BLASTX nr result
ID: Catharanthus22_contig00026394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00026394
(704 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part... 65 2e-08
ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, part... 65 3e-08
ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, part... 65 3e-08
ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Caps... 64 5e-08
ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, part... 64 5e-08
ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, part... 64 5e-08
ref|XP_006289412.1| hypothetical protein CARUB_v10002911mg [Caps... 64 6e-08
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga... 64 6e-08
gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebenne... 62 1e-07
ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, part... 62 2e-07
ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, part... 62 2e-07
ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, part... 62 2e-07
ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, part... 62 2e-07
ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, part... 61 3e-07
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7... 61 3e-07
gb|EOY22292.1| Uncharacterized protein TCM_014510 [Theobroma cacao] 60 9e-07
dbj|BAE79383.1| unnamed protein product [Ipomoea batatas] 60 9e-07
ref|XP_006282176.1| hypothetical protein CARUB_v10028438mg, part... 59 1e-06
gb|EMJ10142.1| hypothetical protein PRUPE_ppb015526mg, partial [... 59 1e-06
gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protei... 59 2e-06
>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
gi|482547819|gb|EOA12095.1| hypothetical protein
CARUB_v10016517mg, partial [Capsella rubella]
Length = 457
Score = 65.5 bits (158), Expect = 2e-08
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPF-RSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++++LW E +VDL + ++ F R ++Y L GGPW V G+HL V W F P
Sbjct: 93 RKLKELWKPTGEMSVVDLPRQFFMIRFEREEEYLAALTGGPWRVFGSHLMVQAWSSDFNP 152
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
+ D I++T V VR P+ F+ +D
Sbjct: 153 LRDDIVTTPVWVRLSNLPVFFYHQD 177
>ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, partial [Capsella rubella]
gi|482565486|gb|EOA29675.1| hypothetical protein
CARUB_v10015822mg, partial [Capsella rubella]
Length = 333
Score = 64.7 bits (156), Expect = 3e-08
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSK-DYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+R+R+LW ++DL + +V F ++ DY V+ GGPW + G+ L V W PSF P
Sbjct: 94 KRLRELWKPTGGMSVLDLPRQFFMVRFDNEADYMAVMTGGPWRLFGSVLMVQAWSPSFDP 153
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQK 456
HD+I +T V VR P+ F+ K
Sbjct: 154 QHDEIRTTPVWVRVSKLPVLFYHK 177
>ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, partial [Capsella rubella]
gi|482561732|gb|EOA25923.1| hypothetical protein
CARUB_v10019305mg, partial [Capsella rubella]
Length = 361
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSKD-YEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++R++W + +VDL + +V F +D Y L GGPW + G++L V W P F P
Sbjct: 97 KKLREMWRPKGAMYVVDLPRQFFMVRFELEDEYLEALTGGPWRIFGSYLMVKAWEPEFDP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQK 456
M D+I++T V +R P+ F+ K
Sbjct: 157 MTDEIVTTPVWIRLSNIPVNFYHK 180
>ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Capsella rubella]
gi|482565484|gb|EOA29673.1| hypothetical protein
CARUB_v10015820mg [Capsella rubella]
Length = 503
Score = 63.9 bits (154), Expect = 5e-08
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPF-RSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++R+LW ++DL ++ F R +Y L GGPW V G++L V W P F P
Sbjct: 97 RKLRELWKPNGGMYVLDLPRQCFMIRFDREDEYHAALTGGPWKVFGSYLLVQDWSPDFNP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
+ D I++T V VR P+ F+Q+D
Sbjct: 157 LRDDIVTTPVWVRLSNIPVIFYQED 181
>ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, partial [Capsella rubella]
gi|482565360|gb|EOA29549.1| hypothetical protein
CARUB_v10015577mg, partial [Capsella rubella]
Length = 476
Score = 63.9 bits (154), Expect = 5e-08
