BLASTX nr result
ID: Catharanthus22_contig00026088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00026088
(324 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_002306667.1| pentatricopeptide repeat-containing family p... 99 8e-19
ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus pe... 93 4e-17
ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein... 86 4e-15
ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
emb|CBI19926.3| unnamed protein product [Vitis vinifera] 82 7e-14
ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Caps... 79 5e-13
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 79 8e-13
ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata] ... 78 1e-12
gb|ESW09500.1| hypothetical protein PHAVU_009G132700g [Phaseolus... 77 3e-12
sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-c... 75 9e-12
ref|NP_175064.2| pentatricopeptide repeat-containing protein [Ar... 74 2e-11
ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutr... 72 1e-10
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 103 bits (257), Expect = 2e-20
Identities = 50/105 (47%), Positives = 74/105 (70%)
Frame = -1
Query: 315 MHPLLTRVHIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 136
M P L + H L S ++YSNLI+ K ++AK +HAQLIK+GFNT+TFLGNRC
Sbjct: 22 MQPFLKKAH--GPLATSLSYYSNLIEHCFLL-KSLDYAKFVHAQLIKVGFNTHTFLGNRC 78
Query: 135 IDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENAR 1
+D+YS++ +D+L VF++I ++N+ SW+I LK V+ G++E AR
Sbjct: 79 LDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERAR 123
>ref|XP_002306667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856116|gb|EEE93663.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 630
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/104 (49%), Positives = 70/104 (67%)
Frame = -1
Query: 315 MHPLLTRVHIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 136
M+PL+ + H R S ++YS LID S K +FA+ HAQLIK+G N +TFLGNRC
Sbjct: 1 MYPLIKQCH--RVSRTSLSYYSYLIDHCFSL-KSLSFARITHAQLIKVGLNRHTFLGNRC 57
Query: 135 IDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
+D+YS+ +DAL VFD+I +NI SW+ICLK L+K ++ A
Sbjct: 58 LDLYSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLA 101
>ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Citrus sinensis]
Length = 640
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/104 (45%), Positives = 70/104 (67%)
Frame = -1
Query: 315 MHPLLTRVHIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 136
M L + H+++ S ++ S LID+ LSF K +FAK+IH L KLGFN +T+LGNRC
Sbjct: 1 MSSYLKKAHVNK---ASLSYCSQLIDRCLSF-KSFDFAKTIHGHLFKLGFNAHTYLGNRC 56
Query: 135 IDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
+D+YS+ D L +FDEI ++N SW+ICL+ L+K +++ A
Sbjct: 57 LDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTA 100
>gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus persica]
Length = 629
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -1
Query: 219 KPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKV-NLFHDALNVFDEIGERNIFSWDIC 43
K NFAK IHAQLIK+GFN++TFLGNRC+D+Y + N +DAL VFDEI ++NI SW+IC
Sbjct: 26 KSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIVSWNIC 85
Query: 42 LKTLVKVGDIENA 4
LK + G+++ A
Sbjct: 86 LKGFCRFGELQRA 98
>ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Solanum tuberosum]
Length = 644
Score = 90.9 bits (224), Expect = 2e-16
Identities = 53/109 (48%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = -1
Query: 318 CMHPLLTRV---HIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFL 148
CM+P + RV H H S +FYS LI LSF + +H +LIKLGFN NTFL
Sbjct: 16 CMYPFVQRVYKYHTH-----SLSFYSRLIPHCLSFSS----LQILHGKLIKLGFNKNTFL 66
Query: 147 GNRCIDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENAR 1
