BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00026639
         (949 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    89   5e-31
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    91   4e-29
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   6e-29
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               77   1e-28
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe...    80   3e-26
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              75   8e-26
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              75   8e-26
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    82   8e-26
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    80   1e-25
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    75   4e-25
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              74   1e-24
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A...    68   3e-22
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    80   1e-21
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   5e-21
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...    68   3e-20
gb|EOY32757.1| Uncharacterized protein TCM_040787 [Theobroma cacao]    75   3e-20
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]    74   4e-20
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    89   5e-20
gb|EMJ04271.1| hypothetical protein PRUPE_ppa023514mg [Prunus pe...    50   4e-19
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   9e-19

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 89.0 bits (219), Expect(2) = 5e-31
 Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
 Frame = -1

Query: 559 IHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGK----------------E 428
           +HS+ RK GRKG M +K+DLEKAYDR  W FL++ L+A G  +                 
Sbjct: 421 VHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSV 480

Query: 427 LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQLMK 296
           LWNG +  SF    GL+QGDPLS YLFVLC+E L   I   + K
Sbjct: 481 LWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGK 524



 Score = 73.2 bits (178), Expect(2) = 5e-31
 Identities = 38/102 (37%), Positives = 55/102 (53%)
 Frame = -3

Query: 308 AVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQ 129
           +V +  W P+  S G   +SH+ FADDLILF +ASV    ++  +++ FC    QK +++
Sbjct: 521 SVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLE 580

Query: 128 KSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           KSK+F S N        +    GI  +  LG YLGM I   R
Sbjct: 581 KSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKR 622


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 90.5 bits (223), Expect(2) = 4e-29
 Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 16/105 (15%)
 Frame = -1

Query: 559 IHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKE---------------- 428
           +HS+ RK GRKG M +K+DLEKAYDR  W FL + L+A G  +                 
Sbjct: 373 VHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSL 432

Query: 427 LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQLMKG 293
           LWNG K  SF  E GL+QGDP+S YLFVLC+E L   I   + +G
Sbjct: 433 LWNGEKTDSFTPERGLRQGDPISPYLFVLCIERLCHQIETAVGRG 477



 Score = 65.5 bits (158), Expect(2) = 4e-29
 Identities = 38/102 (37%), Positives = 52/102 (50%)
 Frame = -3

Query: 308 AVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQ 129
           AV  G W  ++ S+G P +SH+ FADDLILF +ASV                  QK +++
Sbjct: 473 AVGRGDWKSISISQGGPKVSHVCFADDLILFAEASV-----------------AQKVSLE 515

Query: 128 KSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           KSK+F S N      G +    GI ++  LG YLGM +   R
Sbjct: 516 KSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKR 557



 Score = 45.8 bits (107), Expect(2) = 4e-06
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -2

Query: 777 EIKAVLFQMGGLKAPGPDGL-PFFFKKNWHIVGDAVVKFIERAFEQG 640
           E+   +  MG  KAPGPDG  P F+++ W  VG++V KF+   FE G
Sbjct: 248 EVVVAVRSMGRFKAPGPDGYQPVFYQQCWETVGESVSKFVMEFFESG 294



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 949 LKDDRGDWIDNEEELREMAREFYSNLYKIEQCIPIENT 836
           LKD    W+  +E L ++A ++Y  LY +E    +  T
Sbjct: 186 LKDSEDRWVTEKEALEKLAMDYYRKLYSLEDVSVVRGT 223


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 79.3 bits (194), Expect(2) = 6e-29
 Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 16/106 (15%)
 Frame = -1

Query: 562 LIHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKEL-------------- 425
           + HS+  K G+KG MA+K+D EKAYDR  W F+ + L  +   + L              
Sbjct: 563 MFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFIRESLMELRIPQHLVDIVMNCVSSANLQ 622

Query: 424 --WNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQLMKG 293
             WNG  +       GL+QGDPLS YL+V+CME L   I +++  G
Sbjct: 623 ILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLIDQEVTNG 668



