BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00026209
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241813.1| PREDICTED: pentatricopeptide repeat-containi...   171   1e-40
ref|XP_006353639.1| PREDICTED: pentatricopeptide repeat-containi...   168   1e-39
ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
gb|EMJ23233.1| hypothetical protein PRUPE_ppa003040mg [Prunus pe...   140   3e-31
gb|EXC20787.1| hypothetical protein L484_007369 [Morus notabilis]     137   2e-30
ref|XP_004292965.1| PREDICTED: pentatricopeptide repeat-containi...   130   3e-28
ref|XP_006476197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   129   6e-28
ref|XP_006450554.1| hypothetical protein CICLE_v10008018mg [Citr...   129   8e-28
ref|XP_002308636.1| hypothetical protein POPTR_0006s26360g [Popu...   127   2e-27
gb|EOY31373.1| Pentatricopeptide repeat superfamily protein isof...   127   3e-27
gb|EOY31372.1| Pentatricopeptide repeat superfamily protein isof...   127   3e-27
gb|EOY31375.1| Pentatricopeptide repeat (PPR) superfamily protei...   126   5e-27
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   123   3e-26
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_004498635.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
ref|XP_002871469.1| pentatricopeptide repeat-containing protein ...   116   4e-24
ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containi...   112   8e-23
ref|NP_196692.1| pentatricopeptide repeat-containing protein [Ar...   112   8e-23
gb|ESW33251.1| hypothetical protein PHAVU_001G055200g [Phaseolus...   110   4e-22
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   109   5e-22

>ref|XP_004241813.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Solanum lycopersicum]
          Length = 602

 Score =  171 bits (433), Expect = 1e-40
 Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 5/194 (2%)
 Frame = +1

Query: 28  RRDFLSLMTILRRATT---TVRRYSTQS-SAAIRGKPKWPLSK-SKPDXXXXXXXXXXXX 192
           RR  +SL +++   TT   T + +STQS   + RGKP   L K + P             
Sbjct: 10  RRSIISLTSLVSHLTTKNPTFKLFSTQSWLKSTRGKPLMKLPKLNYPPKQPTPLFSPPPS 69

Query: 193 XXXXXXXNFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPK 372
                  N+  ++FT L ++L +  + PGP LENAL+ A I+  E + L++FNH DSSPK
Sbjct: 70  THQPETPNYCPTDFTTLSEILRDPTIPPGPALENALDRAGIEVNECMFLQLFNHFDSSPK 129

Query: 373 PLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNLDTFAIM 552
           PLFTL+ WAEK+  F+FS+ VFNA+VN+LGK REFDSAW+LIL  + +++ PNL TFAIM
Sbjct: 130 PLFTLYLWAEKKEWFKFSLPVFNAVVNALGKEREFDSAWNLILDRLNSTERPNLGTFAIM 189

Query: 553 IRRYARAGMPLPAI 594
           IRRY+RAGM LPAI
Sbjct: 190 IRRYSRAGMLLPAI 203


>ref|XP_006353639.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Solanum tuberosum]
          Length = 604

 Score =  168 bits (425), Expect = 1e-39
 Identities = 93/194 (47%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
 Frame = +1

Query: 28  RRDFLSLMTILRRATT---TVRRYSTQS-SAAIRGKPKWPLSK-SKPDXXXXXXXXXXXX 192
           R   +SL ++L   TT   T + +STQS   + RGKP   L K + P             
Sbjct: 10  RHSIISLTSLLSHLTTKNPTSKLFSTQSWLKSTRGKPLMKLPKLNHPPKQPIPLFSPPPS 69

Query: 193 XXXXXXXNFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPK 372
                  N+  ++FT L ++L +  +  GP LENAL+ A ++  E + L++FNH DSSPK
Sbjct: 70  TQQPETPNYCPTDFTTLCEILRDPIIPAGPVLENALDRAGVEVNECMFLQLFNHFDSSPK 129