GN +D+YSK DA VFDEI +N SW+I LK LV+ GD+ AR
Sbjct: 67 GNCYLDLYSKFGTKIDAFKVFDEIPYKNAVSWNIWLKVLVQSGDVHCAR 115
>ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cicer arietinum]
Length = 643
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = -1
Query: 267 SFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 88
S ++ S L+ LS + P F K++HA+ +KLG NT T+LGNR ID+Y++ +DAL V
Sbjct: 14 SLSYCSFLLHHCLSHKSPY-FLKTVHARFLKLGLNTYTYLGNRIIDLYTEFGHINDALKV 72
Query: 87 FDEIGERNIFSWDICLKTLVKVGDIENA 4
FD+I +N SW+ICLK LVK G ++NA
Sbjct: 73 FDDISYKNSTSWNICLKGLVKSGQLDNA 100
>ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = -1
Query: 255 YSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEI 76
YS+LI + L N AK+IH QL+KLG ++NTFL NRC+ +Y+ HD L VFD I
Sbjct: 19 YSSLIRRCLVLGSVHN-AKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVFDGI 77
Query: 75 GERNIFSWDICLKTLVKVGDIENAR 1
++NI SW+ICLK + + GD++ AR
Sbjct: 78 KDKNIISWNICLKGMFRFGDVDGAR 102
>ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = -1
Query: 255 YSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEI 76
YS+LI + L N AK+IH QL+KLG ++NTFL NRC+ +Y+ HD L VFD I
Sbjct: 19 YSSLIRRCLVLGSVHN-AKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVFDGI 77
Query: 75 GERNIFSWDICLKTLVKVGDIENAR 1
++NI SW+ICLK + + GD++ AR
Sbjct: 78 KDKNIISWNICLKGMFRFGDVDGAR 102
>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/104 (43%), Positives = 62/104 (59%)
Frame = -1
Query: 315 MHPLLTRVHIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 136
M+PLL + + P S Y +L+ +K NF K +HA +KLG NT T+LGNRC
Sbjct: 1 MYPLLKQA----QGPYSSLSYCSLLLNHCLSKKSLNFVKIVHAHFLKLGLNTYTYLGNRC 56
Query: 135 IDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
+D+YS+ +DA VFD+I +N SW+ICLK L+K G A
Sbjct: 57 LDLYSEFGHLNDAPKVFDDISHKNSTSWNICLKWLLKSGQFGKA 100
>gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 645
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = -1
Query: 267 SFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 88
S + Y+NLI+ LS K FA++IHAQLIK GF TFLGN +++Y KV F+DA V
Sbjct: 15 SLSHYTNLINHCLSL-KSIQFAQTIHAQLIKFGFGRITFLGNCFVNLYFKVGSFNDASKV 73
Query: 87 FDEIGERNIFSWDICLKTLVKVGDIENA 4
FDEI ++NI SW+I L L+K G + A
Sbjct: 74 FDEINDKNIISWNIFLNGLLKFGHFKKA 101
>ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = -1
Query: 315 MHPLLTRVH-IHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNR 139
M+PLL + + L C S L++ LS +K N K +HA +KLG NT T+LGNR
Sbjct: 1 MYPLLKQAQGPYPSLSCC----SLLLNHCLS-QKSLNCVKIVHAHFLKLGLNTYTYLGNR 55
Query: 138 CIDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVG 19
C+D+YS+ +DAL VFD+I +N SW+ICLK L+K G
Sbjct: 56 CLDLYSEFGHINDALKVFDDISHKNSTSWNICLKGLLKSG 95
>emb|CBI19926.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/104 (41%), Positives = 65/104 (62%)
Frame = -1
Query: 315 MHPLLTRVHIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 136
M P L + H L S ++YSNLI+ K ++AK +HAQLIK+GFNT+TFLGNRC
Sbjct: 1 MQPFLKKAH--GPLATSLSYYSNLIEHCFLL-KSLDYAKFVHAQLIKVGFNTHTFLGNRC 57
Query: 135 IDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
+D++ ++ D VFDE+ +R++ SW+ + V G ++A
Sbjct: 58 LDLFGELERARD---VFDEMPKRDVVSWNTMISGYVSFGLFDDA 98
>ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Capsella rubella]
gi|482572418|gb|EOA36605.1| hypothetical protein
CARUB_v10011813mg [Capsella rubella]
Length = 621
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/83 (42%), Positives = 57/83 (68%)
Frame = -1
Query: 267 SFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 88
S +++S L+D+ L + P ++ +HAQ++K+GF NT+ GNRC+ +Y K DAL +
Sbjct: 3 SSSYFSRLVDRSLLSKSPT-LSRIVHAQIVKVGFIPNTYWGNRCLQLYFKSGSVVDALQL 61
Query: 87 FDEIGERNIFSWDICLKTLVKVG 19
FD+I ++N SW++CLK L+K G
Sbjct: 62 FDDIPDKNTISWNVCLKGLLKNG 84
