BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00025649
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233195.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
ref|XP_006353048.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
gb|EXB75175.1| hypothetical protein L484_025954 [Morus notabilis]      73   3e-11
emb|CBI31086.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]    72   8e-11
ref|XP_006468372.1| PREDICTED: pentatricopeptide repeat-containi...    69   6e-10
ref|XP_006448816.1| hypothetical protein CICLE_v10014257mg [Citr...    69   6e-10
ref|XP_004503357.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|NP_193861.1| pentatricopeptide repeat-containing protein [Ar...    59   5e-07
emb|CAA17548.1| putative protein [Arabidopsis thaliana]                59   5e-07
gb|ESW10516.1| hypothetical protein PHAVU_009G216300g [Phaseolus...    59   7e-07
ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_006413798.1| hypothetical protein EUTSA_v10024394mg [Eutr...    59   9e-07
ref|XP_006587119.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>ref|XP_004233195.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Solanum lycopersicum]
          Length = 853

 Score =  106 bits (264), Expect = 4e-21
 Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 8/110 (7%)
 Frame = -1

Query: 308 KNLSVFKFRSIQTSTARPFVANFPY--------TEEALASKIAPLLVSCSTPGLNGSSLH 153
           KN+     RSI  + A     N P+        TEE LASK+AP+L SC++   N   L 
Sbjct: 6   KNICSIYRRSISVAAAFSSKPNSPFIQDSVIHCTEEVLASKLAPILQSCNSSAEN---LG 62

Query: 152 SIMRRGQQVHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
           S++R+G+QVHAQ+TVNGI+NLGILGTRILGMY+LCN+  DA  LF+QL L
Sbjct: 63  SVIRKGEQVHAQVTVNGIDNLGILGTRILGMYVLCNRFIDAKKLFFQLRL 112


>ref|XP_006353048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Solanum tuberosum]
          Length = 852

 Score =  103 bits (258), Expect = 2e-20
 Identities = 57/110 (51%), Positives = 73/110 (66%), Gaps = 8/110 (7%)
 Frame = -1

Query: 308 KNLSVFKFRSIQTSTARPFVANFPY--------TEEALASKIAPLLVSCSTPGLNGSSLH 153
           KN+     RSI  + A     N P+        TE+ LASK+AP+L SC+    N   L 
Sbjct: 6   KNICSIFRRSISVAAAFSSKPNSPFFQDSAFHNTEQVLASKLAPILQSCTNSTEN---LG 62

Query: 152 SIMRRGQQVHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
           S++R+G+QVHAQ+TVNGI+NLGILGTRILGMY+LCN+  DA  LF+QL L
Sbjct: 63  SVLRKGEQVHAQVTVNGIDNLGILGTRILGMYVLCNRFIDAKKLFFQLQL 112


>gb|EXB75175.1| hypothetical protein L484_025954 [Morus notabilis]
          Length = 850

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/86 (39%), Positives = 56/86 (65%)
 Frame = -1

Query: 260 RPFVANFPYTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQVHAQITVNGINNLGIL 81
           +PF+ NFP TEEAL +    +L +C          H+++++G+Q+HAQ+  NGI+   ++
Sbjct: 36  KPFI-NFPRTEEALTNHFLSILQACCD--------HALLQQGRQIHAQVIANGISRKNLI 86

Query: 80  GTRILGMYILCNKHSDANNLFYQLNL 3
           GT+IL +Y+LC     A N+FY+L+L
Sbjct: 87  GTKILAVYVLCGSFLYAKNVFYRLDL 112


>emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = -1

Query: 299 SVFKFRSIQTSTA---RPFVANFPYTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQ 129
           + FK +S  T++    +P   +  + +++LA ++  +L +C+ P        S + +G+Q
Sbjct: 17  TTFKLKSFHTNSVNIGKPLQFSI-HNDDSLAPQLVSILQTCTDP--------SGLSQGRQ 67

Query: 128 VHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
            HAQ+ VNGI   GILGT++LGMY+LC    DA N+FYQL L
Sbjct: 68  AHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109


>ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = -1

Query: 299 SVFKFRSIQTSTA---RPFVANFPYTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQ 129
           + FK +S  T++    +P   +  + +++LA ++  +L +C+ P        S + +G+Q
Sbjct: 17  TTFKLKSFHTNSVNIGKPLQFSI-HNDDSLAPQLVSILQTCTDP--------SGLSQGRQ 67

Query: 128 VHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
            HAQ+ VNGI   GILGT++LGMY+LC    DA N+FYQL L
Sbjct: 68  AHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109


>emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = -1

Query: 299 SVFKFRSIQTST---ARPFVANFPYTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQ 129
           + FK +S  T++    +P   +  + +++LA ++  +L +C+ P        S +  G+Q
Sbjct: 17  TTFKLKSFHTNSINIGKPLQFSI-HNDDSLAPQLVSILQTCTDP--------SGLSHGRQ 67

Query: 128 VHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
            HAQ+ VNGI   GILGT++LGMY+LC    DA N+FYQL L
Sbjct: 68  AHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109


>ref|XP_006468372.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Citrus sinensis]
          Length = 847

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
 Frame = -1

Query: 338 MYSR---SSIAACKNLSVFKFRSIQTSTAR--PFVANFPYTEEALASKIAPLLVSCSTPG 174
           MY R   SS       S FK +SI ++       + +   T+ ALAS +  +L +C+   
Sbjct: 1   MYQRLITSSHKCLSTFSAFKCKSIHSNCEHFTNQLVSSHKTDTALASHLGSILEACAD-- 58

Query: 173 LNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
                 HS++++G+QVH+Q  +NGI++   LG +ILGMY+LC    DA N+F +L+L
Sbjct: 59  ------HSVLQQGRQVHSQFILNGISDNAALGAKILGMYVLCGGFIDAGNMFPRLDL 109


>ref|XP_006448816.1| hypothetical protein CICLE_v10014257mg [Citrus clementina]
           gi|557551427|gb|ESR62056.1| hypothetical protein
           CICLE_v10014257mg [Citrus clementina]
          Length = 848

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
 Frame = -1

Query: 338 MYSRSSIAACKNLSVF---KFRSIQTSTAR--PFVANFPYTEEALASKIAPLLVSCSTPG 174
           MY R   ++ K LS+F   K +SI ++       + +   T+ ALAS +  +L +C+   
Sbjct: 1   MYQRLITSSHKCLSIFSAFKCKSIHSNCEHFTNQLVSSHKTDTALASHLGSILEACAD-- 58

Query: 173 LNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
                 HS++++G+QVH+Q  +NGI++   LG +ILGMY+LC    DA N+F +L+L
Sbjct: 59  ------HSVLQQGRQVHSQFILNGISDNAALGAKILGMYVLCGGFIDAGNMFPRLDL 109


>ref|XP_004503357.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cicer arietinum]
          Length = 875

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/78 (38%), Positives = 52/78 (66%)
 Frame = -1

Query: 236 YTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMY 57
           + E++LA+++  +   CS          S+++R +Q+HA + V+G+++   LG+RILGMY
Sbjct: 65  FFEQSLAAQLECMFRDCSNFDA------SMVQRVRQIHAHVVVSGMSDSLTLGSRILGMY 118

Query: 56  ILCNKHSDANNLFYQLNL 3
           ILC + +DA NLF++L L
Sbjct: 119 ILCGRFNDAGNLFFRLQL 136


>ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g21300 gi|3402749|emb|CAA20195.1| putative protein
           [Arabidopsis thaliana] gi|7268926|emb|CAB79129.1|
           putative protein [Arabidopsis thaliana]
           gi|332659037|gb|AEE84437.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/78 (38%), Positives = 45/78 (57%)
 Frame = -1

Query: 236 YTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMY 57
           + EE +  +++ LL +CS P L        +R+G+QVHA + VN I+       RILGMY
Sbjct: 29  FLEETIPRRLSLLLQACSNPNL--------LRQGKQVHAFLIVNSISGDSYTDERILGMY 80

