BLASTX nr result
ID: Catharanthus22_contig00025981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00025981
(260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 137 2e-30
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 135 7e-30
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 135 7e-30
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 134 1e-29
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 134 2e-29
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 131 1e-28
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 131 1e-28
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 130 2e-28
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 129 3e-28
emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera] 128 9e-28
ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula] ... 127 2e-27
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 127 2e-27
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 126 3e-27
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 125 6e-27
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 125 6e-27
ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial pro... 124 2e-26
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 122 5e-26
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 122 7e-26
emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera] 121 9e-26
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera] 121 9e-26
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 137 bits (345), Expect = 2e-30
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFMH PR HW+AA+RVVRYLKG+PG+GI L ++S LSL +CDSDWA CP+TRR
Sbjct: 898 VHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRR 957
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SL+G+ + LG SPISWKTKKQHTVSR
Sbjct: 958 SLSGWLVFLGQSPISWKTKKQHTVSR 983
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 135 bits (339), Expect = 7e-30
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VHTLAQFM PR HW+AAIRVVRYLK +PG+GI LSS S L + +CDSD+A CP+TRR
Sbjct: 908 VHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRR 967
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SLTGYF+ LG +PISWKTKKQ TVSR
Sbjct: 968 SLTGYFVQLGDTPISWKTKKQPTVSR 993
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 135 bits (339), Expect = 7e-30
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VHTLAQFM PR HW+AAIRVVRYLK +PG+GI LSS S L + +CDSD+A CP+TRR
Sbjct: 1267 VHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRR 1326
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SLTGYF+ LG +PISWKTKKQ TVSR
Sbjct: 1327 SLTGYFVQLGDTPISWKTKKQPTVSR 1352
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 134 bits (338), Expect = 1e-29
Identities = 61/86 (70%), Positives = 71/86 (82%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VHTLAQFM PR HW+AAIRVVRYLK +PG+GI LSS S L + +CDSD+A CP+TRR
Sbjct: 908 VHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRR 967
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SLTGYF+ LG +PISWKTKKQ T+SR
Sbjct: 968 SLTGYFVQLGDTPISWKTKKQPTISR 993
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 134 bits (336), Expect = 2e-29
Identities = 60/86 (69%), Positives = 72/86 (83%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM PR HW+AA+RVVRYLKG+PG+GI L ++S LSL +CDSDWA CP+TRR
Sbjct: 977 VHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRR 1036
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SL+G+ + LG SPISWKTKKQHTVSR
Sbjct: 1037 SLSGWLVFLGQSPISWKTKKQHTVSR 1062
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 131 bits (329), Expect = 1e-28
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM PR HW+AA+RVV YLKG+PG+GI L ++S LSL +CDSDWA CP+T+R
Sbjct: 1260 VHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTKR 1319
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SL+G+ + LG SPISWKTKKQHTVSR
Sbjct: 1320 SLSGWLVFLGQSPISWKTKKQHTVSR 1345
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 131 bits (329), Expect = 1e-28
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH LAQFM PR AH+DAA+RVVRYLKGSPG+GI L+++ L+L YCDSDW +CP+TRR
Sbjct: 1300 VHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDWQSCPLTRR 1359
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
S++ Y + LGGSPISWKTKKQ TVS
Sbjct: 1360 SISAYVVLLGGSPISWKTKKQDTVS 1384
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 130 bits (327), Expect = 2e-28
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM APR AH +AA+R+VRYLKGSPG+GI LSSN L+L YCDSD+ +CP+TRR
Sbjct: 1290 VHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCPLTRR 1349
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
SL+ Y + LGGSPISWKTKKQ TVS
Sbjct: 1350 SLSAYVVLLGGSPISWKTKKQDTVS 1374
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 129 bits (325), Expect = 3e-28
Identities = 57/86 (66%), Positives = 73/86 (84%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
+H L+QFMH P+ AHW+AA+RVVRYLK SPG+GI L +N+PL L+A+CDSD+ CP + R
Sbjct: 1285 IHILSQFMHNPKPAHWEAALRVVRYLKSSPGQGILLRANTPLVLSAWCDSDFGACPHSDR 1344