 Score = 75.9 bits (185), Expect(2) = 6e-29
 Identities = 41/104 (39%), Positives = 58/104 (55%)
 Frame = -3

Query: 314 NKAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNN 135
           ++ V  G W PV  SR  P IS++ FADDLILF +ASV+ A +M   +  FC     K N
Sbjct: 662 DQEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVN 721

Query: 134 IQKSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
             KSK++ S NT       + +   + A+A+ G YLG+   +GR
Sbjct: 722 EDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGR 765


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 77.4 bits (189), Expect(2) = 1e-28
 Identities = 36/79 (45%), Positives = 55/79 (69%)
 Frame = -3

Query: 311 KAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNI 132
           +++N  +W P+N SRG P +SHI FADDLILF +ASV+   ++  ++++FC    QK ++
Sbjct: 97  RSINAKQWKPINLSRGGPKLSHICFADDLILFAEASVEQVQIVRRVLEAFCTASGQKVSL 156

Query: 131 QKSKLFVSQNTKPRTTGKL 75
           +KSK+F S+N   R  GKL
Sbjct: 157 EKSKIFFSKNVS-RELGKL 174



 Score = 76.6 bits (187), Expect(2) = 1e-28
 Identities = 45/97 (46%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
 Frame = -1

Query: 544 RKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKE----------------LWNGS 413
           RK G KG M +K+DLEKAYDR  W FL   L A GF +                 LWNG 
Sbjct: 3   RKKGSKGWMLLKLDLEKAYDRIRWDFLSDTLVAAGFSEVWVTWIMQCVSGPDMSLLWNGE 62

Query: 412 KLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQL 302
           K   F    GL+QGD LS YLFVLCME L   I + +
Sbjct: 63  KTTPFKPLRGLRQGDLLSPYLFVLCMERLCHLIERSI 99


>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
          Length = 993

 Score = 80.5 bits (197), Expect(2) = 3e-26
 Identities = 41/102 (40%), Positives = 55/102 (53%)
 Frame = -3

Query: 308  AVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQ 129
            AV    W P+ TSR  P +SH+FFADDL LF +A+   A +M   +  FC    Q  N  
Sbjct: 872  AVKRKLWKPIKTSRNGPSVSHLFFADDLALFAEATPCQARVMKNCLDLFCSASGQAVNFA 931

Query: 128  KSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
            KS +F S NT      ++  + G P + NLG YLG+ + H R
Sbjct: 932  KSVIFCSPNTCKMVAKEIGAICGSPITENLGKYLGLPLLHSR 973



 Score = 65.5 bits (158), Expect(2) = 3e-26
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
 Frame = -1

Query: 562  LIHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKEL-------------- 425
            L+H      G+K   A K+DL KAYDR +W F+E VL  VG                   
Sbjct: 771  LMHKFKLAKGKKRMFAWKIDLSKAYDRLNWGFIESVLLEVGLPNSFIQLIMQCVSTMRYQ 830

Query: 424  --WNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAI 314
               NG     F+   G++QGDPLS YLFVLC+E L   I
Sbjct: 831  ICINGELTDPFSPGNGIRQGDPLSPYLFVLCIEKLSHII 869


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 74.7 bits (182), Expect(2) = 8e-26
 Identities = 40/101 (39%), Positives = 55/101 (54%)
 Frame = -3

Query: 305 VNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQK 126
           VN   W PV+ +RG   ISH+FFADDL+LFG+AS   A +M + + SF      K N  K
Sbjct: 663 VNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSK 722

Query: 125 SKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           S LF S N        +  +  +P + +LG YLG+ +   R
Sbjct: 723 SLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKER 763



 Score = 70.1 bits (170), Expect(2) = 8e-26
 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 20/116 (17%)
 Frame = -1

Query: 601 SFLNKRGRKTGLFL----IHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFG 434
           SFL  R     + L    +HS+     +K  M +KVDL+KAYD   W +LE+ L+  GF 
Sbjct: 544 SFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFGFP 603

