BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00027398
         (981 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|5...   108   2e-21
gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus pe...   108   3e-21
ref|XP_002531056.1| conserved hypothetical protein [Ricinus comm...   108   3e-21
ref|XP_006469363.1| PREDICTED: mediator of RNA polymerase II tra...   107   5e-21
ref|XP_006384719.1| hypothetical protein POPTR_0004s20480g [Popu...   107   7e-21
ref|XP_006848548.1| hypothetical protein AMTR_s00169p00040710 [A...   107   9e-21
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   107   9e-21
ref|XP_004290106.1| PREDICTED: mediator of RNA polymerase II tra...   106   1e-20
gb|EOX96931.1| Mediator of RNA polymerase II transcription subun...   104   5e-20
gb|EOX96930.1| Mediator of RNA polymerase II transcription subun...   104   5e-20
gb|EOX96929.1| Mediator of RNA polymerase II transcription subun...   104   5e-20
ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244...   104   6e-20
emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera]   104   6e-20
gb|EOX93676.1| Mediator of RNA polymerase II transcription subun...   103   1e-19
ref|XP_004240443.1| PREDICTED: mediator of RNA polymerase II tra...   103   1e-19
gb|ESW30726.1| hypothetical protein PHAVU_002G177400g [Phaseolus...   102   3e-19
gb|ESW30725.1| hypothetical protein PHAVU_002G177400g [Phaseolus...   101   4e-19
ref|XP_002312859.2| hypothetical protein POPTR_0009s15800g [Popu...   101   4e-19
ref|XP_002873556.1| hypothetical protein ARALYDRAFT_488066 [Arab...   101   4e-19
ref|XP_004246249.1| PREDICTED: mediator of RNA polymerase II tra...   101   5e-19

>ref|XP_002328215.1| predicted protein [Populus trichocarpa]
           gi|566167583|ref|XP_006384718.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
           gi|550341486|gb|ERP62515.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
          Length = 220

 Score =  108 bits (271), Expect = 2e-21
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = -1

Query: 291 SGEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDEL 112
           SG +EL GAVDL+SH+KL PHHE FCKRS+ +S++++ YL NVVGD  IRKGEGM+LD+L
Sbjct: 9   SGPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQL 68

Query: 111 LHEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
           + + TS      +  F+LD LR+AF++ E T  D
Sbjct: 69  I-QNTSRDSNAHIEPFDLDVLREAFQLKETTPID 101


>gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus persica]
          Length = 217

 Score =  108 bits (270), Expect = 3e-21
 Identities = 53/93 (56%), Positives = 69/93 (74%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G KEL GAVDL+SHYKL PHHE FCKRS+ VS+S++ YL NVVGD  IRKG+GM+LD+L+
Sbjct: 11  GPKELTGAVDLISHYKLLPHHEFFCKRSLPVSISDTHYLHNVVGDTEIRKGDGMQLDQLI 70

Query: 108 HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
            + TS   + ++  F+LD LR+AF + E    D
Sbjct: 71  -QSTSYFSKPRIQPFDLDILREAFHLRETAPID 102


>ref|XP_002531056.1| conserved hypothetical protein [Ricinus communis]
           gi|223529351|gb|EEF31317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 292

 Score =  108 bits (270), Expect = 3e-21
 Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G KELCGAVDL++ +KLWPHHE FCKRS+ +SVS++ Y++NVVGD  IRKGEGMELD+L 
Sbjct: 138 GLKELCGAVDLVNQFKLWPHHEFFCKRSLPLSVSQTHYIQNVVGDTEIRKGEGMELDQLF 197

Query: 108 HEETSSGRQ--QQLPTFELDSLRDAFRITEMTSWDHS 4
           H  T   RQ    + TF+L  LR+AF + + T  D S
Sbjct: 198 H-NTPYMRQGKAHIHTFDLGVLREAFWMRDSTPIDLS 233


>ref|XP_006469363.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform X1 [Citrus sinensis]
           gi|568830137|ref|XP_006469364.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X2 [Citrus sinensis] gi|568830139|ref|XP_006469365.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 19a-like isoform X3 [Citrus sinensis]
           gi|568830141|ref|XP_006469366.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like isoform
           X4 [Citrus sinensis]
          Length = 219