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 78.6 bits (192), Expect = 8e-13
Identities = 33/61 (54%), Positives = 50/61 (81%)
Frame = -1
Query: 183 LIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
LIK+GFNT+TFLGNRC+D+YS++ +D+L VF++I ++N+ SW+I LK V+ G++E A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 3 R 1
R
Sbjct: 796 R 796
>ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata]
gi|297339814|gb|EFH70231.1| F9C16.15 [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/91 (41%), Positives = 57/91 (62%)
Frame = -1
Query: 276 LPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDA 97
+P SF ++S L+D+ L + P + +HAQL+K GF T+ GNRC+ +Y K DA
Sbjct: 1 MPSSF-YFSRLVDRYLLSKCPT-LTRIVHAQLLKAGFIRTTYWGNRCLQLYFKSGAVIDA 58
Query: 96 LNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
+FD+I ++N SW++CLK L K G + NA
Sbjct: 59 FRLFDDIPDKNTISWNVCLKGLFKNGFLNNA 89
>gb|ESW09500.1| hypothetical protein PHAVU_009G132700g [Phaseolus vulgaris]
Length = 286
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = -1
Query: 261 TFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFD 82
++ S L++ LS R NF K +HA KLG NT T+LGNRC+++YS++ +D L VFD
Sbjct: 16 SYCSLLLNHCLSQRS-LNFVKVVHAHFFKLGLNTYTYLGNRCLNLYSELGHINDTLKVFD 74
Query: 81 EIGERNIFSWDICLKTLVKVGDI 13
+I +N SW+I LK +K G +
Sbjct: 75 DISHKNSTSWNIFLKGFLKSGQL 97
>sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g43980, mitochondrial; Flags: Precursor
gi|8778677|gb|AAF79685.1|AC022314_26 F9C16.15
[Arabidopsis thaliana]
Length = 633
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/104 (39%), Positives = 63/104 (60%)
Frame = -1
Query: 315 MHPLLTRVHIHRELPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 136
M LL R H +P S ++S L+++ L + P AK +HAQL++ GF T+ GNRC
Sbjct: 1 MFQLLRRAH-GLCMPSSL-YFSRLVNRSLLSKSPT-LAKIVHAQLLEAGFVRTTYWGNRC 57
Query: 135 IDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENA 4
+ +Y K +AL +FD+I ++N +W++CLK L K G + NA
Sbjct: 58 LQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNA 101
>ref|NP_175064.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193889|gb|AEE32010.1| pentatricopeptide
repeat-containing protein-like protein [Arabidopsis
thaliana]
Length = 621
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/88 (39%), Positives = 56/88 (63%)
Frame = -1
Query: 267 SFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 88
S ++S L+++ L + P AK +HAQL++ GF T+ GNRC+ +Y K +AL +
Sbjct: 3 SSLYFSRLVNRSLLSKSPT-LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 87 FDEIGERNIFSWDICLKTLVKVGDIENA 4
FD+I ++N +W++CLK L K G + NA
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNA 89
>ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutrema salsugineum]
gi|557090330|gb|ESQ31038.1| hypothetical protein
EUTSA_v10011320mg [Eutrema salsugineum]
Length = 624
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/86 (39%), Positives = 55/86 (63%)
Frame = -1
Query: 261 TFYSNLIDQILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFD 82
+ Y + +D+ L + P A+ +HAQL+K+G NT+ GNRC+ +Y K DA +FD
Sbjct: 4 SLYFSRVDRSLLSKCPT-LARIVHAQLVKVGLIPNTYWGNRCLQLYFKSGAVIDAFRLFD 62
Query: 81 EIGERNIFSWDICLKTLVKVGDIENA 4
+I ++N +W+ICLK L++ G I +A
Sbjct: 63 DILDKNTITWNICLKGLLRNGYINHA 88
>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Frame = -1
Query: 324 IHCMHP---LLTRVHIHRE---LPCSFTFYSNLIDQILSFRKPANFAKSIHAQLIKLGFN 163
++C +P L VH+ E LP S+TF S + + +F + +H + K GF
Sbjct: 113 VYCGYPFRALQCYVHMLEESNVLPTSYTFSS--LVKACTFMCAVELGQMVHCHIWKKGFE 170
Query: 162 TNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWDICLKTLVKVGDIENAR 1
++ F+ +D YSK+ + +A VFDE+ ER+ F+W L L +VGD+++AR
Sbjct: 171 SHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSAR 224