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPF-RSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++R+LW ++DL ++ F R +Y L GGPW V G++L V W P F P
Sbjct: 97 RKLRELWKPNGGMYVLDLPRQCFMIRFDREDEYHAALTGGPWKVFGSYLLVQDWSPDFNP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
+ D I++T V VR P+ F+Q+D
Sbjct: 157 LRDDIVTTPVWVRLSNIPVIFYQED 181
>ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, partial [Capsella rubella]
gi|482554312|gb|EOA18505.1| hypothetical protein
CARUB_v10007057mg, partial [Capsella rubella]
Length = 394
Score = 63.9 bits (154), Expect = 5e-08
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSKD-YEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+R+RD+WN + ++DL + +V F S++ Y L GGPW + G++L W P F P
Sbjct: 97 RRLRDMWNPSRDMFVLDLPRQFFMVRFESEEEYMAALTGGPWKIFGSYLMAQAWSPDFDP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFF 462
+ D+I +T V VR P+ F+
Sbjct: 157 IRDEITTTPVWVRLSNIPVTFY 178
>ref|XP_006289412.1| hypothetical protein CARUB_v10002911mg [Capsella rubella]
gi|482558118|gb|EOA22310.1| hypothetical protein
CARUB_v10002911mg [Capsella rubella]
Length = 474
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSKD-YEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+R++++W + +VDL + +V F S+D Y L GGPW V G++L V W P F P
Sbjct: 80 RRLKEMWKPSRDMVVVDLPRQFFMVRFESEDEYMAALTGGPWRVFGSYLMVQAWSPDFDP 139
Query: 527 MHDKIMSTLVCVRFPLTPIEFF 462
+ D+I +T V VR P+ F+
Sbjct: 140 IRDEIETTPVWVRLSNLPVSFY 161
>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 744
Score = 63.5 bits (153), Expect = 6e-08
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRS-KDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+RV +W + E++DL L F + D E L GGPW ++ ++L + +W+P FRP
Sbjct: 142 ERVNRIWKTNDKVEVIDLGHDVFLFKFNNGNDMEKALFGGPWFILNHYLMLTRWKPDFRP 201
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
+V +RFP P+E++ K+
Sbjct: 202 SQSVFDKIMVWIRFPELPLEYYDKE 226
>gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebennensis]
Length = 496
Score = 62.4 bits (150), Expect = 1e-07
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRPM 525
+++R+LW E ++DL + ++ F S++Y L GGP V G++L + W P F P+
Sbjct: 91 RKLRELWKPVGEMSVMDLPRQFFMIRFASEEYMGALTGGPQRVFGSYLLLQAWDPDFDPL 150
Query: 524 HDKIMSTLVCVRFPLTPIEFFQK 456
D+I +T V +R P+ F+ K
Sbjct: 151 RDEITTTPVWIRLSNLPVTFYHK 173
>ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, partial [Capsella rubella]
gi|482555545|gb|EOA19737.1| hypothetical protein
CARUB_v10003838mg, partial [Capsella rubella]
Length = 391
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSKD-YEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+R+++LW + +VDL + +V F S D Y L GGPW V G++L V W P F P
Sbjct: 97 RRLKELWRPSRDMVVVDLPRQFFMVRFESDDEYLAALTGGPWKVFGSYLMVQAWSPDFDP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFF 462
+ D++ T V VR P+ F+
Sbjct: 157 VRDELEMTPVWVRLSNIPVSFY 178
>ref|XP_006299881.1| hypothetical protein CARUB_v10016088mg, partial [Capsella rubella]
gi|482568590|gb|EOA32779.1| hypothetical protein
CARUB_v10016088mg, partial [Capsella rubella]
Length = 340
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPF-RSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+R+RDLW ++DL + ++ F + ++Y L GGPW V G+ L W PSF P
Sbjct: 97 RRLRDLWKPAGAMHVMDLPRQFFMIRFEKEEEYMAALTGGPWRVFGSCLLTQAWSPSFDP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQK 456
+ D+I +T V +R P+ F+ +
Sbjct: 157 LRDEITTTPVWIRLSNLPVNFYHQ 180
>ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, partial [Capsella rubella]
gi|482564485|gb|EOA28675.1| hypothetical protein
CARUB_v10024899mg, partial [Capsella rubella]
Length = 451
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFR-SKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++++LW ++DL + +V F ++Y + L GGPW V GN+L V +W P+F P
Sbjct: 97 RKLKELWKPSGRMYVMDLPRHFFMVRFELEEEYLNALTGGPWRVFGNYLMVQQWSPNFDP 156
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQK 456
+ D I++T V VR P+ ++ K
Sbjct: 157 LKDDIVTTPVWVRLMNIPVWYYHK 180
>ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, partial [Capsella rubella]
gi|482561670|gb|EOA25861.1| hypothetical protein