 Score =  107 bits (268), Expect = 5e-21
 Identities = 51/93 (54%), Positives = 70/93 (75%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL+SHYKL PHH+ FCKRS+ +S+S++ YL NVVGD  IRKGEGM+LD+L+
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 70

Query: 108 HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
            + TS     ++  F+LD LR+AF++ E +  D
Sbjct: 71  -QNTSRDTSARIQPFDLDVLREAFQLRETSPVD 102


>ref|XP_006384719.1| hypothetical protein POPTR_0004s20480g [Populus trichocarpa]
           gi|566167587|ref|XP_006384720.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
           gi|550341487|gb|ERP62516.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
           gi|550341488|gb|ERP62517.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
          Length = 221

 Score =  107 bits (267), Expect = 7e-21
 Identities = 51/93 (54%), Positives = 69/93 (74%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL+SH+KL PHHE FCKRS+ +S++++ YL NVVGD  IRKGEGM+LD+L+
Sbjct: 11  GPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLI 70

Query: 108 HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
            + TS      +  F+LD LR+AF++ E T  D
Sbjct: 71  -QNTSRDSNAHIEPFDLDVLREAFQLKETTPID 102


>ref|XP_006848548.1| hypothetical protein AMTR_s00169p00040710 [Amborella trichopoda]
           gi|548851861|gb|ERN10129.1| hypothetical protein
           AMTR_s00169p00040710 [Amborella trichopoda]
          Length = 210

 Score =  107 bits (266), Expect = 9e-21
 Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -1

Query: 282 KELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELLH- 106
           +EL GAVDLL+HYKLW HH+ FCKRS+ +S+S++ YL NVVGD  IRKGEGMELD+L H 
Sbjct: 7   RELTGAVDLLNHYKLWAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFHT 66

Query: 105 EETSSGRQQQLPTFELDSLRDAFRITE 25
             T      ++  F+LD+LR AF++ E
Sbjct: 67  TSTLRNLDSRIRPFDLDTLRQAFQLRE 93


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  107 bits (266), Expect = 9e-21
 Identities = 53/96 (55%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
 Frame = -1

Query: 291 SGEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDEL 112
           SG +EL GAVDL+SH+KL PHHE FCKRS+ +S+S++ YL NVVGD  IRKG+GM+LD+L
Sbjct: 10  SGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDGMQLDQL 69

Query: 111 LHEETSSGRQQ--QLPTFELDSLRDAFRITEMTSWD 10
           + + TS  R    ++  F+LD LR+AF++ E T  D
Sbjct: 70  I-QNTSYSRDSNARIQPFDLDVLREAFQLKETTPID 104


>ref|XP_004290106.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Fragaria vesca subsp. vesca]
          Length = 218

 Score =  106 bits (265), Expect = 1e-20
 Identities = 50/93 (53%), Positives = 67/93 (72%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL++HYKL  HHE FCKRS+ VS+S++ Y+ NVVGD  IRKGEGM+LD+L+
Sbjct: 11  GPRELTGAVDLITHYKLHAHHEFFCKRSLPVSISDTHYIYNVVGDTEIRKGEGMQLDQLI 70

Query: 108 HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
               S   + ++  F+LDSLR+AF+  E    D
Sbjct: 71  QSTYSRDTKPRIQPFDLDSLREAFQFKETAPVD 103


>gb|EOX96931.1| Mediator of RNA polymerase II transcription subunit 19 isoform 3
           [Theobroma cacao]
          Length = 245

 Score =  104 bits (260), Expect = 5e-20
 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G KEL GAVDL+  +KLWPHHE FCKR + +S+SE+ Y+RNVVGD  IRKG+GMELD+L 
Sbjct: 68  GPKELGGAVDLIKKFKLWPHHEFFCKRPLPLSISETTYIRNVVGDTEIRKGKGMELDQLF 127

Query: 108 -HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
            +   S GR   +  F+LD L +AF++ E    D
Sbjct: 128 PNASDSRGRNLSIGPFDLDLLGEAFQMRESACVD 161


