BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00025292
         (275 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    53   2e-06
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise...    50   3e-06
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    52   6e-06

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
 Frame = +1

Query: 22  FPSTLVSLIMRCVHSVRFFVLINSTQTASFLLSCGIA*RDPLSPYLFNIYAKSLFAMICH 201
           F    + LIM CV SVR+ VLIN T     + S G+   DPLSPYLF I  + L  M+  
Sbjct: 598 FADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQS 657

Query: 202 VERQSRFCVLTI---LVHLSHIFF 264
            E++++   L +      +SH+ F
Sbjct: 658 AEQKNQITGLKVARGAPPISHLLF 681



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 243 PSISHLLFADD 275
           P ISHLLFADD
Sbjct: 674 PPISHLLFADD 684


>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
          Length = 1651

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%)
 Frame = +1

Query: 22   FPSTLVSLIMRCVHSVRFFVLINSTQTASFLLSCGIA*RDPLSPYLFNIYAKSLFAMI 195
            FPS  + LIM  + SV + V+IN       L S GI   DPLSPYLF + A +L AMI
Sbjct: 910  FPSEFIDLIMLLISSVSYSVIINGAAVGRILPSRGIRQGDPLSPYLFILCADALSAMI 967



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +3

Query: 231  NHTCPSISHLLFADD 275
            N   P ISHLLFADD
Sbjct: 982  NPLAPKISHLLFADD 996


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 52.0 bits (123), Expect(2) = 6e-06
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = +1

Query: 22   FPSTLVSLIMRCVHSVRFFVLINSTQTASFLLSCGIA*RDPLSPYLFNIYAKSLFAMICH 201
            FP   V LIM CV SV + VL+          S G+   DP+SPYLF I A+ L A+I  
Sbjct: 886  FPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRK 945

Query: 202  VERQSRFCVLTI---LVHLSHIFF 264
             ER+ +   + I      +SH+F+
Sbjct: 946  AEREQQIHGVAIARGAPSVSHLFY 969



 Score = 23.5 bits (49), Expect(2) = 6e-06
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 243 PSISHLLFADD 275
           PS+SHL +ADD
Sbjct: 962 PSVSHLFYADD 972