BLASTX nr result

ID: Catharanthus22_contig00026148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00026148
         (343 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    58   1e-08
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 62   6e-08
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    58   1e-06
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    56   4e-06

>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 58.2 bits (139), Expect(2) = 1e-08
 Identities = 25/57 (43%), Positives = 40/57 (70%)
 Frame = -1

Query: 184 ITNEREEEKVFQFLMGLNSEIYGTVRTHLIQREPMPRVRAVLAQICKEEQHRNLART 14
           +  +REEE+V QFLMGL+ E YGTV ++++  EP+P +  V A + ++E+ R + RT
Sbjct: 144 LEKKREEERVHQFLMGLDEEGYGTVSSNILSTEPLPNLNRVYAMVVQQERMRTMTRT 200



 Score = 26.2 bits (56), Expect(2) = 1e-08
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 242 KKKLGWDELDNYSQLP 195
           K K+ WDEL+NY ++P
Sbjct: 114 KLKMIWDELNNYDKMP 129


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 26/56 (46%), Positives = 42/56 (75%)
 Frame = -1

Query: 184 ITNEREEEKVFQFLMGLNSEIYGTVRTHLIQREPMPRVRAVLAQICKEEQHRNLAR 17
           +T ERE+EKV QF MGL+ +++GT  ++++  +P+P +  V A I +EE+H+NLAR
Sbjct: 130 LTQEREKEKVHQFSMGLDDKVFGTTHSNILSTKPLPTLNRVYAMIIQEERHQNLAR 185


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = -1

Query: 184 ITNEREEEKVFQFLMGLNSEIYGTVRTHLIQREPMPRVRAVLAQICKEEQHRNLAR 17
           I   RE+EK  QFLMGL+   +GTVR+ ++  +P+P +  + A + +EE+HR++AR
Sbjct: 65  IVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAMVTQEERHRSMAR 120


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
 Frame = -1

Query: 289 IIILNGQKQRVWPCVQRRNWDGTN*TTTLNSHPPYITN---EREEEKVFQFLMGLNSEIY 119
           II+  G+ + +W   +  N+D     T         T    +REEE+V QFLMGL+ + Y
Sbjct: 96  IIVYYGKLKSLWD--ELNNYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGY 153

Query: 118 GTVRTHLIQREPMPRVRAVLAQICKEEQHRNLART 14
           GTVR++++  EP+  +  V A I ++E+ R + RT
Sbjct: 154 GTVRSNILSIEPLSNLNRVYAMIVQQERVRTMTRT 188


Top