BLASTX nr result
ID: Catharanthus22_contig00026515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00026515
(735 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 72 2e-10
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 72 2e-10
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 71 3e-10
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 71 3e-10
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 71 3e-10
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 70 7e-10
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 70 7e-10
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 69 2e-09
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 69 2e-09
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 69 2e-09
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 69 2e-09
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 69 2e-09
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 67 8e-09
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 64 7e-08
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 63 9e-08
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g... 62 2e-07
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 62 2e-07
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 62 2e-07
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 61 3e-07
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 61 3e-07
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 72.0 bits (175), Expect = 2e-10
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W++N A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 505 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 564
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 565 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 624
Query: 372 KNL 364
N+
Sbjct: 625 GNV 627
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 72.0 bits (175), Expect = 2e-10
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W++N A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 298 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 357
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 358 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 417
Query: 372 KNL 364
N+
Sbjct: 418 GNV 420
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 71.2 bits (173), Expect = 3e-10
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 357
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 358 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTIL 417
Query: 372 KNL 364
N+
Sbjct: 418 GNV 420
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 71.2 bits (173), Expect = 3e-10
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 174
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 175 DVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTIL 234
Query: 372 KNL 364
N+
Sbjct: 235 GNV 237
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 71.2 bits (173), Expect = 3e-10
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 342
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 343 DVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTIL 402
Query: 372 KNL 364
N+
Sbjct: 403 GNV 405
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 70.1 bits (170), Expect = 7e-10
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLS 392
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 393 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 452
Query: 372 KNL 364
N+
Sbjct: 453 GNV 455
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 70.1 bits (170), Expect = 7e-10
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLS 392
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 393 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 452
Query: 372 KNL 364
N+
Sbjct: 453 GNV 455
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 68.9 bits (167), Expect = 2e-09
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ +H+C ++D F + G +++G+N ++ +G + I+ L
Sbjct: 240 DEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLS 299
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P + N+ISL L KGY+Y G KV KG +VM+ + ++YHL G ++
Sbjct: 300 DVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIV 359
Query: 372 KNL 364
N+
Sbjct: 360 GNV 362
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 68.9 bits (167), Expect = 2e-09
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLL 266
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 267 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTIL 326
Query: 372 KNL 364
N+
Sbjct: 327 GNV 329
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 68.6 bits (166), Expect = 2e-09
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I L
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLS 189
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 190 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 249
Query: 372 KNL 364
N+
Sbjct: 250 GNV 252
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I+ L
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLS 323
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++IS L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 324 DVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 383
Query: 372 KNL 364
N+
Sbjct: 384 GNV 386
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 68.6 bits (166), Expect = 2e-09
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + +G + I L
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLS 189
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L KGYKY G KV KG +VM+ + N+YHL G ++
Sbjct: 190 DVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTIL 249
Query: 372 KNL 364
N+
Sbjct: 250 GNV 252
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 66.6 bits (161), Expect = 8e-09
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFII-VGNNRR*RLKALGEFA*SSTNDKIKIL 547
+ W+++ A FHIC ++D F + G ++ +G++ + +G + + + L
Sbjct: 240 DEWILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPHEIVGIGSVQIKTHDGMTRTL 299
Query: 546 PDVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVM---RRQKNIYHLDGHSL 376
DVRY+P N+ISL L ++GYKY G+G KV KG + M N+Y L G +L
Sbjct: 300 KDVRYIPGMARNLISLSTLDAEGYKYSGLGGVVKVSKGSLVYMISDMNSANLYVLRGSTL 359
>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
Length = 894
Score = 63.5 bits (153), Expect = 7e-08
Identities = 31/116 (26%), Positives = 62/116 (53%)
Frame = -1
Query: 717 WVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILPDV 538
W+++ FH+C + F+D + N G +++GNN+ ++ G + ++L D+
Sbjct: 282 WILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLEDI 341
Query: 537 RYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMRRQKNIYHLDGHSLKK 370
RY+P+ ++N+ISL L GY + +V +G VM+ Q+ + H+ L++
Sbjct: 342 RYIPELKMNLISLGMLDKLGYTFKSEPNSLRVARGSLTVMKHQR-LGHISHRGLQE 396
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 63.2 bits (152), Expect = 9e-08
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQ-FRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKIL 547
+ W+++ A FHIC ++D F + +N + +G++ + +G + + + L
Sbjct: 290 DEWILDTACSFHICINRDWFSSYKSVQNEDVVRMGDDNPREIVGIGSVQIKTHDGMTRTL 349
Query: 546 PDVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVM---RRQKNIYHLDGHSL 376
DVR++P N+ISL L ++GYKY G G KV KG + M N+Y L G +L
Sbjct: 350 KDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTL 409
>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
Japonica Group]
Length = 759
Score = 62.4 bits (150), Expect = 2e-07
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFII-VGNNRR*RLKALGEFA*SSTNDKIKIL 547
+ W+++ A FHIC ++D F + G ++ +G++ + +G + + + L
Sbjct: 219 DEWILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPRGIMGIGSVQIKTHDGMTRTL 278
Query: 546 PDVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVM---RRQKNIYHLDGHSL 376
D R++P N+ISL L S+GYKY G G KV KG + M N+Y L G +L
Sbjct: 279 KDARHIPGMARNLISLSTLDSEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTL 338
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 62.0 bits (149), Expect = 2e-07
Identities = 33/104 (31%), Positives = 54/104 (51%)
Frame = -1
Query: 717 WVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILPDV 538
WV++ +H+C +D F Q N G +++GNN + +G A + + K + L +V
Sbjct: 178 WVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEV 237
Query: 537 RYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMRRQK 406
R+VPD + N+ISL L GY + + K +VM+ QK
Sbjct: 238 RHVPDLKRNLISLGTLDKSGYNFKAKNGKLTISKXAMVVMKGQK 281
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 62.0 bits (149), Expect = 2e-07
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
+ W+++ A +H+C ++D F + G +++G++ + + + I+ L
Sbjct: 298 DQWILDTACTYHMCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLS 357
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMR---RQKNIYHLDGHSLK 373
DVR++P+ + ++ISL L K YKY G KV KG +VM+ + N+YH+ G ++
Sbjct: 358 DVRHIPNLKRSLISLCTLDRKVYKYSGGDGILKVTKGSLVVMKADIKSANLYHVRGTTIL 417
Query: 372 KNL 364
N+
Sbjct: 418 GNI 420
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 61.2 bits (147), Expect = 3e-07
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFII-VGNNRR*RLKALGEFA*SSTNDKIKIL 547
+ W+++ FHIC ++D F + G ++ +G++ + +G + + + L
Sbjct: 185 DEWILDTTCSFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTL 244
Query: 546 PDVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVM---RRQKNIYHLDGHSL 376
DVR++P N+ISL L ++GYKY G G KV KG + M N+Y L G +L
Sbjct: 245 KDVRHIPRMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTL 304
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 61.2 bits (147), Expect = 3e-07
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = -1
Query: 723 NNWVVNYASDFHICKDQDMFDDLQFRNFGFIIVGNNRR*RLKALGEFA*SSTNDKIKILP 544
N WV++ FH+ +D F D + + G++ +GN+ +K +G +++ IL
Sbjct: 283 NEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILT 342
Query: 543 DVRYVPDSRVNIISLMELTSKGYKYVGIGMFCKVFKGGCLVMRRQK--NIYHLDG 385
DVRY+P+ N+ISL L +G + K+ KG +++ QK +Y LDG
Sbjct: 343 DVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDTLYILDG 397