+++INS+CL+ RVD
Sbjct: 104 SDFILNIMINSYCLMYRVD 122
>ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 655
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/75 (45%), Positives = 54/75 (72%)
Frame = +2
Query: 17 IKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDVT 196
+K + DAV+LF +MV+M+P PSV++F++L ++ K Y V+SLF+EM I++D V
Sbjct: 113 LKCLDDAVNLFNQMVRMKPLPSVVDFSKLFKNMISMKHYSAVLSLFREMQKLGIQIDGVI 172
Query: 197 LSVVINSFCLVGRVD 241
L+ VINS+C++ R D
Sbjct: 173 LTSVINSYCMMHRAD 187
>ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Solanum lycopersicum]
Length = 590
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/76 (44%), Positives = 54/76 (71%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N N+ DAV+LF +MV M+P PSV++F++L +++ K Y ISLF++M I +++
Sbjct: 47 NSSNLDDAVTLFHQMVTMKPLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPINNF 106
Query: 194 TLSVVINSFCLVGRVD 241
LS++INS+CL+ RVD
Sbjct: 107 ILSIMINSYCLMCRVD 122
>ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 592
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/76 (44%), Positives = 54/76 (71%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N N+ DAV+LF +MV M+P PSV++F++L +++ K Y ISLF++M I +++
Sbjct: 49 NSSNLDDAVTLFHQMVTMKPLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPINNF 108
Query: 194 TLSVVINSFCLVGRVD 241
LS++INS+CL+ RVD
Sbjct: 109 ILSIMINSYCLMCRVD 124
>ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 589
Score = 76.3 bits (186), Expect = 4e-12
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +2
Query: 8 ANNIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVD 187
++N + + DAV+LF +MV M+P PSV++F++L ++ K Y VISLF++M I++D
Sbjct: 45 SSNFECLDDAVTLFHQMVTMKPLPSVVDFSKLFKNMISMKHYAAVISLFRQMQKLGIQID 104
Query: 188 DVTLSVVINSFCLVGRVD 241
+ L+ VINS+C++ R D
Sbjct: 105 GIILTSVINSYCMMHRAD 122
>ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565401693|ref|XP_006366330.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum]
Length = 590
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +2
Query: 5 FANNIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRV 184
F NI + DAV LF++MV M+ PS+++F++L ++ K Y V+SLF+EM I +
Sbjct: 44 FGVNINCLDDAVILFKQMVTMKRLPSLVDFSKLFKTMINMKHYSAVLSLFREMQKLGIPI 103
Query: 185 DDVTLSVVINSFCLVGRVD 241
D V L++VINS+CL+ RVD
Sbjct: 104 DGVILNIVINSYCLMHRVD 122
>ref|XP_004295770.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 459
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +2
Query: 17 IKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDVT 196
+ NV DA+ +F EM+Q RP PSV+ FTQ+L LV+ K Y V+SL +M S IR D T
Sbjct: 63 VSNVEDALEVFDEMLQRRPLPSVVRFTQVLAPLVKLKHYPTVLSLNSQMLLSGIRPDHYT 122
Query: 197 LSVVINSFCLVGRVDF 244
L++V+N +C + R+D+
Sbjct: 123 LAIVVNCYCRLNRMDY 138
>ref|XP_004295757.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 439
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 17 IKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDVT 196
+ NV DA+ LF EM+Q RP PSV+ FTQ+L LV+ K Y V+SL +M S IR + T
Sbjct: 63 VSNVDDALKLFDEMLQRRPLPSVVRFTQVLAPLVKLKHYPTVLSLNSQMLLSGIRPNHYT 122
Query: 197 LSVVINSFCLVGRVDF 244
L++VIN +C + R+D+
Sbjct: 123 LAIVINCYCRLNRMDY 138
>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+K + DA SLFR+MV+ +P PSV F++LL +V K Y V+SLF+E+ RI V +
