BLASTX nr result
ID: Catharanthus22_contig00025691
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00025691 (350 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso... 184 1e-44 ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 181 7e-44 ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 177 1e-42 ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 177 1e-42 ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso... 174 8e-42 ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 174 1e-41 ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul... 174 1e-41 ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part... 174 1e-41 dbj|BAF03494.1| XRCC4 homolog [Populus nigra] 172 3e-41 ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr... 171 9e-41 ref|XP_002315726.1| predicted protein [Populus trichocarpa] 171 9e-41 ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 169 3e-40 emb|CBI26376.3| unnamed protein product [Vitis vinifera] 169 3e-40 gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 169 5e-40 ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 168 8e-40 gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The... 167 1e-39 ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu... 159 3e-37 gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Th... 158 8e-37 gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Th... 157 1e-36 ref|XP_004981829.1| PREDICTED: DNA repair protein XRCC4-like [Se... 157 1e-36 >ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum tuberosum] Length = 267 Score = 184 bits (466), Expect = 1e-44 Identities = 89/106 (83%), Positives = 97/106 (91%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKCQPS NSKKTTADILDFLMDANIRLS+EVV KT+SFER+KVEA Sbjct: 95 LSWTFEKEGTKLEWRWKCQPSSNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEA 154 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 EKCL QSE+LS+EK EFES IY KF+GVLN+KK KLRELRD+LSKQ Sbjct: 155 EKCLTQSEKLSREKEEFESAIYAKFLGVLNSKKKKLRELRDKLSKQ 200 >ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum lycopersicum] Length = 254 Score = 181 bits (460), Expect = 7e-44 Identities = 89/106 (83%), Positives = 95/106 (89%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKCQ S NSKKTTADILDFLMDANIRLS+EVV KT+SFER+KVEA Sbjct: 95 LSWTFEKEGTKLEWRWKCQSSSNSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEA 154 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 EKCL QSE+LSKEK EFES IY KF+GVLN KK KLRELRD+LSKQ Sbjct: 155 EKCLTQSEKLSKEKEEFESAIYAKFLGVLNAKKKKLRELRDKLSKQ 200 >ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis] Length = 256 Score = 177 bits (450), Expect = 1e-42 Identities = 87/106 (82%), Positives = 93/106 (87%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKC P+PNSKK TA ILDFLMDANIRLS+EVV KT SFERLKVEA Sbjct: 93 LSWTFEKEGTKLEWRWKCGPAPNSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEA 152 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 EKCLAQSE + EK EFES IY KF+GVLN+KKSKLRELRD+LSKQ Sbjct: 153 EKCLAQSERFNNEKLEFESAIYAKFLGVLNSKKSKLRELRDKLSKQ 198 >ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum] Length = 255 Score = 177 bits (449), Expect = 1e-42 Identities = 84/108 (77%), Positives = 96/108 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEKGG+ L WRWKC SP+ KKTTA ILDFLMDANIRLSEEVVRKTD FE+ KVEA Sbjct: 94 LSWTFEKGGMTLHWRWKCMQSPDCKKTTAQILDFLMDANIRLSEEVVRKTDLFEKTKVEA 153 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQKN 325 EKCLAQSE ++ E+ +FES+IYTKF+GVLN+KK+KLRELRD+LSKQ N Sbjct: 154 EKCLAQSERIANERVDFESQIYTKFLGVLNSKKAKLRELRDQLSKQDN 201 >ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca subsp. vesca] Length = 259 Score = 174 bits (442), Expect = 8e-42 Identities = 82/107 (76%), Positives = 95/107 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTF+K G KLEWRWKC+PSPNSK+TTA +LDFLMDAN+ LSEEVVRKT SFERLKVEA Sbjct: 98 LSWTFDKEGTKLEWRWKCEPSPNSKETTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEA 157 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 E CL QSE ++ EK EFES +Y KF+GVLN+KK+KLRELRD+LSKQ+ Sbjct: 158 EMCLIQSERIANEKIEFESAVYAKFLGVLNSKKTKLRELRDKLSKQE 204 >ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina] gi|557522035|gb|ESR33402.1| hypothetical protein