>gb|EOX96930.1| Mediator of RNA polymerase II transcription subunit 19 isoform 2,
           partial [Theobroma cacao]
          Length = 252

 Score =  104 bits (260), Expect = 5e-20
 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G KEL GAVDL+  +KLWPHHE FCKR + +S+SE+ Y+RNVVGD  IRKG+GMELD+L 
Sbjct: 50  GPKELGGAVDLIKKFKLWPHHEFFCKRPLPLSISETTYIRNVVGDTEIRKGKGMELDQLF 109

Query: 108 -HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
            +   S GR   +  F+LD L +AF++ E    D
Sbjct: 110 PNASDSRGRNLSIGPFDLDLLGEAFQMRESACVD 143


>gb|EOX96929.1| Mediator of RNA polymerase II transcription subunit 19 isoform 1
           [Theobroma cacao]
          Length = 309

 Score =  104 bits (260), Expect = 5e-20
 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G KEL GAVDL+  +KLWPHHE FCKR + +S+SE+ Y+RNVVGD  IRKG+GMELD+L 
Sbjct: 68  GPKELGGAVDLIKKFKLWPHHEFFCKRPLPLSISETTYIRNVVGDTEIRKGKGMELDQLF 127

Query: 108 -HEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
            +   S GR   +  F+LD L +AF++ E    D
Sbjct: 128 PNASDSRGRNLSIGPFDLDLLGEAFQMRESACVD 161


>ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244629 [Vitis vinifera]
           gi|297740784|emb|CBI30966.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  104 bits (259), Expect = 6e-20
 Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL++HYKL PHHE FCKRS+ +S+SE+ YLR+VVG   IRKGEGMELD+L 
Sbjct: 11  GPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGGTEIRKGEGMELDQLF 70

Query: 108 HEE-TSSGRQQQLPTFELDSLRDAFRITEMT 19
           H       R   +  F+LD LR+AF++ E T
Sbjct: 71  HSTFYLRERNAGIHPFDLDILREAFQMRETT 101


>emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera]
          Length = 316

 Score =  104 bits (259), Expect = 6e-20
 Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL++HYKL PHHE FCKRS+ +S+SE+ YLR+VVG   IRKGEGMELD+L 
Sbjct: 49  GPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGXTEIRKGEGMELDQLF 108

Query: 108 HEE-TSSGRQQQLPTFELDSLRDAFRITEMT 19
           H       R   +  F+LD LR+AF++ E T
Sbjct: 109 HSTFYLRERNAGIHPFDLDILREAFQMRETT 139


>gb|EOX93676.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
           cacao]
          Length = 221

 Score =  103 bits (256), Expect = 1e-19
 Identities = 50/92 (54%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL+SHYKL PHH+ FCKR + +S+S++ YL NVVGD  IRKGEGM+LD+L+
Sbjct: 11  GPRELSGAVDLISHYKLLPHHDFFCKRPLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 70

Query: 108 HEETSSGR--QQQLPTFELDSLRDAFRITEMT 19
            + TS  R    ++  F+LD L++AF++ E T
Sbjct: 71  -QNTSHNRDTNARIQPFDLDILKEAFQLREST 101


>ref|XP_004240443.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Solanum lycopersicum]
          Length = 212

 Score =  103 bits (256), Expect = 1e-19
 Identities = 49/91 (53%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
 Frame = -1

Query: 282 KELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELLHE 103
           +EL GAVDL++HYKL PHHE FCK+ + +S+S++ YL NVVGD+ IRKGEGM+LD+L+H+
Sbjct: 16  RELAGAVDLINHYKLLPHHEYFCKKPLPLSISDTRYLHNVVGDREIRKGEGMQLDQLIHD 75

Query: 102 -----ETSSGRQQQLPTFELDSLRDAFRITE 25
                ET+S    ++  FELD+L +AF++ E
Sbjct: 76  TSFLKETNS----RIQPFELDALNEAFQLRE 102


>gb|ESW30726.1| hypothetical protein PHAVU_002G177400g [Phaseolus vulgaris]
          Length = 231

