BLASTX nr result

ID: Catharanthus22_contig00026711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00026711
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    65   9e-09
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    59   5e-07
ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus...    57   2e-06

>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 13/91 (14%)
 Frame = +1

Query: 7   LEGRNSNSLK*LELDLIQEYKSISKEEEIYWYQRAREKWLTEGEHNTKFLHTLVVAKRAR 186
           LE   +++L   E +LI+E+  + ++EE+ W+Q++REKW+  G+ NTK+ HT+ V +R R
Sbjct: 723 LEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRR 782

Query: 187 RHI-------------LQTLKQIAMDFYAKL 240
             I              Q L+++A+D+Y++L
Sbjct: 783 NRIEMLKADDGSWVSQQQELEKMAVDYYSRL 813


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 13/91 (14%)
 Frame = +1

Query: 7   LEGRNSNSLK*LELDLIQEYKSISKEEEIYWYQRAREKWLTEGEHNTKFLHTLVVAKRAR 186
           LE   ++ L   E  LI+E++ + ++EEI W+Q++REKW+  G+ NTK+ HT  + +R R
Sbjct: 279 LEHNQTDDLLNKEDVLIKEFEVVLEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRR 338

Query: 187 RHI-------------LQTLKQIAMDFYAKL 240
             I              + L ++A+++Y KL
Sbjct: 339 NQIEMLKDDEGKWVEEPEELAKMAVEYYQKL 369


>ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus sinensis]
          Length = 809

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/65 (40%), Positives = 41/65 (63%)
 Frame = +1

Query: 1   RALEGRNSNSLK*LELDLIQEYKSISKEEEIYWYQRAREKWLTEGEHNTKFLHTLVVAKR 180
           + LE ++  SL  LEL L +E + I  +EEI W Q++R++WL +G+ NT + H   +A+R
Sbjct: 546 KVLETKSRRSLARLELKLKKELEEILTQEEILWLQKSRKEWLIQGDRNTAYFHQKTLARR 605

Query: 181 ARRHI 195
            R  I
Sbjct: 606 RRNRI 610


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