Query: 433 KE----------------LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAI 314
           +                 LWNG +L  F    GL+QGDPL+ YLF L ME L   I
Sbjct: 604 RRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDI 659


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 74.7 bits (182), Expect(2) = 8e-26
 Identities = 40/101 (39%), Positives = 55/101 (54%)
 Frame = -3

Query: 305 VNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQK 126
           VN   W PV+ +RG   ISH+FFADDL+LFG+AS   A +M + + SF      K N  K
Sbjct: 663 VNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSK 722

Query: 125 SKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           S LF S N        +  +  +P + +LG YLG+ +   R
Sbjct: 723 SLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKER 763



 Score = 70.1 bits (170), Expect(2) = 8e-26
 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 20/116 (17%)
 Frame = -1

Query: 601 SFLNKRGRKTGLFL----IHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFG 434
           SFL  R     + L    +HS+     +K  M +KVDL+KAYD   W +LE+ L+  GF 
Sbjct: 544 SFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFGFP 603

Query: 433 KE----------------LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAI 314
           +                 LWNG +L  F    GL+QGDPL+ YLF L ME L   I
Sbjct: 604 RRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDI 659


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 81.6 bits (200), Expect(2) = 8e-26
 Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
 Frame = -1

Query: 601 SFLNKRGRKTGLF----LIHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFG 434
           SFL  RG          ++H + R   +KG +A K+DLEKA+D  +W FL   L+  GF 
Sbjct: 102 SFLQGRGTSDNSIVLQEIVHFMRRSKRKKGYVAFKLDLEKAFDNVNWEFLRSCLQDFGFP 161

Query: 433 KE----------------LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQL 302
            +                LWNG+K        GL+QGDPLS YLF++CME L  AI K +
Sbjct: 162 DDTIKLIMHCVTSSTFSVLWNGNKWPPIKPTHGLRQGDPLSPYLFIICMEKLSLAINKAV 221

Query: 301 MKG 293
            +G
Sbjct: 222 HEG 224



 Score = 63.2 bits (152), Expect(2) = 8e-26
 Identities = 37/104 (35%), Positives = 53/104 (50%)
 Frame = -3

Query: 314 NKAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNN 135
           NKAV+EG W P+  S   P +SH+ FADD++LF  A       + ++   F      K N
Sbjct: 218 NKAVHEGEWEPIRMSASSPPLSHLLFADDVLLFTKAKNSQLRFIKDLFDRFSKALGLKIN 277

Query: 134 IQKSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           + KS+ F S     +    L  + GI ++ +LG YLG  I  GR
Sbjct: 278 LSKSRAFYS-GVPHQKIINLTSISGIRSTTSLGKYLGFPILKGR 320


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 80.1 bits (196), Expect(2) = 1e-25
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
 Frame = -1

Query: 601 SFLNKRGRKTGLFLI----HSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFG 434
           SFL  RG      ++    H + R   +KG +A K+DLEKA+D  +W FL   L   GF 
Sbjct: 542 SFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFLNSCLLDFGFP 601

Query: 433 ----------------KELWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQL 302
                             LWNG+K+  F    GL+QGDPLS YLF+LCME L  AI   +
Sbjct: 602 DIIVKLIMHCVSSANYSLLWNGNKMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQDAV 661

Query: 301 MKG 293
           ++G
Sbjct: 662 LQG 664



 Score = 63.9 bits (154), Expect(2) = 1e-25
 Identities = 35/102 (34%), Positives = 49/102 (48%)
 Frame = -3

Query: 308 AVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQ 129
           AV +G W P++     P ISH+ FADD++LF  A       +T +   F      K NI 
Sbjct: 660 AVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKSSQLQFITNLFDRFSRASGLKINIS 719

Query: 128 KSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           KS+ + S  T       L  + GI ++  LG YLG  +  GR
Sbjct: 720 KSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGR 761


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 75.1 bits (183), Expect(2) = 4e-25
 Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 16/89 (17%)
 Frame = -1