Query: 373 PLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNLDTFAIM 552
           PLFTL+ WAEK+  F+FS+ VFNA+VN+LGK REFDSAW+LIL  + +++ PNLDTFAIM
Sbjct: 130 PLFTLYLWAEKKEWFKFSLPVFNAVVNALGKEREFDSAWNLILDRLNSTERPNLDTFAIM 189

Query: 553 IRRYARAGMPLPAI 594
           IRRYARAGM LPA+
Sbjct: 190 IRRYARAGMLLPAV 203


>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score =  141 bits (356), Expect = 1e-31
 Identities = 72/130 (55%), Positives = 92/130 (70%), Gaps = 3/130 (2%)
 Frame = +1

Query: 214 NFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFR 393
           NF+ S+F+ +  LLT+  L  G  LE+ALN   I P   LL  IF+H D+SPKPLFTLFR
Sbjct: 66  NFSQSDFSTICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFR 125

Query: 394 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 564
           WA KQPGFE S+ +FN+M++ L K+R FDSAW L+L  I+  + P L   +TFA++IRRY
Sbjct: 126 WAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRY 185

Query: 565 ARAGMPLPAI 594
           ARAGM L AI
Sbjct: 186 ARAGMTLSAI 195


>gb|EMJ23233.1| hypothetical protein PRUPE_ppa003040mg [Prunus persica]
          Length = 609

 Score =  140 bits (352), Expect = 3e-31
 Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
 Frame = +1

Query: 31  RDFLSLMTILRRATT-------TVRRYSTQSSAAIRGKP--KWPLSKSKP-DXXXXXXXX 180
           R FLSL  +L +          ++R +S QS  ++RG P  KWP     P          
Sbjct: 7   RHFLSLALLLFKPNPNLNLRALSLRFFSNQSWLSVRGNPIIKWPSPPDIPCSLPHPNPAP 66

Query: 181 XXXXXXXXXXXNFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLD 360
                      NF+ ++F+ + ++L + ++ PG  L++AL+   I+P   LL  +F+H D
Sbjct: 67  NPNPNPNSSGPNFSQNDFSTIANVLADPSISPGSSLQSALDRTGIEPGPCLLQAVFDHFD 126

Query: 361 SSPKPLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL-- 534
           SSPK L TLF WAEK+PGF  S  +F  M+N L K+REF+SAWSLIL+ I   + P L  
Sbjct: 127 SSPKLLHTLFLWAEKRPGFRSSATLFGCMINVLAKSREFESAWSLILNRIGGDEEPGLVS 186

Query: 535 -DTFAIMIRRYARAGMPLPAI 594
            DTF IMIRRY+RAGM   AI
Sbjct: 187 VDTFVIMIRRYSRAGMSQSAI 207


>gb|EXC20787.1| hypothetical protein L484_007369 [Morus notabilis]
          Length = 612

 Score =  137 bits (346), Expect = 2e-30
 Identities = 84/217 (38%), Positives = 121/217 (55%), Gaps = 24/217 (11%)
 Frame = +1

Query: 16  LALHRRDFLSLMTILRRATT---------TVRRYSTQSSA-----AIRGKP--KWP---- 135
           L   RR F+SL + + +            T+R +S+ S++     ++ GKP  +WP    
Sbjct: 7   LLFKRRHFISLTSPIFQPNPNPNPNLQFHTLRFFSSSSASGLSWLSVPGKPLIRWPHEPC 66

Query: 136 -LSKSKPDXXXXXXXXXXXXXXXXXXXNFNSSEFTCLRDLLTNQNLKPGPELENALNLAR 312
            +   +PD                    F+ +EF  + ++LTN N+  G  L  AL+   
Sbjct: 67  SVPNPQPDPNPSPNPGA----------EFSQNEFAAISEVLTNPNISGGFSLHTALDRTG 116