 Score =  102 bits (253), Expect = 3e-19
 Identities = 46/91 (50%), Positives = 66/91 (72%)
 Frame = -1

Query: 291 SGEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDEL 112
           +G +EL G  DL++ Y+LWP++E FCK+ + VS+SE+ YLRNVVGD ++RKGEGMELD+L
Sbjct: 41  NGNRELGGTRDLINQYRLWPYYEFFCKKPLPVSISETHYLRNVVGDTKVRKGEGMELDQL 100

Query: 111 LHEETSSGRQQQLPTFELDSLRDAFRITEMT 19
                 S ++  L  F+LD L +AF + EM+
Sbjct: 101 CQNPEPSEKKASLCPFDLDLLSEAFHLKEMS 131


>gb|ESW30725.1| hypothetical protein PHAVU_002G177400g [Phaseolus vulgaris]
          Length = 200

 Score =  101 bits (252), Expect = 4e-19
 Identities = 46/90 (51%), Positives = 65/90 (72%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL G  DL++ Y+LWP++E FCK+ + VS+SE+ YLRNVVGD ++RKGEGMELD+L 
Sbjct: 11  GNRELGGTRDLINQYRLWPYYEFFCKKPLPVSISETHYLRNVVGDTKVRKGEGMELDQLC 70

Query: 108 HEETSSGRQQQLPTFELDSLRDAFRITEMT 19
                S ++  L  F+LD L +AF + EM+
Sbjct: 71  QNPEPSEKKASLCPFDLDLLSEAFHLKEMS 100


>ref|XP_002312859.2| hypothetical protein POPTR_0009s15800g [Populus trichocarpa]
           gi|550331827|gb|EEE86814.2| hypothetical protein
           POPTR_0009s15800g [Populus trichocarpa]
          Length = 218

 Score =  101 bits (252), Expect = 4e-19
 Identities = 50/94 (53%), Positives = 69/94 (73%)
 Frame = -1

Query: 291 SGEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDEL 112
           SG +EL GAVDL+SHYKL PH+E FCKRS+ +S++++ YL NVVGD  IRKGE M+LD+L
Sbjct: 9   SGPRELTGAVDLISHYKLLPHYEYFCKRSLPLSIADTHYLHNVVGDTEIRKGERMQLDQL 68

Query: 111 LHEETSSGRQQQLPTFELDSLRDAFRITEMTSWD 10
           + + TS      +  F+L+ LR+AF++ E T  D
Sbjct: 69  I-QNTSRDSNACIQPFDLNVLREAFQLKETTPID 101


>ref|XP_002873556.1| hypothetical protein ARALYDRAFT_488066 [Arabidopsis lyrata subsp.
           lyrata] gi|297319393|gb|EFH49815.1| hypothetical protein
           ARALYDRAFT_488066 [Arabidopsis lyrata subsp. lyrata]
          Length = 221

 Score =  101 bits (252), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G KELCGA DL+S +KL  HHE FCK+S+ VS+S+S YL NVVGD  IRKGEGM+LD+L+
Sbjct: 10  GPKELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 108 HEETSSGRQQ-QLPTFELDSLRDAFRITEMT 19
              + S     ++  F++D L+++F++ +MT
Sbjct: 70  QSISQSRETNVRIQPFDIDELKESFQLNDMT 100


>ref|XP_004246249.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform 2 [Solanum lycopersicum]
          Length = 186

 Score =  101 bits (251), Expect = 5e-19
 Identities = 51/95 (53%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
 Frame = -1

Query: 288 GEKELCGAVDLLSHYKLWPHHEIFCKRSVAVSVSESPYLRNVVGDKRIRKGEGMELDELL 109
           G +EL GAVDL+SH+KL PH E FCKRS+ +S+S++ YL NVVGD  IRKGEGM+LD+L+
Sbjct: 11  GPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLI 70

Query: 108 HEETSSGRQQQ--LPTFELDSLRDAFRITEMTSWD 10
            ++TS  R+    +  F+LD L +AFR+ E    D
Sbjct: 71  -QDTSLSRETSSCIQPFDLDVLGEAFRLREAAPVD 104