Query: 520 MAIKVDLEKAYDRADWRFLEKVLKAVGFGKEL----------------WNGSKLHSFALE 389
           M IK+DLEKAYD  +W F+E+ LK   F  +L                WNG K  SF   
Sbjct: 1   MTIKIDLEKAYDLLNWNFVEECLKECKFPSKLINIIHHCISTPSYKIMWNGDKSESFYPS 60

Query: 388 WGLKQGDPLSSYLFVLCMELLGQAITKQL 302
            G++QGDPLS YLFV+CME L   I  Q+
Sbjct: 61  RGIRQGDPLSPYLFVICMERLSHIIADQV 89



 Score = 67.4 bits (163), Expect(2) = 4e-25
 Identities = 35/96 (36%), Positives = 52/96 (54%)
 Frame = -3

Query: 290 WMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQKSKLFV 111
           W P+   R  P ISH+ FADDL+LF +AS++ A  +   +  FC    QK N +K++++ 
Sbjct: 94  WKPMRAGRYGPPISHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYF 153

Query: 110 SQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           S+N        +    G     +LG YLG +IT GR
Sbjct: 154 SKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGR 189


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 74.3 bits (181), Expect(2) = 1e-24
 Identities = 40/101 (39%), Positives = 55/101 (54%)
 Frame = -3

Query: 305  VNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQK 126
            VN   W PV+ +RG   ISH+FFADDL+LFG+AS   A +M + + SF      K N  K
Sbjct: 1195 VNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSK 1254

Query: 125  SKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
            S LF S N        +  +  +P + +LG YLG+ +   R
Sbjct: 1255 SLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKER 1295



 Score = 66.2 bits (160), Expect(2) = 1e-24
 Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 20/116 (17%)
 Frame = -1

Query: 601  SFLNKRGRKTGLFL----IHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFG 434
            SFL  R     + L    +HS+     +K  M +KVDL+KAYD   W +LE+ L+  GF 
Sbjct: 1076 SFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSVSWDYLEETLEDFGFP 1135

Query: 433  KE----------------LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAI 314
            +                 LWNG +   F    GL+QGDPL  YLF L ME L   I
Sbjct: 1136 RRLIDLILFSLQESSLAILWNGGRPPPFKPGRGLRQGDPLVPYLFNLVMERLAHDI 1191


>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 768

 Score = 67.8 bits (164), Expect(2) = 3e-22
 Identities = 32/106 (30%), Positives = 55/106 (51%)
 Frame = -3

Query: 320 GYNKAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQK 141
           G  +++++  W P+  SR    +SH+FF DDL+LF +A+   A  +  ++  FC     K
Sbjct: 84  GIYQSIHQDHWKPIRLSRLGTPLSHLFFTDDLLLFAEATSGQAQCINSVLGDFCLSSGTK 143

Query: 140 NNIQKSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
            N  K+ ++ S+N       ++    G   + +LG YLGM + H R
Sbjct: 144 VNQSKTHVYFSKNVPDAVATRIWRDLGYTVTKDLGKYLGMPLLHSR 189



 Score = 64.7 bits (156), Expect(2) = 3e-22
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
 Frame = -1

Query: 520 MAIKVDLEKAYDRADWRFLEKVLKAVGFG----------------KELWNGSKLHSFALE 389
           MAIKVDLEKAYDR  W F+ + L  +                     LW+G     F+  
Sbjct: 1   MAIKVDLEKAYDRLSWNFIYETLTELALPIGLIQLIMECITSTSMNILWHGELTDDFSPS 60

Query: 388 WGLKQGDPLSSYLFVLCMELLGQAITKQL 302
            G++QGDPLS Y+FVLC+E L   I + +
Sbjct: 61  RGVRQGDPLSPYIFVLCVERLSHGIYQSI 89


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 79.7 bits (195), Expect(2) = 1e-21
 Identities = 42/102 (41%), Positives = 60/102 (58%)
 Frame = -3

Query: 308 AVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQ 129
           AV    W P++ SRG P +SHI FADDLILF +ASV    ++ ++++ FC    QK +++
Sbjct: 113 AVGTKEWKPISMSRGGPLLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLE 172

