BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00025488
         (338 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359787.1| PREDICTED: pentatricopeptide repeat-containi...   129   4e-28
ref|XP_004248795.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
gb|EOX98710.1| Tetratricopeptide repeat-like superfamily protein...    99   4e-19
gb|EXB57865.1| hypothetical protein L484_001062 [Morus notabilis]      98   1e-18
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_006597358.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containi...    95   1e-17
gb|AFK33523.1| unknown [Lotus japonicus]                               95   1e-17
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_004499170.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_006287851.1| hypothetical protein CARUB_v10001077mg [Caps...    92   7e-17
ref|XP_006492603.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006287850.1| hypothetical protein CARUB_v10001077mg [Caps...    91   2e-16
emb|CBI40661.3| unnamed protein product [Vitis vinifera]               89   6e-16
ref|XP_006420841.1| hypothetical protein CICLE_v10006919mg [Citr...    89   8e-16
ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...    88   1e-15
ref|XP_004290423.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
gb|EPS68015.1| hypothetical protein M569_06760, partial [Genlise...    87   2e-15
ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arab...    86   4e-15

>ref|XP_006359787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Solanum tuberosum]
          Length = 400

 Score =  129 bits (324), Expect = 4e-28
 Identities = 71/110 (64%), Positives = 83/110 (75%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MAAR+IFL L RNA + R R+L RSF + +EVVY++    ++ E+G       E  DDLK
Sbjct: 1   MAARTIFLKLTRNA-RGRERSLFRSFTTTTEVVYEDSPNSSEEERG-------ETPDDLK 52

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRIFSLRLPKRSATN L RWV EGR I+ISDLR ISKELRKS+RFKHALE
Sbjct: 53  SRIFSLRLPKRSATNALQRWVGEGRLISISDLRHISKELRKSRRFKHALE 102


>ref|XP_004248795.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Solanum lycopersicum]
          Length = 437

 Score =  127 bits (320), Expect = 1e-27
 Identities = 73/111 (65%), Positives = 85/111 (76%)
 Frame = +3

Query: 6   SMAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDL 185
           SMAARSIFL L RNA + R ++L RSF + +EVVY++    ++ E+G       E  DDL
Sbjct: 38  SMAARSIFLKLTRNA-RGREKSLFRSFTT-TEVVYEDSPNSSEEERG-------EIPDDL 88

Query: 186 KSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           KSRIFSLRLPKRSATNVL RWV EGR I+ISDLR ISKELRKS+RFKHALE
Sbjct: 89  KSRIFSLRLPKRSATNVLQRWVGEGRVISISDLRHISKELRKSRRFKHALE 139


>gb|EOX98710.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 399

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 56/110 (50%), Positives = 72/110 (65%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MA+RS+FL+L R +S      LL S              GA + + ++  ++  + DDLK
Sbjct: 1   MASRSLFLSLRRRSSNCSLSRLLSS--------------GAASTEYVDEYLNNLETDDLK 46

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRIF LRLPKRSAT V+ +WV E  +++ISDLR ISKELRKSQRFKHALE
Sbjct: 47  SRIFWLRLPKRSATTVIEKWVGEDNRVSISDLRQISKELRKSQRFKHALE 96


>gb|EXB57865.1| hypothetical protein L484_001062 [Morus notabilis]
          Length = 203

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 59/116 (50%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   ASMAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDD-- 176
           A+MA+R++FLTL R      R     + NS     + + ET      G       E+D  
Sbjct: 83  AAMASRAVFLTLRRC-----REISSLADNSRPIPFFGKGETSRMFCSGTLRSYFVEEDSV 137

Query: 177 --DDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
             DD+KSRIF LRLPKRSATNVL RW+SEG +I+IS+LR ISK+LRKS R+KHALE
Sbjct: 138 ESDDVKSRIFRLRLPKRSATNVLQRWISEGNQISISELRQISKDLRKSHRYKHALE 193


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 399

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDE---TGAQAEKGIENGIHGEDDD 179
           MA RS+FL+L R +S           NSG   V        +GA +   +E  + G  DD
Sbjct: 1   MAHRSLFLSLRRFSSCR---------NSGLACVLNRTRFVSSGAVSSDLVEESVEG--DD 49

Query: 180 DLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           DL+SRIF LRLPKRSATNVL +WV +G  I +S LRDISKELR+SQR+KHALE
Sbjct: 50  DLRSRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALE 102


>ref|XP_006597358.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 394

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 57/110 (51%), Positives = 70/110 (63%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MA RS+FL+L RN+         R  +SG           A +   +E  + G  DDDL+
Sbjct: 1   MAHRSLFLSLRRNSGLACVLNRTRFVSSG-----------AVSSDLVEESVEG--DDDLR 47

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRIF LRLPKRSATNVL +WV +G  I +S LRDISKELR+SQR+KHALE
Sbjct: 48  SRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALE 97


>ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Cucumis sativus]
           gi|449478839|ref|XP_004155431.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Cucumis sativus]
          Length = 406

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDET------GAQAEKGIENGIHGE 170
           MA+R++FL  +RN     R  L +SF S    V+ E         GA   +  +  ++ E
Sbjct: 1   MASRALFLAFSRN-----RGFLNQSFKSTP--VFNEANVSNYCSHGALRSESFDESVNYE 53

Query: 171 DDDDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           + +DLKSRIF LRLPKRSA  VL RW SEG ++ I++LR+ISKELRK QR+KHALE
Sbjct: 54  EFNDLKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALE 109


>gb|AFK33523.1| unknown [Lotus japonicus]
          Length = 358

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 55/117 (47%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
 Frame = +3

Query: 9   MAARSIFLTLARNAS-------KERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHG 167
           MA RS+FL+L RN+          + R LL      S      D                
Sbjct: 1   MAYRSLFLSLRRNSGFISTNSHHHQSRCLLNRARFVSSGAVSTDFV-------------- 46

Query: 168 EDDDDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           E DDDL+SRI  LRLPKRSATN+LH+WV EG  + +S+LRDI+KELR+SQR+KHALE
Sbjct: 47  ESDDDLRSRILRLRLPKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALE 103


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial [Vitis vinifera]
          Length = 396

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 55/111 (49%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRR-ALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDL 185
           M  RS+FL L R    E+    LL S    SEV              +E   +  ++DDL
Sbjct: 1   MGTRSLFLGLTRQCISEKFAFRLLSSRTLRSEV--------------LEESPNSPENDDL 46

Query: 186 KSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           KSRIF LRLPKRS TNVL RW+ EG ++ IS+LR+ISKELR++QR+KHALE
Sbjct: 47  KSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALE 97


>ref|XP_004499170.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Cicer arietinum]
          Length = 407

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 58/120 (48%), Positives = 72/120 (60%), Gaps = 10/120 (8%)
 Frame = +3

Query: 9   MAARSIFLTLARNAS-------KERRRALL---RSFNSGSEVVYQEDETGAQAEKGIENG 158
           MA RS+F +L RN+          R  +LL   R  +SG+      +ET   AE      
Sbjct: 1   MAFRSLFQSLTRNSGLVNNAHHHHRSHSLLNASRFVSSGAVTSDYVEETPNSAE------ 54

Query: 159 IHGEDDDDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
                DDDL+SRI  LRLPKRSATNVL +W+ +G  I +S+LRDISKELR SQR+KHALE
Sbjct: 55  ----GDDDLRSRILRLRLPKRSATNVLQKWILQGNSIPVSELRDISKELRSSQRYKHALE 110


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Glycine max]
          Length = 395

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 55/110 (50%), Positives = 69/110 (62%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MA  S+FL+L RN+         R  +SG           A +   +E  + G DDD L+
Sbjct: 1   MAHCSLFLSLRRNSGLACLLNRTRFVSSG-----------AVSSDLVEESVEGVDDD-LR 48

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRIF LRLPKRSATNVL +WV +G  + +S LRDISKELR+SQR+KHALE
Sbjct: 49  SRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALE 98


>ref|XP_006287851.1| hypothetical protein CARUB_v10001077mg [Capsella rubella]
           gi|482556557|gb|EOA20749.1| hypothetical protein
           CARUB_v10001077mg [Capsella rubella]
          Length = 412

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKG---IENGIHGEDDD 179
           MA RS+F TL R        A+  +F   +E         A A  G   ++  +  E+ D
Sbjct: 1   MATRSLFHTL-RCRLTNNNGAVGSNFIRNAESSRFSKPYSADAAIGGSLVDESLESEEKD 59

Query: 180 DLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           DL+SRIF LRLPKRSAT VL +WV EG +I +++LRDISKELR+++R+KHALE
Sbjct: 60  DLRSRIFRLRLPKRSATTVLEKWVGEGNQITVNELRDISKELRRTRRYKHALE 112


>ref|XP_006492603.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Citrus sinensis]
          Length = 408

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 55/113 (48%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQE---DETGAQAEKGIENGIHGEDDD 179
           MAARS FL L R ++ + +       NS SE  ++        +Q E   E   + +  D
Sbjct: 1   MAARSFFLGLRRASNTKIKNRP----NSDSESFFRSRFLSSGSSQNECLDEETSNSDGKD 56

Query: 180 DLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           DLKSRIF + LPKRSA NV+ RWVSEG +  +S+LR I KELRKSQR+KHALE
Sbjct: 57  DLKSRIFRISLPKRSAINVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109


>ref|XP_006287850.1| hypothetical protein CARUB_v10001077mg [Capsella rubella]
           gi|482556556|gb|EOA20748.1| hypothetical protein
           CARUB_v10001077mg [Capsella rubella]
          Length = 401