CICLE_v10005690mg [Citrus clementina] Length = 256 Score = 174 bits (441), Expect = 1e-41 Identities = 86/106 (81%), Positives = 91/106 (85%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKC +PNSKK TA ILDFLMDANIRLS+EVV KT SFERLKVEA Sbjct: 94 LSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEA 153 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 EKCLAQSE EK EFES IY KF+GVLN+KKSKLRELRD+LSKQ Sbjct: 154 EKCLAQSERFKNEKLEFESAIYAKFLGVLNSKKSKLRELRDKLSKQ 199 >ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula] gi|355479842|gb|AES61045.1| DNA repair protein XRCC4 [Medicago truncatula] Length = 256 Score = 174 bits (441), Expect = 1e-41 Identities = 83/108 (76%), Positives = 96/108 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEKGG+ L WRWKC SP+ KKTTA+ILDFLMDANIRLSEEVV KT+ FE+ KVEA Sbjct: 94 LSWTFEKGGMTLHWRWKCMKSPDCKKTTAEILDFLMDANIRLSEEVVIKTELFEKTKVEA 153 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQKN 325 EKCLAQSE ++ E+ EFES+IYTKF+GVLN+KK+KLRELRD+LSKQ N Sbjct: 154 EKCLAQSERIANERVEFESQIYTKFLGVLNSKKAKLRELRDQLSKQGN 201 >ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina] gi|557522045|gb|ESR33412.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina] Length = 243 Score = 174 bits (440), Expect = 1e-41 Identities = 85/106 (80%), Positives = 91/106 (85%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKC +PNSKK TA ILDFLMDANIRLS+EVV KT SFERLKVEA Sbjct: 80 LSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEA 139 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 EKCLAQSE EK EFES +Y KF+GVLN+KKSKLRELRD+LSKQ Sbjct: 140 EKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDKLSKQ 185 >dbj|BAF03494.1| XRCC4 homolog [Populus nigra] Length = 255 Score = 172 bits (437), Expect = 3e-41 Identities = 83/107 (77%), Positives = 95/107 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKCQPSP++KKTT ILDFLMDANIRLSEEVVRKT SFERLK EA Sbjct: 93 LSWTFEKEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEA 152 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 EKCLAQSE+ + +K EFE+ +Y KF+GVLN+KK KLRELRD+LSK++ Sbjct: 153 EKCLAQSEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRDQLSKKE 199 >ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina] gi|557522040|gb|ESR33407.1| hypothetical protein CICLE_v10005689mg [Citrus clementina] Length = 256 Score = 171 bits (433), Expect = 9e-41 Identities = 84/106 (79%), Positives = 91/106 (85%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWK P+PNSKK TA ILDFLMDANIRLS+EVV KT SFERLKVE Sbjct: 93 LSWTFEKEGTKLEWRWKFGPAPNSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVET 152 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 +KCLAQSE EK EFES IY+KF+GVLN+KKSKLRELRD+LSKQ Sbjct: 153 QKCLAQSERFKNEKVEFESAIYSKFLGVLNSKKSKLRELRDKLSKQ 198 >ref|XP_002315726.1| predicted protein [Populus trichocarpa] Length = 233 Score = 171 bits (433), Expect = 9e-41 Identities = 82/107 (76%), Positives = 95/107 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKCQPSP++KKTT ILDFLMDANIRLSEEVVRKT SFE+LK EA Sbjct: 93 LSWTFEKEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEA 152 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 EKCLAQSE+ + +K EFE+ +Y KF+GVLN+KK KLRELRD+LSK++ Sbjct: 153 EKCLAQSEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRDQLSKKE 199 >ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera] Length = 259 Score = 169 bits (428), Expect = 3e-40 Identities = 82/107 (76%), Positives = 95/107 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKC SP+S+ TTA +LDFLM+ANIRLSEEVV KT SFERLKVEA Sbjct: 95 LSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEA 154 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 EKCLAQSE+ + EKAEFES IY KF+GVLN+KK+KLRELRD++SK++ Sbjct: 155 EKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQISKEE 201 >emb|CBI26376.