Query: 128 KSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           KSK+F SQN        +    GI ++  LG YLGM +   R
Sbjct: 173 KSKIFFSQNVHRDLEKFISDESGIKSTKELGKYLGMPVLQKR 214



 Score = 50.8 bits (120), Expect(2) = 1e-21
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = -1

Query: 427 LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELL 326
           LWNG K  SF    GL+QGDPLS YLFVLC+E L
Sbjct: 73  LWNGEKTESFIPSRGLRQGDPLSPYLFVLCLERL 106


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 72.8 bits (177), Expect(2) = 5e-21
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 16/96 (16%)
 Frame = -1

Query: 532 RKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKEL----------------WNGSKLHS 401
           ++  MA+K+DL KAYD  +W F+ + L+   F + L                WNG    S
Sbjct: 571 KRNIMALKIDLSKAYDSLEWGFIRETLQGFNFPQSLIALIMDCISSPAISLIWNGEVTQS 630

Query: 400 FALEWGLKQGDPLSSYLFVLCMELLGQAITKQLMKG 293
           F+   G++QGDPLS Y+FVLCME L   I+ ++  G
Sbjct: 631 FSPSRGIRQGDPLSPYIFVLCMERLSMLISDRIRDG 666



 Score = 55.8 bits (133), Expect(2) = 5e-21
 Identities = 29/97 (29%), Positives = 47/97 (48%)
 Frame = -3

Query: 305 VNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQK 126
           + +G W P+  S     +SHIF+ADD+ LFG ASV+   ++  +++ F      + N+ K
Sbjct: 663 IRDGSWKPIKISSDL-GVSHIFYADDVFLFGQASVRNGGVIQNVLEEFGNISGLRVNMSK 721

Query: 125 SKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSI 15
           S         P+    L     +  S + G YLG +I
Sbjct: 722 SLAIFPPKMNPQRRRMLADFLTMKGSTSFGKYLGCNI 758



 Score = 53.9 bits (128), Expect(3) = 7e-09
 Identities = 28/47 (59%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = -2

Query: 783 EPEIKAVLFQMGGLKAPGPDGL-PFFFKKNWHIVGDAVVKFIERAFE 646
           E EIK  L QM  LK+PGPDG+  FFFKK W  +G +VV  I RAFE
Sbjct: 435 EDEIKEALAQMAPLKSPGPDGIQAFFFKKYWEQMGPSVVSLIIRAFE 481



 Score = 29.6 bits (65), Expect(3) = 7e-09
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 949 LKDDRGDWIDNEEELREMAREFYSNLYKIEQCIPIENTEF 830
           LK+D  DW+ N E+L++M    +  ++         N  F
Sbjct: 376 LKNDNHDWVSNNEDLKKMMMSHFEKIFTTSMYSHQRNNSF 415



 Score = 23.1 bits (48), Expect(3) = 7e-09
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 632 PNSMNESLIAFIPKQEGP 579
           P+ +++S +A IPK E P
Sbjct: 486 PSGLSDSFLALIPKIESP 503


>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 719

 Score = 67.8 bits (164), Expect(2) = 3e-20
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
 Frame = -1

Query: 562 LIHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKEL-------------- 425
           L+    +  G  G  A KVDL KAYDR  W F+E++L    F   L              
Sbjct: 172 LLFKFKKSCGSLGFFAWKVDLSKAYDRLRWSFIEQILFEAKFPSTLVKLIMSCITTTSFQ 231

Query: 424 --WNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQLMKG 293
             +NG    SF  + G++QGDPLS Y+FVLCME L   I   +  G
Sbjct: 232 ICFNGELTSSFKAQRGIRQGDPLSPYIFVLCMEKLSHLINSVVDMG 277



 Score = 58.2 bits (139), Expect(2) = 3e-20
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = -3

Query: 314 NKAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFC 159
           N  V+ G W PV  S+  P +SH+FFADDL+LF +AS + AS++ + + SFC
Sbjct: 271 NSVVDMGYWKPVRASQSGPKVSHLFFADDLMLFAEASPQQASIIKDCLDSFC 322


