BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00025951
         (552 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_004240282.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containi...    65   8e-09
gb|EMJ23653.1| hypothetical protein PRUPE_ppa006191mg [Prunus pe...    60   5e-07
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...    60   5e-07
ref|XP_006372218.1| hypothetical protein POPTR_0018s14360g [Popu...    57   4e-06
ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|5...    57   4e-06

>ref|XP_006360648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like isoform X1 [Solanum tuberosum]
           gi|565389826|ref|XP_006360649.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like isoform X2 [Solanum tuberosum]
          Length = 416

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/72 (54%), Positives = 49/72 (68%)
 Frame = -2

Query: 227 KRVWQAKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSALM 48
           KR W+ KQ GN     N  DC  ++ GLSRK LP  AE  +L+M+S+GF  + STLSALM
Sbjct: 31  KRRWRMKQGGNIDPRGNYADCASLIQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALM 90

Query: 47  LCYANNRLFSEA 12
           LCYA+N LF +A
Sbjct: 91  LCYASNGLFYKA 102


>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = -2

Query: 227 KRVWQAKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSALM 48
           K  W  KQ+ +    DN +D   ++  LSRK LPH A+  L +M+S+GF  N STLSALM
Sbjct: 38  KLFWHWKQERSVDGKDNYVDYTPLIQALSRKRLPHVAQELLFEMKSEGFLPNNSTLSALM 97

Query: 47  LCYANNRLFSEAQVI 3
           LCYA+N LF +AQ +
Sbjct: 98  LCYADNGLFPKAQAL 112


>ref|XP_004240282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Solanum lycopersicum]
          Length = 381

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 36/66 (54%), Positives = 44/66 (66%)
 Frame = -2

Query: 209 KQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSALMLCYANN 30
           KQ GN     N  DC  ++ GLSRK LP  AE  +L+M+S+GF  + STLSALMLCYA N
Sbjct: 2   KQGGNIDPRINYRDCASLIQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYATN 61

Query: 29  RLFSEA 12
            LF +A
Sbjct: 62  GLFCKA 67


>ref|XP_006360650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like isoform X3 [Solanum tuberosum]
          Length = 409

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -2

Query: 212 AKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSALMLCYAN 33
           A++ GN     N  DC  ++ GLSRK LP  AE  +L+M+S+GF  + STLSALMLCYA+
Sbjct: 29  AQKGGNIDPRGNYADCASLIQGLSRKKLPVAAERLVLEMKSEGFVPDSSTLSALMLCYAS 88

Query: 32  NRLFSEA 12
           N LF +A
Sbjct: 89  NGLFYKA 95


>gb|EMJ23653.1| hypothetical protein PRUPE_ppa006191mg [Prunus persica]
          Length = 423

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = -2

Query: 224 RVWQAKQ--DGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSAL 51
           R W+ ++  DG G      +DC  ++  LSR+ +PH A+  +L+M+S G   + STLSAL
Sbjct: 41  RKWKQEECFDGKGIY----VDCVPLIRSLSRQKMPHVAQELVLEMKSDGLLPSNSTLSAL 96

Query: 50  MLCYANNRLFSEAQVI 3
           MLC+ANN LF +A+ I
Sbjct: 97  MLCHANNGLFPQAEAI 112


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 33/75 (44%), Positives = 48/75 (64%)
 Frame = -2

Query: 227 KRVWQAKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSALM 48
           K ++Q KQD + S  +  +DC  +V  L  K  PH A+  LL+M+S+G+  N  TLSA++
Sbjct: 44  KIIYQWKQDQSFSCKE--VDCASLVQNLHSKRTPHLAQEILLEMKSQGYVLNNPTLSAIL 101

Query: 47  LCYANNRLFSEAQVI 3
           LCYA+N L  +AQ I
Sbjct: 102 LCYADNGLLPQAQAI 116


>ref|XP_006372218.1| hypothetical protein POPTR_0018s14360g [Populus trichocarpa]
           gi|550318749|gb|ERP50015.1| hypothetical protein
           POPTR_0018s14360g [Populus trichocarpa]
          Length = 392

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = -2

Query: 245 KEIVVWKRVWQAKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNIS 66
           K  +  K + Q K+D      + C DC  ++  L +   PH AE  LL+++ +GF  +  
Sbjct: 36  KRALAQKMIRQWKRDQGVFGKETCADCASLIQTLCKHRRPHLAEELLLELKCEGFLPDNR 95

Query: 65  TLSALMLCYANNRLFSEAQVI 3
           TLSA+MLCYA++ L  +AQ I
Sbjct: 96  TLSAMMLCYADSGLLPQAQAI 116


>ref|XP_004301396.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Fragaria vesca subsp. vesca]
          Length = 424

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/74 (40%), Positives = 46/74 (62%)
 Frame = -2

Query: 224 RVWQAKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNISTLSALML 45
           R W+ ++   G   D  +DC  ++  LSR+ +PH A+  LL M+S+G   + STLSA+ML
Sbjct: 42  RTWKQEECSRGK--DCYVDCVPLIQSLSRQKMPHVAQEVLLVMKSEGLIPSNSTLSAVML 99

Query: 44  CYANNRLFSEAQVI 3
           C+A N L  +A+ I
Sbjct: 100 CHAKNGLLPQAEAI 113


>ref|XP_002331436.1| predicted protein [Populus trichocarpa]
           gi|566215849|ref|XP_006372219.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550318750|gb|ERP50016.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 428

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = -2

Query: 245 KEIVVWKRVWQAKQDGNGSLGDNCMDCGWIVPGLSRKCLPHEAEGFLLKMRSKGFRSNIS 66
           K  +  K + Q K+D      + C DC  ++  L +   PH AE  LL+++ +GF  +  
Sbjct: 36  KRALAQKMIRQWKRDQGVFGKETCADCASLIQTLCKHRRPHLAEELLLELKCEGFLPDNR 95

Query: 65  TLSALMLCYANNRLFSEAQVI 3
           TLSA+MLCYA++ L  +AQ I
Sbjct: 96  TLSAMMLCYADSGLLPQAQAI 116