Query: 313 IDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWS 492
           I+P+ +LL  +F+H DSSPK L++LF WAEKQPG+  S ++F +++N L K+REFDSAWS
Sbjct: 117 IEPSPSLLQAVFDHFDSSPKLLYSLFLWAEKQPGYRSSASLFASVINVLAKSREFDSAWS 176

Query: 493 LILHHIKASKSPNL---DTFAIMIRRYARAGMPLPAI 594
           LILH I   + P L   DTF IMIRRYAR GMP  A+
Sbjct: 177 LILHRIGKEEEPRLVCEDTFVIMIRRYAREGMPQSAV 213


>ref|XP_004292965.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 582

 Score =  130 bits (326), Expect = 3e-28
 Identities = 74/171 (43%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
 Frame = +1

Query: 97  QSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXXNFNSSEFTCLRDLLTNQNL 270
           QS  ++ G P  KWP     P                     F+ ++F+ +  LLT+ ++
Sbjct: 13  QSWLSVPGNPLIKWPSLSPPPSPPPTLPPPNPNPNFDP---KFSENDFSTITKLLTDPSI 69

Query: 271 KPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFNAMV 450
            PG  L +AL+   IDP+ +L+  +F+H DSSPK L TLF WAE+QPGF  SV +F +++
Sbjct: 70  FPGASLRSALDRVGIDPSPSLVQAVFDHFDSSPKLLHTLFVWAEEQPGFRCSVKLFTSVI 129

Query: 451 NSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRYARAGMPLPAI 594
           N L KAREF+SAWS+IL  I   K   L   D F IMIRRYARAG P  AI
Sbjct: 130 NVLAKAREFESAWSMILDRIGGDKEAGLVSVDAFVIMIRRYARAGQPQSAI 180


>ref|XP_006476197.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g11310, mitochondrial-like [Citrus sinensis]
          Length = 551

 Score =  129 bits (324), Expect = 6e-28
 Identities = 66/130 (50%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
 Frame = +1

Query: 214 NFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFR 393
           NF+ ++F+ +  LL N  +  GP LE+ LN   ++P  ALLL +F H D SPK L TLFR
Sbjct: 45  NFSQTDFSVISGLLRNPAISSGPSLESELNQTGVEPEPALLLAVFEHFDHSPKLLHTLFR 104

Query: 394 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 564
           WAE +P F+ S A+FN M+  L KA+EFDSAW L+L  I   + P+    DTF I+IRRY
Sbjct: 105 WAESKPEFKCSAALFNCMIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRY 164

Query: 565 ARAGMPLPAI 594
           ARAGM   AI
Sbjct: 165 ARAGMVEAAI 174


>ref|XP_006450554.1| hypothetical protein CICLE_v10008018mg [Citrus clementina]
           gi|557553780|gb|ESR63794.1| hypothetical protein
           CICLE_v10008018mg [Citrus clementina]
          Length = 517

 Score =  129 bits (323), Expect = 8e-28
 Identities = 65/130 (50%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
 Frame = +1

Query: 214 NFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFR 393
           NF+ ++F+ +  LL N  +  GP LE+ LN   ++P  ALLL +F H D SPK L TLFR
Sbjct: 45  NFSQTDFSVISGLLRNTAISSGPSLESELNQTGVEPEPALLLAVFEHFDHSPKLLHTLFR 104

Query: 394 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 564
           WAE +P F+ S A+FN ++  L KA+EFDSAW L+L  I   ++P+    DTF I+IRRY
Sbjct: 105 WAESKPEFKCSAALFNCVIKVLAKAKEFDSAWCLLLDKIGGHEAPDFVSKDTFVILIRRY 164

Query: 565 ARAGMPLPAI 594
           ARAGM   AI
Sbjct: 165 ARAGMVEAAI 174


>ref|XP_002308636.1| hypothetical protein POPTR_0006s26360g [Populus trichocarpa]
           gi|222854612|gb|EEE92159.1| hypothetical protein
           POPTR_0006s26360g [Populus trichocarpa]
          Length = 607