>gb|EOY32757.1| Uncharacterized protein TCM_040787 [Theobroma cacao]
          Length = 178

 Score = 75.5 bits (184), Expect(2) = 3e-20
 Identities = 38/104 (36%), Positives = 58/104 (55%)
 Frame = -3

Query: 314 NKAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNN 135
           N+ V+ G W P+  +   P ++H+ FADDL+LFG+ASVK    +  ++  FC    QK +
Sbjct: 56  NEEVSLGNWKPLVVTTRGPYLTHVCFADDLMLFGEASVKQVQTIMRVLDKFCLASGQKVS 115

Query: 134 IQKSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           ++KS++ VS N        L     IP + + G YLG  + HGR
Sbjct: 116 LEKSRMLVSSNVPLSKARVLSSDAKIPLTKDFGKYLGSPVIHGR 159



 Score = 50.4 bits (119), Expect(2) = 3e-20
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = -1

Query: 427 LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQLMKG 293
           +WNG    +F    G++QGDPLS YLFVLC+E L Q + +++  G
Sbjct: 18  IWNGIPTETFIPTRGIRQGDPLSPYLFVLCLETLSQLVNEEVSLG 62


>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
          Length = 996

 Score = 73.9 bits (180), Expect(3) = 4e-20
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 25/118 (21%)
 Frame = -1

Query: 547 WRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKE----LW------------NG 416
           W+K G +G +  K+D+EKAYD  +W+FL KV++ +GFG      +W            NG
Sbjct: 414 WQKRGERG-LICKLDIEKAYDSLNWQFLMKVMRKMGFGSRWLGWMWRCISTAKFSVLVNG 472

Query: 415 SKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITKQL---------MKGGGCQSTHL 269
                F    GL+QGDPLS YLFV+ ME+L   I + +         ++GGG Q  H+
Sbjct: 473 VSAGFFPSSKGLRQGDPLSPYLFVMGMEVLSTLIRRAVEGGFLSGCRIQGGGRQPVHV 530



 Score = 40.4 bits (93), Expect(3) = 4e-20
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -2

Query: 807 EKYKQNGVEPEIKAVLFQMGGLKAPGPDGLPF-FFKKNWHIVGDAVVKFIERAFEQGGF 634
           E  +Q   E EI +   +M G KAPGPDG    F+++ W IV + V++  +  +EQ  F
Sbjct: 320 ENLEQPFSEEEIHSAPMEMNGDKAPGPDGFSMAFWQRCWVIVKEEVLEMFKEFYEQSVF 378



 Score = 31.2 bits (69), Expect(3) = 4e-20
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = -3

Query: 254 ISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNIQKSKLFVSQNTK--PRTTG 81
           +SH+ FADD I+F +A  +  + ++ I+  F      + N++KSKL      +       
Sbjct: 530 VSHLLFADDTIVFCEARKEYLAYLSWIMFWFEAASGLRINLEKSKLIPVGEVEEMEELAA 589

Query: 80  KLHHMFGIPASANLGLYLG 24
           +L    G   S  LGL LG
Sbjct: 590 ELGCKVGSMPSVYLGLPLG 608


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 970

 Score = 89.0 bits (219), Expect(2) = 5e-20
 Identities = 47/94 (50%), Positives = 56/94 (59%), Gaps = 16/94 (17%)
 Frame = -1

Query: 559 IHSIWRKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGK----------------E 428
           +HS+ RK GRKG M +K+DLEKAYDR  W FL++ L A G  +                 
Sbjct: 271 VHSMRRKKGRKGWMLLKLDLEKAYDRIRWNFLQETLVATGLSEVWTHRIMAGVTDPSMSV 330

Query: 427 LWNGSKLHSFALEWGLKQGDPLSSYLFVLCMELL 326
           LWNG K  SF    GL+QGDPLS YLFVLC+E L
Sbjct: 331 LWNGGKTDSFVPARGLRQGDPLSPYLFVLCLERL 364