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/110 (45%), Positives = 70/110 (63%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MA RS+F TL  N  +    +      S    +      G+  ++ +E+    E+ DDL+
Sbjct: 1   MATRSLFHTLRCNFIRNAESSRFSKPYSADAAI-----GGSLVDESLES----EEKDDLR 51

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRIF LRLPKRSAT VL +WV EG +I +++LRDISKELR+++R+KHALE
Sbjct: 52  SRIFRLRLPKRSATTVLEKWVGEGNQITVNELRDISKELRRTRRYKHALE 101


>emb|CBI40661.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 41/64 (64%), Positives = 53/64 (82%)
 Frame = +3

Query: 147 IENGIHGEDDDDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFK 326
           +E   +  ++DDLKSRIF LRLPKRS TNVL RW+ EG ++ IS+LR+ISKELR++QR+K
Sbjct: 41  LEESPNSPENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYK 100

Query: 327 HALE 338
           HALE
Sbjct: 101 HALE 104


>ref|XP_006420841.1| hypothetical protein CICLE_v10006919mg [Citrus clementina]
           gi|557522714|gb|ESR34081.1| hypothetical protein
           CICLE_v10006919mg [Citrus clementina]
          Length = 377

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 54/110 (49%), Positives = 66/110 (60%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MAARS FL L R          L S +S +E + +E               + +  DDLK
Sbjct: 1   MAARSFFLGLRR---------FLSSGSSQNECLDEETS-------------NSDGKDDLK 38

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRIF + LPKRSATNV+ RWVSEG +  +S+LR I KELRKSQR+KHALE
Sbjct: 39  SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 88


>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 55/124 (44%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
 Frame = +3

Query: 3   ASMAARSIFLTLAR------------NASKERRRALLRSFNSGSEVVYQEDETGAQAEKG 146
           A MA+RS    L R            N+ K      L S    +EV+ +E  +       
Sbjct: 17  AVMASRSFLFNLQRICRINSGIGSLSNSKKWEFNHFLSSGTLRNEVLAEESSSK------ 70

Query: 147 IENGIHGEDDDDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFK 326
                  E +DDLKSRIF LRLPKRSATN++H WVSEG  +  S+LR+IS ELRK QR+K
Sbjct: 71  -------EIEDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYK 123

Query: 327 HALE 338
           HALE
Sbjct: 124 HALE 127


>ref|XP_004290423.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 385

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 54/110 (49%), Positives = 64/110 (58%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQEDETGAQAEKGIENGIHGEDDDDLK 188
           MA+RS+F+ L R  S      L RSF SG+                       ++ DDLK
Sbjct: 1   MASRSLFVNLRRKCSASNT-CLSRSFCSGAL---------------------SQEIDDLK 38

Query: 189 SRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           SRI  +RLPKRS TNVL RWV +G +I IS+LR ISKELR SQR KHALE
Sbjct: 39  SRILRVRLPKRSVTNVLERWVHQGNQITISELRQISKELRMSQRHKHALE 88


>gb|EPS68015.1| hypothetical protein M569_06760, partial [Genlisea aurea]
          Length = 365

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
 Frame = +3

Query: 42  RNASKERRRALLRSFNSGSE---VVYQEDETGAQAEKGIENGIHGEDDDDLKSRIFSLRL 212
           RN    R   ++RS  S  E   ++ ++DE+    +  +  G     +DDL++RIF  RL
Sbjct: 5   RNGGARRGNVVVRSIASSVEAGDLISRKDESNLADDDSLVEG-----NDDLRNRIFRERL 59

Query: 213 PKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           PKRS +NVL +W+ EGR+I  SDLR IS++LR+SQR+KHALE
Sbjct: 60  PKRSVSNVLQKWIDEGRRIEASDLRSISRDLRRSQRYKHALE 101


>ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
           lyrata] gi|297317210|gb|EFH47632.1| hypothetical protein
           ARALYDRAFT_487758 [Arabidopsis lyrata subsp. lyrata]
          Length = 410

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 55/117 (47%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
 Frame = +3

Query: 9   MAARSIFLTLARNASKERRRALLRSFNSGSEVVYQ-EDETGAQAEKGIENGIHG------ 167
           MA RS+F +L        R  L  +   GS  +   E  +G       +  I G      
Sbjct: 1   MATRSLFHSL--------RCRLTNNGVVGSNFIRNAESSSGFSKSYNADAAIGGSLVEES 52

Query: 168 EDDDDLKSRIFSLRLPKRSATNVLHRWVSEGRKIAISDLRDISKELRKSQRFKHALE 338
           E+ DDLKSRIF LRLPKRSAT VL RWV EG +I I++LR+ISKELR+++R KHALE
Sbjct: 53  EEKDDLKSRIFRLRLPKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALE 109