 Score =  127 bits (320), Expect = 2e-27
 Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 9/206 (4%)
 Frame = +1

Query: 4   ETNRLALHRRDFLSLMTILRRATTTVRRYSTQSSA----AIRGKP--KWPLSKSKPDXXX 165
           +++ +  H+   L  + +  R     R +S  SSA    A++G P  KWP + +      
Sbjct: 2   KSSLINFHKNTTLLYVFLTTRKPPHNRHFSAVSSAESWLAVQGNPLIKWPHNPNLAPSPS 61

Query: 166 XXXXXXXXXXXXXXXXNFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEI 345
                           N++ ++F  L ++L +  ++ GP L  AL+   I+P   L+  +
Sbjct: 62  ADQQNSSPTSNSNP--NYHQNDFFTLCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSV 119

Query: 346 FNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKS 525
           F+H DSSPK L ++F WAEK+PGF+ S A+FN+MVN LGKAREF SAW L+L  I  ++ 
Sbjct: 120 FDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEG 179

Query: 526 PNL---DTFAIMIRRYARAGMPLPAI 594
            +L   DTFAI+IRRY RAGM   AI
Sbjct: 180 GDLVSSDTFAILIRRYTRAGMSEAAI 205


>gb|EOY31373.1| Pentatricopeptide repeat superfamily protein isoform 2, partial
           [Theobroma cacao]
          Length = 584

 Score =  127 bits (318), Expect = 3e-27
 Identities = 76/175 (43%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
 Frame = +1

Query: 88  YSTQSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXXNFNSSEFTCLRDLLTN 261
           +S QS  + +  P  KWP   S P                     F+ S F+ + +LL N
Sbjct: 14  FSDQSWLSKKRNPLIKWPPPSSSP----------CNQPHPIPNRTFSQSNFSIISNLLKN 63

Query: 262 QNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFN 441
             +  G  LE+AL+   IDP   LL  IF   DSSPK L  LF WAEK+PGF+ S  +F+
Sbjct: 64  STITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEKKPGFKSSATLFD 123

Query: 442 AMVNSLGKAREFDSAWSLILHHI----KASKSPNLDTFAIMIRRYARAGMPLPAI 594
           +MVN LGKAR F+ AWSL+L  I    + S   +++TF I+IRRYARAGMP PAI
Sbjct: 124 SMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRYARAGMPQPAI 178


>gb|EOY31372.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508784118|gb|EOY31374.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
           gi|508784120|gb|EOY31376.1| Pentatricopeptide repeat
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 595

 Score =  127 bits (318), Expect = 3e-27
 Identities = 76/175 (43%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
 Frame = +1

Query: 88  YSTQSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXXNFNSSEFTCLRDLLTN 261
           +S QS  + +  P  KWP   S P                     F+ S F+ + +LL N
Sbjct: 25  FSDQSWLSKKRNPLIKWPPPSSSP----------CNQPHPIPNRTFSQSNFSIISNLLKN 74

Query: 262 QNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVAVFN 441
             +  G  LE+AL+   IDP   LL  IF   DSSPK L  LF WAEK+PGF+ S  +F+
Sbjct: 75  STITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEKKPGFKSSATLFD 134

Query: 442 AMVNSLGKAREFDSAWSLILHHI----KASKSPNLDTFAIMIRRYARAGMPLPAI 594
           +MVN LGKAR F+ AWSL+L  I    + S   +++TF I+IRRYARAGMP PAI
Sbjct: 135 SMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRYARAGMPQPAI 189


>gb|EOY31375.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 4, partial [Theobroma cacao]
           gi|508784121|gb|EOY31377.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 4, partial
           [Theobroma cacao]
          Length = 560

 Score =  126 bits (316), Expect = 5e-27
 Identities = 67/130 (51%), Positives = 86/130 (66%), Gaps = 4/130 (3%)
 Frame = +1