Query: 56  ILCNKHSDANNLFYQLNL 3
            +C   SD   +FY+L+L
Sbjct: 81  AMCGSFSDCGKMFYRLDL 98


>emb|CAA17548.1| putative protein [Arabidopsis thaliana]
          Length = 434

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/78 (38%), Positives = 45/78 (57%)
 Frame = -1

Query: 236 YTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMY 57
           + EE +  +++ LL +CS P L        +R+G+QVHA + VN I+       RILGMY
Sbjct: 29  FLEETIPRRLSLLLQACSNPNL--------LRQGKQVHAFLIVNSISGDSYTDERILGMY 80

Query: 56  ILCNKHSDANNLFYQLNL 3
            +C   SD   +FY+L+L
Sbjct: 81  AMCGSFSDCGKMFYRLDL 98


>gb|ESW10516.1| hypothetical protein PHAVU_009G216300g [Phaseolus vulgaris]
          Length = 848

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = -1

Query: 338 MYSRSSIAACKNL--SVFKFRSIQTSTARPFVANF----PYTEEALASKIAPLLVSCSTP 177
           MY+ S++ +   L  S  KF    T+     ++      P T+++L   +  L  +CS  
Sbjct: 1   MYNTSNLCSIFRLAFSRSKFMHTATNICNNVISKSHLLPPETQDSLTPHLESLFRACSDA 60

Query: 176 GLNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
                   S++++ +QVH Q+ V G++++  L +RILG+Y+LC +  DA NLF++L L
Sbjct: 61  --------SLLQQVRQVHTQVVVGGMSDVCSLSSRILGLYVLCGRIKDAENLFFRLEL 110


>ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/83 (34%), Positives = 51/83 (61%)
 Frame = -1

Query: 251 VANFPYTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQVHAQITVNGINNLGILGTR 72
           V + P T++ L +++  L  +CS          S++++ +QVH QI V G++++  L +R
Sbjct: 33  VMSKPETQDYLTTQLESLFRACSDA--------SVVQQARQVHTQIIVGGMSDVCALSSR 84

Query: 71  ILGMYILCNKHSDANNLFYQLNL 3
           +LG+Y+LC + SD  NLF+ L L
Sbjct: 85  VLGLYVLCGRISDGGNLFFGLEL 107


>ref|XP_006413798.1| hypothetical protein EUTSA_v10024394mg [Eutrema salsugineum]
           gi|557114968|gb|ESQ55251.1| hypothetical protein
           EUTSA_v10024394mg [Eutrema salsugineum]
          Length = 842

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = -1

Query: 257 PFVANFPYTEEALASKIAPLLVSCSTPGLNGSSLHSIMRRGQQVHAQITVNGINNLGILG 78
           P   +  Y  E+L  ++  LL SCS          +++R+G+QVHA + VN +++   + 
Sbjct: 21  PMEYSSQYLVESLPRRLTLLLQSCSDS--------TLLRQGKQVHAFLIVNRVSSESYMA 72

Query: 77  TRILGMYILCNKHSDANNLFYQLNL 3
            RILGMY +C   SD   LFY+L+L
Sbjct: 73  ERILGMYAMCGSFSDCGKLFYRLDL 97


>ref|XP_006587119.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like isoform X2 [Glycine max]
           gi|571476945|ref|XP_003535029.2| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21300-like isoform X1 [Glycine max]
          Length = 848

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
 Frame = -1

Query: 338 MYSRSS-IAACKNLSVFKFRSIQTSTA----RPFVANFPYTEEALASKIAPLLVSCSTPG 174
           MY+R++ + +   LS  + + + T+T        V   P T ++L +++  L  +CS   
Sbjct: 1   MYNRTTNLCSIFRLSFSRSKLMHTATTSICNNNNVMAKPETLDSLTTQLESLFRACSDA- 59

Query: 173 LNGSSLHSIMRRGQQVHAQITVNGINNLGILGTRILGMYILCNKHSDANNLFYQLNL 3
                  S++++ +QVH Q+ V G+ ++    +R+LG+Y+LC +  DA NLF++L L
Sbjct: 60  -------SMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELEL 109