BLASTX nr result

ID: Catharanthus22_contig00027167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00027167
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356280.1| PREDICTED: B3 domain-containing protein REM9...    65   7e-09
ref|XP_004237741.1| PREDICTED: B3 domain-containing protein REM9...    65   7e-09

>ref|XP_006356280.1| PREDICTED: B3 domain-containing protein REM9-like [Solanum
           tuberosum]
          Length = 255

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = -1

Query: 330 SDFVKMICKYNVT-RSPSLYIPGRICRKYHITERTVVSLRGPSGKSYEVEIKSYSMNR-- 160
           S+F   I +YNV  RSP ++IP   C+   + + T ++L GPSGKS  V ++  +  +  
Sbjct: 152 SEFTARIKEYNVRKRSPYMHIPTEFCQSNALFQNTTMTLTGPSGKSCPVSLRICNGGKTL 211

Query: 159 -LCMRDGWTEFIKCYNIKAGDVCHFRIIRTDTQASSQNKVMMDVDI 25
             C+  GW +F     +K GDVC F++   D   S  N + +DV +
Sbjct: 212 YACITRGWHDFFSSNKLKVGDVCIFQL---DRSKSDSNSIAIDVRV 254


>ref|XP_004237741.1| PREDICTED: B3 domain-containing protein REM9-like [Solanum
           lycopersicum]
          Length = 255

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = -1

Query: 330 SDFVKMICKYNVT-RSPSLYIPGRICRKYHITERTVVSLRGPSGKSYEVEIKSYSMNR-- 160
           S+F   I +YNV  RSP ++IP   C+   + + T ++L GPSGKS  V ++  +  +  
Sbjct: 152 SEFTARIKEYNVRKRSPYMHIPTEFCQSNALFQNTTMTLTGPSGKSCPVSLRICNGGKTL 211

Query: 159 -LCMRDGWTEFIKCYNIKAGDVCHFRIIRTDTQASSQNKVMMDVDI 25
             C+  GW +F     +K GDVC F++   D   S  N + +DV +
Sbjct: 212 YACITRGWHDFFSSNKLKVGDVCLFQL---DRSKSDSNSIAIDVRV 254


Top