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SLTG+FI LGGSP+SWKT+KQ+ VSR
Sbjct: 1345 SLTGWFIQLGGSPLSWKTQKQNVVSR 1370
>emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera]
Length = 514
Score = 128 bits (321), Expect = 9e-28
Identities = 58/85 (68%), Positives = 66/85 (77%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH LAQFM P+ HW+A +RVVRYLKG+PG+ I L S+ L L AYCDSDWA+CP+TRR
Sbjct: 331 VHMLAQFMQQPKDEHWEATLRVVRYLKGNPGQSILLRSDCDLKLYAYCDSDWASCPLTRR 390
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
SLTGYFI LG ISWKTKKQH S
Sbjct: 391 SLTGYFILLGNXSISWKTKKQHXTS 415
>ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula]
gi|355491466|gb|AES72669.1| Stomatin-like protein
[Medicago truncatula]
Length = 605
Score = 127 bits (319), Expect = 2e-27
Identities = 60/86 (69%), Positives = 68/86 (79%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM PR HW AA+RVVRYLKG+PG+GIFL S S + L +CD+DWA CPITRR
Sbjct: 405 VHILSQFMQQPREDHWTAALRVVRYLKGNPGQGIFLDSTSDMKLHGWCDADWAACPITRR 464
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SLTG+ I LG SPISWKTKKQ VSR
Sbjct: 465 SLTGWVI-LGNSPISWKTKKQQVVSR 489
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 127 bits (319), Expect = 2e-27
Identities = 57/86 (66%), Positives = 69/86 (80%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM PR HW+ A+RVV YLKG+PG+GI L ++S LSL +CDSDWA CP+TRR
Sbjct: 928 VHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRR 987
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SL+G+ + LG S ISWKTKKQHTVSR
Sbjct: 988 SLSGWLVFLGQSHISWKTKKQHTVSR 1013
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 126 bits (316), Expect = 3e-27
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM PR HW+AA+RV RYLKG+ G+GI L +S LSL +CDSDWA CP+T R
Sbjct: 1104 VHXLSQFMQEPRIEHWEAALRVXRYLKGTXGQGILLRXDSDLSLQGWCDSDWAACPVTXR 1163
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SL+G+ + LG SPISWKTKKQHTVSR
Sbjct: 1164 SLSGWLVFLGQSPISWKTKKQHTVSR 1189
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 125 bits (314), Expect = 6e-27
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM AP AHW+AA+R+VRYLKGSP +GIFL S+S L + AYCDSD+ CP+TRR
Sbjct: 1295 VHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRR 1354
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
SL+ Y + LG SPISWKTKKQ TVS
Sbjct: 1355 SLSAYVVYLGDSPISWKTKKQDTVS 1379
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 125 bits (314), Expect = 6e-27
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L+QFM AP AHW+AA+R+VRYLKGSP +GIFL S+S L + AYCDSD+ CP+TRR
Sbjct: 575 VHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRR 634
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
SL+ Y + LG SPISWKTKKQ TVS
Sbjct: 635 SLSAYVVYLGDSPISWKTKKQDTVS 659
>ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 331
Score = 124 bits (310), Expect = 2e-26
Identities = 55/85 (64%), Positives = 68/85 (80%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L++FMH PR +H +AA+RV+RYLKG+PG+G+F SS S L L AYCDSDW CP+TRR
Sbjct: 130 VHVLSRFMHQPRKSHMEAALRVIRYLKGAPGQGLFFSSTSDLKLRAYCDSDWGDCPLTRR 189
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
S TGY + LG S ISWK+K+Q TVS
Sbjct: 190 STTGYCVFLGPSLISWKSKRQKTVS 214
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 122 bits (306), Expect = 5e-26
Identities = 57/86 (66%), Positives = 69/86 (80%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
+H L+QFM P+ H +AA+RVVRYLK SPG+GI L SN+PL LT +CDS + +CPIT+R
Sbjct: 1247 IHMLSQFMSDPKADHMEAALRVVRYLKSSPGQGILLRSNTPLVLTGWCDSGFDSCPITQR 1306
Query: 182 SLTGYFISLGGSPISWKTKKQHTVSR 259
SLTG+FI LGGSPISWKTKK VSR
Sbjct: 1307 SLTGWFIQLGGSPISWKTKKHDVVSR 1332
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 122 bits (305), Expect = 7e-26
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L++FMH PR H +AA+RVVRYLK +PG+G+F SSNS L AYCDSDWA CPITRR
Sbjct: 1318 VHVLSRFMHQPRKLHMEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYCDSDWAGCPITRR 1377
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
S TGY + LG S +SW++K+Q TVS
Sbjct: 1378 STTGYCVFLGPSLVSWRSKRQKTVS 1402
>emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera]
Length = 1158
Score = 121 bits (304), Expect = 9e-26
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L++FMH PR AH +AA RVVRYLK +PG+G+F SSN+ L AYCDSDWA CP+TRR
Sbjct: 957 VHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRAYCDSDWAGCPLTRR 1016
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
S TGY + LG S ISW++K+Q TVS
Sbjct: 1017 STTGYCVFLGPSLISWRSKRQKTVS 1041
>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
Length = 1323
Score = 121 bits (304), Expect = 9e-26
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +2
Query: 2 VHTLAQFMHAPRHAHWDAAIRVVRYLKGSPGRGIFLSSNSPLSLTAYCDSDWATCPITRR 181
VH L++FMH PR AH +AA RVVRYLK +PG+G+F SSN+ L AYCDSDWA CP+TRR
Sbjct: 1122 VHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRAYCDSDWAGCPLTRR 1181
Query: 182 SLTGYFISLGGSPISWKTKKQHTVS 256
S TGY + LG S ISW++K+Q TVS
Sbjct: 1182 STTGYCVFLGPSLISWRSKRQKTVS 1206