CARUB_v10019240mg, partial [Capsella rubella]
Length = 405
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPF-RSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++R+LW + + DL + +V F ++Y L GGPW V G++L V W P F P
Sbjct: 65 RKLRELWKPKGAMHVTDLPRQFFMVRFDMEEEYMEALTGGPWKVFGSYLMVQDWSPDFDP 124
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQK 456
M D+I +T V VR P+ F+ +
Sbjct: 125 MRDEITTTPVWVRLSNIPMLFYHR 148
>ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, partial [Capsella rubella]
gi|482564602|gb|EOA28792.1| hypothetical protein
CARUB_v10025024mg, partial [Capsella rubella]
Length = 507
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFRSKD-YEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++R+LW + ++DL + LV F +D Y V+ GGPW + G+ L W PSF P
Sbjct: 115 RKLRELWAPKGGMTVIDLPRQFFLVRFELEDDYMGVVTGGPWRLFGSLLMFQAWSPSFNP 174
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQK 456
M D+I +T V VR P+ ++ K
Sbjct: 175 MQDEIETTPVWVRISNLPVHYYHK 198
>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
gi|7268308|emb|CAB78602.1| hypothetical protein
[Arabidopsis thaliana]
Length = 655
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFR-SKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+++RDLW ++DL + +V F +DY L GGPW V+G+ L V W P F P
Sbjct: 112 RKLRDLWRPTGGMSVLDLPRQFFMVRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNP 171
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
+ D I +T V VR P+ F+ +
Sbjct: 172 LRDVIETTPVWVRVANLPVTFYHNE 196
>gb|EOY22292.1| Uncharacterized protein TCM_014510 [Theobroma cacao]
Length = 593
Score = 59.7 bits (143), Expect = 9e-07
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -1
Query: 701 RVRDLWNLEWEHEMVDLE-GVYCLVPFRSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRPM 525
RV+ +W L + + VDLE G+YC DY VL GPW++ ++LTV +W FR
Sbjct: 187 RVKQMWALLGDFQAVDLENGLYCFRFDNKSDYLQVLTDGPWIIADHYLTVRRWCLGFRSD 246
Query: 524 HDKIMSTLVCVRFPLTPIEFFQKD 453
+ S V P P+E++ ++
Sbjct: 247 EASVESVATWVCLPGMPLEYYDRE 270
>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
Length = 532
Score = 59.7 bits (143), Expect = 9e-07
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLE-GVYCLVPFRSKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
QR LW L+ +++D+ G + + KDY HVL GPW + N+L +W P+F P
Sbjct: 120 QRAPSLWQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLDGPWKIFDNYLITQRWVPNFEP 179
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
K V VR P +E+F+ D
Sbjct: 180 RTAKFQKMAVWVRLPELSMEYFRDD 204
>ref|XP_006282176.1| hypothetical protein CARUB_v10028438mg, partial [Capsella rubella]
gi|482550880|gb|EOA15074.1| hypothetical protein
CARUB_v10028438mg, partial [Capsella rubella]
Length = 454
Score = 59.3 bits (142), Expect = 1e-06
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = -1
Query: 704 QRVRDLWNLEWEHEMVDLEGVYCLVPFR-SKDYEHVLDGGPWVVMGNHLTVAKWRPSFRP 528
+R+R++W + ++DL + +V F ++Y L GGPW V G+ L V W P F P
Sbjct: 80 KRLREMWMPKGAMYVIDLPRRFFMVRFELEEEYLAALTGGPWRVFGSILMVQAWTPEFDP 139
Query: 527 MHDKIMSTLVCVRFPLTPIEFFQKD 453
+ D+I++T V +R P+ + KD
Sbjct: 140 LVDEIVTTPVWIRLTNIPVNLYHKD 164
>gb|EMJ10142.1| hypothetical protein PRUPE_ppb015526mg, partial [Prunus persica]
Length = 594
Score = 59.3 bits (142), Expect = 1e-06
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -1
Query: 701 RVRDLWNLEWEHEMVDLEGVYCLVPFR-SKDYEHVLDGGPWVVMGNHLTVAKWRPSFRPM 525
R+ W+L E +++DL Y +V F +D VL GGPW++ G +L + KWRP F P
Sbjct: 194 RLNQKWSLRGEWKLIDLVNDYYVVKFELEEDLNFVLTGGPWIIAGQYLVMQKWRPGFCPA 253
Query: 524 HDKIMSTLVCVRFPLTPIEFF 462
+I V +R +E F
Sbjct: 254 TAQITRMAVWLRVSAIQLECF 274
>gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protein [Theobroma
cacao]
Length = 370
Score = 58.9 bits (141), Expect = 2e-06
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -1
Query: 701 RVRDLWNLEWEHEMVDLE-GVYCLVPFRSKDYEHVLDGGPWVVMGNHL-TVAKWRPSFRP 528
RV+ LW+L + ++VDL+ G YC+ D++HVL GPW + G++L T+ +W F
Sbjct: 102 RVKQLWSLIGDFQVVDLDNGFYCVRFSNKSDFDHVLTEGPWFIAGHYLSTIRRWTLEFCS 161
Query: 527 MHDKIMSTLVCVRFPLTPIEFF 462
+ S +R P P+E++
Sbjct: 162 NEASVDSIAAWIRLPGMPLEYY 183