Query: 217 FNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRW 396
           F+ S F+ + +LL N  +  G  LE+AL+   IDP   LL  IF   DSSPK L  LF W
Sbjct: 25  FSQSNFSIISNLLKNSTITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLW 84

Query: 397 AEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHI----KASKSPNLDTFAIMIRRY 564
           AEK+PGF+ S  +F++MVN LGKAR F+ AWSL+L  I    + S   +++TF I+IRRY
Sbjct: 85  AEKKPGFKSSATLFDSMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRY 144

Query: 565 ARAGMPLPAI 594
           ARAGMP PAI
Sbjct: 145 ARAGMPQPAI 154


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  123 bits (309), Expect = 3e-26
 Identities = 66/127 (51%), Positives = 88/127 (69%)
 Frame = +1

Query: 214 NFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFR 393
           N++ S+F+ L +LL++ NLKP   LE AL+   I P  +LL  +F+H +SSPK L +LF 
Sbjct: 55  NYSHSDFSTLCNLLSDPNLKP---LETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFV 111

Query: 394 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNLDTFAIMIRRYARA 573
           WA+KQP FE S  +FN+++N+LGK +EFDSAW L+L       S   DTFAI+IRRY RA
Sbjct: 112 WADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVLDRTGLVSS---DTFAILIRRYTRA 168

Query: 574 GMPLPAI 594
           GMP  AI
Sbjct: 169 GMPQSAI 175


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  117 bits (294), Expect = 2e-24
 Identities = 68/177 (38%), Positives = 100/177 (56%), Gaps = 9/177 (5%)
 Frame = +1

Query: 91  STQSSAAIRGKP--KWPLSKSKPDXXXXXXXXXXXXXXXXXXXNFNSS----EFTCLRDL 252
           S  S  +  GKP  KWP    +P                     F +S    + + +  +
Sbjct: 36  SPHSWLSTPGKPLVKWPSLPDQPANPLPSNSAVISNPNSAIDVKFEASYSPNDLSTISSI 95

Query: 253 LTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWAEKQPGFEFSVA 432
           L++++++PG  LE+AL+   I P+ +LL  +F+H DSSPK L +LF WA K+ GF  S A
Sbjct: 96  LSDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAA 155

Query: 433 VFNAMVNSLGKAREFDSAWSLILHHIKASKSP---NLDTFAIMIRRYARAGMPLPAI 594
           +FN ++N L K+REFDSAWSLI   ++  +     +++ F I+IRRYARAGM  PAI
Sbjct: 156 LFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAI 212


>ref|XP_004498635.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cicer arietinum]
          Length = 596

 Score =  116 bits (291), Expect = 4e-24
 Identities = 62/129 (48%), Positives = 82/129 (63%), Gaps = 6/129 (4%)
 Frame = +1

Query: 226 SEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWAEK 405
           S F+ +  L TN ++ PG +L   LN   I P   LL  +F+H  SSPK L +LF WA+K
Sbjct: 69  SNFSLISTLFTNPSISPGSQLHAQLNRTGIKPDSPLLRAVFDHFASSPKLLHSLFLWADK 128

Query: 406 QPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHI------KASKSPNLDTFAIMIRRYA 567
           QPGF+    +F++MVN+L K +EFDSAW+L+L  I      K  K  ++ TFAI+IRRYA
Sbjct: 129 QPGFKPDPTLFDSMVNALAKIKEFDSAWTLVLDRIHREEEEKEDKLVSIGTFAILIRRYA 188

Query: 568 RAGMPLPAI 594
           RAGM   AI
Sbjct: 189 RAGMHEAAI 197


>ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317306|gb|EFH47728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 602

 Score =  116 bits (291), Expect = 4e-24
 Identities = 57/130 (43%), Positives = 90/130 (69%), Gaps = 3/130 (2%)
 Frame = +1

Query: 214 NFNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFR 393
           +F+ ++ + + +LL N N+ PG  LE+AL+   I+P+  L+  +F+ L SSP  L ++F+
Sbjct: 64  DFSKTDLSTISNLLENTNVVPGSSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFK 123