 Score = 36.2 bits (82), Expect(2) = 5e-20
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -3

Query: 212 DASVK*ASLMTEIIKSFCGFGRQKNNIQKSKLFVSQNTKPRTTGKLHHMFGIPASANLGL 33
           +ASV    ++  +++ FC    Q  +++KSK+  S N        +    GI  +  LG 
Sbjct: 385 EASVAQILIIRRVLEQFCEASGQNVSLEKSKIVFSNNVSRDMERLISGESGIGCTRELGK 444

Query: 32  YLGMSITHGR 3
           YLGM I   R
Sbjct: 445 YLGMPILQKR 454


>gb|EMJ04271.1| hypothetical protein PRUPE_ppa023514mg [Prunus persica]
          Length = 670

 Score = 50.1 bits (118), Expect(3) = 4e-19
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
 Frame = -1

Query: 568 LFLIHSIW-----RKTGRKGSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKELWNGSKLH 404
           + L H ++     RK+ +   M +K+D+ KAYD  +W FLE ++  +G            
Sbjct: 124 IILAHEVFHYLKLRKSKKVFEMGVKLDMNKAYDCVEWDFLEAMMIRMG------------ 171

Query: 403 SFALEW------GLKQGDPLSSYLFVLCMELLGQAITKQLMKG 293
            F + W       ++ GDPLS YLF+L  E+L   + K    G
Sbjct: 172 -FTVRWVELIMSCIRTGDPLSPYLFLLVSEVLSLLVLKACESG 213



 Score = 47.8 bits (112), Expect(3) = 4e-19
 Identities = 23/86 (26%), Positives = 44/86 (51%)
 Frame = -3

Query: 311 KAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNNI 132
           KA   G    +   R  P +SH+ F DD ++F  A+ +  + M +++ ++C    Q+ ++
Sbjct: 208 KACESGFLQGIKLRRSGPTLSHLMFTDDTLIFLRATEQNYTNMVQLLNAYCRASGQQISL 267

Query: 131 QKSKLFVSQNTKPRTTGKLHHMFGIP 54
            KS +F S NT      ++ H+  +P
Sbjct: 268 AKSTIFFSPNTPSNLGHQICHILAMP 293



 Score = 44.3 bits (103), Expect(3) = 4e-19
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -2

Query: 810 QEKYKQNGVEPEIKAVLFQMGGLKAPGPDGLP-FFFKKNWHIV 685
           + K+K N  E E+K  +FQMGG+KAPGP+G    F++  W  +
Sbjct: 64  RSKFKNNRHEVEVKEAVFQMGGMKAPGPNGFQGMFYQTYWDTI 106


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 65.1 bits (157), Expect(2) = 9e-19
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
 Frame = -1

Query: 562 LIHSIWRKTGRK-GSMAIKVDLEKAYDRADWRFLEKVLKAVGFGKELW------------ 422
           + H++ RK   K G  A+K+D+ KAYDR +W FLE+V+K +GF  + W            
Sbjct: 559 IFHAMKRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGF-CDGWIDRVMACISSVS 617

Query: 421 -----NGSKLHSFALEWGLKQGDPLSSYLFVLCMELLGQAITK 308
                NG    S +   GL+QGDP+S YLF+LC +     ++K
Sbjct: 618 FTFNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSK 660



 Score = 55.8 bits (133), Expect(2) = 9e-19
 Identities = 32/104 (30%), Positives = 54/104 (51%)
 Frame = -3

Query: 314 NKAVNEGRWMPVNTSRGRPDISHIFFADDLILFGDASVK*ASLMTEIIKSFCGFGRQKNN 135
           +KA +E +       RG P +SH+FFADD ILF  ASV+  S++ +II  +     Q+ N
Sbjct: 659 SKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVN 718

Query: 134 IQKSKLFVSQNTKPRTTGKLHHMFGIPASANLGLYLGMSITHGR 3
           + K+++  S++        + ++ G+        YLG+    GR
Sbjct: 719 LSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGR 762