Sbjct: 49 NVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEF 108
Query: 194 TLSVVINSFCLVGRVD 241
LS+V+NS CL+ R D
Sbjct: 109 ILSIVVNSCCLMHRTD 124
>ref|XP_004296297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 697
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +2
Query: 17 IKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDVT 196
+ NV DA+ +F EM+Q RP PSV+ FTQ+L LV+ K Y V+SL +M S I + T
Sbjct: 304 VSNVEDALKVFDEMLQRRPLPSVVRFTQILAPLVKLKHYATVLSLNSQMLLSGIASNSYT 363
Query: 197 LSVVINSFCLVGRVDF 244
LS+VIN +C + R+D+
Sbjct: 364 LSIVINCYCCLNRLDY 379
>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+K + DA SLFR+MV +P PS + F++LL LV K Y V+S+F+E+ RI VD
Sbjct: 49 NVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAF 108
Query: 194 TLSVVINSFCLVGRVD 241
LS V+NS CL+ R D
Sbjct: 109 ALSTVVNSCCLMHRTD 124
>ref|XP_006360465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 659
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
++ +++DAV +F ++V+ P PSV+EF +LL ++ K+Y VV+S F+EM I DD
Sbjct: 113 DVNSLNDAVCVFHQLVRKEPVPSVVEFAKLLRVMINMKEYSVVVSFFEEMRKLGIPFDDY 172
Query: 194 TLSVVINSFCLVG 232
L++VINSFCL+G
Sbjct: 173 ILTIVINSFCLLG 185
>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/77 (41%), Positives = 53/77 (68%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+ + DA+SLF M++MRP PS+++F++LL + K Y V+SL+K+M + I +
Sbjct: 31 NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 194 TLSVVINSFCLVGRVDF 244
TL+++INSFC + R+ F
Sbjct: 91 TLNILINSFCHLNRLGF 107
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +2
Query: 5 FANNIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRV 184
F + + DAVSLF MV+M+P PSVI+F++L ++ K Y V+SLF+EM I +
Sbjct: 36 FDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPI 95
Query: 185 DDVTLSVVINSFCLVGRVD 241
D L++V NS+CL R+D
Sbjct: 96 SDSILNIVTNSYCLRHRID 114
>ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 588
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +2
Query: 14 NIKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDV 193
N+K + DAV LF +MV M+P PS+++F++L ++ K Y V+SLF+EM I +++
Sbjct: 42 NVKCLDDAVILFTQMVTMKPLPSLVDFSKLFKTIIIMKHYSAVVSLFREMRKLGIPINEF 101
Query: 194 TLSVVINSFCLVGRVD 241
LS VINS+CL+ RV+
Sbjct: 102 ILSNVINSYCLMNRVE 117
>ref|XP_006389305.1| hypothetical protein POPTR_0030s00250g [Populus trichocarpa]
gi|550312065|gb|ERP48219.1| hypothetical protein
POPTR_0030s00250g [Populus trichocarpa]
Length = 611
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +2
Query: 2 GFANN---IKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNS 172
GF NN + +V+DAV+ F E++ MRP P V+EF +LL LV+ K Y VISL K+M S
Sbjct: 59 GFCNNYSTLHSVADAVASFNELLSMRPMPPVVEFNKLLGPLVKKKHYSTVISLCKQMDLS 118
Query: 173 RIRVDDVTLSVVINSFC 223
IR D TL+++IN FC
Sbjct: 119 NIRPDVYTLTILINCFC 135
>ref|XP_004298524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 605
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +2
Query: 17 IKNVSDAVSLFREMVQMRPSPSVIEFTQLLNRLVEFKQYLVVISLFKEMCNSRIRVDDVT 196
+ NV DA+ +F EM+ RP PSV+ FTQ+L LV+ K Y V+SL +M IR D T
Sbjct: 63 VSNVEDALKVFDEMLHRRPLPSVVRFTQILAPLVKLKHYPTVLSLNSQMLLCGIRPDHYT 122
Query: 197 LSVVINSFCLVGRVDF 244
L++V+N +C + R+++
Sbjct: 123 LAIVVNCYCRLNRMEY 138