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 169 bits (428), Expect = 3e-40 Identities = 82/107 (76%), Positives = 95/107 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKC SP+S+ TTA +LDFLM+ANIRLSEEVV KT SFERLKVEA Sbjct: 95 LSWTFEKEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEA 154 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 EKCLAQSE+ + EKAEFES IY KF+GVLN+KK+KLRELRD++SK++ Sbjct: 155 EKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQISKEE 201 >gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] Length = 257 Score = 169 bits (427), Expect = 5e-40 Identities = 81/105 (77%), Positives = 93/105 (88%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KL+WRWKCQP+P+SKKTTA+ LDFLMDANIRLSEEVV K+ SFERLKVEA Sbjct: 94 LSWTFEKEGTKLQWRWKCQPAPDSKKTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEA 153 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSK 316 EKCL QSE++S EK EFES +Y KF+GVLN+KK+KLRELR +L K Sbjct: 154 EKCLEQSEKISNEKMEFESTLYAKFLGVLNSKKAKLRELRAQLEK 198 >ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis] gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4, putative [Ricinus communis] Length = 265 Score = 168 bits (425), Expect = 8e-40 Identities = 81/107 (75%), Positives = 92/107 (85%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWKCQPSP++K TTA ILDFLMDANIRLSEEVV+KT SFERLK EA Sbjct: 100 LSWTFEKEGTKLEWRWKCQPSPDNKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEA 159 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 +KCL QSE + EK EFES IY KF+ VLN+KK KLR+LRD+LSK++ Sbjct: 160 DKCLTQSERFAGEKTEFESSIYAKFLAVLNSKKRKLRQLRDQLSKKE 206 >gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao] Length = 263 Score = 167 bits (423), Expect = 1e-39 Identities = 82/107 (76%), Positives = 92/107 (85%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSW FEK G KLEWRWK +PSP+S+K T ILDFLMDANIRLSEEV RKT SFE+LKVEA Sbjct: 98 LSWAFEKEGTKLEWRWKFRPSPDSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEA 157 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 EKCL QSE + EK EFESEIY KF+GVLN+KK+KLRELRD+LSKQ+ Sbjct: 158 EKCLEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQE 204 >ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus] gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus] Length = 233 Score = 159 bits (403), Expect = 3e-37 Identities = 76/106 (71%), Positives = 90/106 (84%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTF+K G+KLEWRWKCQP+ ++K TTA IL+FLMDANIRLSEEVVRK S ERLK E+ Sbjct: 99 LSWTFDKEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAES 158 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 EKCLAQSE++ EK EFE+ IY KF+ VLN KK+KLRE RD+LS+Q Sbjct: 159 EKCLAQSEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ 204 >gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao] Length = 276 Score = 158 bits (399), Expect = 8e-37 Identities = 82/120 (68%), Positives = 92/120 (76%), Gaps = 13/120 (10%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLS-------------EEVV 142 LSW FEK G KLEWRWK +PSP+S+K T ILDFLMDANIRLS EEV Sbjct: 98 LSWAFEKEGTKLEWRWKFRPSPDSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVF 157 Query: 143 RKTDSFERLKVEAEKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQK 322 RKT SFE+LKVEAEKCL QSE + EK EFESEIY KF+GVLN+KK+KLRELRD+LSKQ+ Sbjct: 158 RKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQE 217 >gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao] Length = 277 Score = 157 bits (398), Expect = 1e-36 Identities = 82/121 (67%), Positives = 92/121 (76%), Gaps = 14/121 (11%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLS--------------EEV 139 LSW FEK G KLEWRWK +PSP+S+K T ILDFLMDANIRLS EEV Sbjct: 98 LSWAFEKEGTKLEWRWKFRPSPDSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEV 157 Query: 140 VRKTDSFERLKVEAEKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSKQ 319 RKT SFE+LKVEAEKCL QSE + EK EFESEIY KF+GVLN+KK+KLRELRD+LSKQ Sbjct: 158 FRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQ 217 Query: 320 K 322 + Sbjct: 218 E 218 >ref|XP_004981829.1| PREDICTED: DNA repair protein XRCC4-like [Setaria italica] Length = 281 Score = 157 bits (397), Expect = 1e-36 Identities = 73/105 (69%), Positives = 91/105 (86%) Frame = +2 Query: 2 LSWTFEKGGIKLEWRWKCQPSPNSKKTTADILDFLMDANIRLSEEVVRKTDSFERLKVEA 181 LSWTFEK G KLEWRWK QPSPN+++T ++ILDFLMDANIRLSEEVVRKT SF++LK EA Sbjct: 109 LSWTFEKQGTKLEWRWKLQPSPNAQQTISEILDFLMDANIRLSEEVVRKTQSFDKLKQEA 168 Query: 182 EKCLAQSEELSKEKAEFESEIYTKFIGVLNTKKSKLRELRDRLSK 316 EKCL QSE + EKAEFE ++KF+ VLN+KK+KLR+LRD++++ Sbjct: 169 EKCLQQSERFNNEKAEFEQATFSKFVAVLNSKKTKLRQLRDKVAE 213