Query: 394 WAEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRY 564
           WAE +PGF  S ++F++++NSL KAREF+ AWSL+   +++ +  NL   DTF ++IRRY
Sbjct: 124 WAEMKPGFTLSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRY 183

Query: 565 ARAGMPLPAI 594
           ARAGM   AI
Sbjct: 184 ARAGMVQQAI 193


>ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 622

 Score =  112 bits (280), Expect = 8e-23
 Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 8/133 (6%)
 Frame = +1

Query: 220 NSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWA 399
           N +  + + +L  + +L PGP L   L+ A I+P  ALLL +F+   SSPK L +LF WA
Sbjct: 89  NPNALSVISNLFADPSLSPGPALHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWA 148

Query: 400 EKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHI--------KASKSPNLDTFAIMI 555
           + +P F     +F+A+VN+L KAREFD+AW L+LHH         +  +  ++ TFAIMI
Sbjct: 149 QTRPAFRPGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGTFAIMI 208

Query: 556 RRYARAGMPLPAI 594
           RRYARAGM   AI
Sbjct: 209 RRYARAGMSKLAI 221


>ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g11310, mitochondrial; Flags: Precursor
           gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis
           thaliana] gi|110738090|dbj|BAF00978.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004275|gb|AED91658.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  112 bits (280), Expect = 8e-23
 Identities = 56/128 (43%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
 Frame = +1

Query: 220 NSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWA 399
           + ++ + + +LL N ++ PG  LE+AL+   I+P+  L+  +F+ L SSP  L ++F+WA
Sbjct: 66  SKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWA 125

Query: 400 EKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSPNL---DTFAIMIRRYAR 570
           E +PGF  S ++F+++VNSL KAREF+ AWSL+   +++ +  NL   DTF ++IRRYAR
Sbjct: 126 EMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYAR 185

Query: 571 AGMPLPAI 594
           AGM   AI
Sbjct: 186 AGMVQQAI 193


>gb|ESW33251.1| hypothetical protein PHAVU_001G055200g [Phaseolus vulgaris]
          Length = 606

 Score =  110 bits (274), Expect = 4e-22
 Identities = 58/131 (44%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
 Frame = +1

Query: 220 NSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRWA 399
           N + F+ + +L T+ ++ PGP L   L+ + I+P  ALLL +F+   SSPK L +LF WA
Sbjct: 78  NLNAFSLISNLFTDPSVSPGPVLHAKLDRSAIEPDPALLLALFDRFGSSPKLLHSLFLWA 137

Query: 400 EKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKASKSP------NLDTFAIMIRR 561
           + +PGF     +F+A+VN+L KA+EFD+AW L+L ++            ++ TFAIMIRR
Sbjct: 138 QTRPGFRPGPKLFDAVVNALAKAKEFDAAWKLVLDNVDGDGEEENESLVSVGTFAIMIRR 197

Query: 562 YARAGMPLPAI 594
           YARAGM   AI
Sbjct: 198 YARAGMSKLAI 208


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477735|gb|AES58938.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  109 bits (273), Expect = 5e-22
 Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
 Frame = +1

Query: 217 FNSSEFTCLRDLLTNQNLKPGPELENALNLARIDPTEALLLEIFNHLDSSPKPLFTLFRW 396
           F+ ++FT +  L TN ++ PG  L   L    I PT  LL  +F+H  SSPK L +L+ W
Sbjct: 68  FSPNDFTLISTLFTNPSISPGSSLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLW 127

Query: 397 AEKQPGFEFSVAVFNAMVNSLGKAREFDSAWSLILHHIKA-----SKSPNLDTFAIMIRR 561
           A  QPGF+   ++F++++N+L K +EFD AWSL+L  I+       K  ++ TFAI+IRR
Sbjct: 128 ALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRR 187

Query: 562 YARAGMPLPAI 594
           YARAGM   AI
Sbjct: 188 YARAGMHKAAI 198