BLASTX nr result
ID: Catharanthus22_contig00025255
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00025255
(1132 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 53 2e-08
gb|EMT20898.1| ADP-ribosylation factor GTPase-activating protein... 65 5e-08
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas... 45 5e-07
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea] 57 6e-07
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 51 6e-07
ref|XP_004297906.1| PREDICTED: putative ribonuclease H protein A... 56 4e-06
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group] 59 5e-06
gb|EMT03991.1| Zinc finger CCCH domain-containing protein 7 [Aeg... 56 5e-06
gb|AAX94970.1| retrotransposon protein, putative, unclassified [... 58 8e-06
gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japo... 58 8e-06
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 31/112 (27%), Positives = 50/112 (44%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKIPPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFFPP 459
+++ +G + IW+ RW+P+ +F+I E V DLI D W + L+Q F P
Sbjct: 569 WQVGSGDTIGIWEDRWLPQPNSFQIFSPRPEHSAITKVSDLIHGDSREWNAPLLQNVFFP 628
Query: 460 QIAREILKIRIPILEESDYLIWTPSATGRFSVNLFIEFESQRNISSGSGPSS 615
+ I I + + D L+W G F+V + S+G SS
Sbjct: 629 EEVMLIRSIPLSLRLTPDMLVWHYDKKGMFTVKSAYHVARSLHSSTGRASSS 680
Score = 33.5 bits (75), Expect(2) = 2e-08
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 71 FRNSLANNHASIGKLGWQLHVDLHKPRVQLVRSTHLRSRNFFDLNKCPQGASWVWKGIWD 250
FRN A N A + K GW+L + +++++ + +R+F + P AS VWK + D
Sbjct: 500 FRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVSPY-ASVVWKSLCD 558
Query: 251 CKS 259
++
Sbjct: 559 ART 561
>gb|EMT20898.1| ADP-ribosylation factor GTPase-activating protein AGD3 [Aegilops
tauschii]
Length = 1336
Score = 65.1 bits (157), Expect = 5e-08
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKIPPAYQEVVPFDS----VKDLIDQDLEIWKSGLVQY 447
+RI G+++ IW WIP+ N KI + P S V DLIDQ+ WK +
Sbjct: 923 WRICNGNSVRIWRDNWIPR-GNMKI-----NINPTSSRTRWVADLIDQESHAWKEDYIMR 976
Query: 448 FFPPQIAREILKIRIPILEESDYLIWTPSATGRFSVNLFIEFESQRNISSGS 603
F + A +IL IR+P +E DY+ W P FSV + + + + ++ GS
Sbjct: 977 VFTREDANDILSIRLPNYDEEDYIAWQPEKKLEFSVFVALAMDEKDSVVIGS 1028
>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 573
Score = 45.1 bits (105), Expect(2) = 5e-07
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFK---IPPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYF 450
++I GS +N+W WI + + K PP +Q + +V L+ D W + LVQ
Sbjct: 456 WKIGDGSKINVWSMPWIRNLLSLKPSTSPPLHQHDL---TVNSLLSADFNSWDTTLVQSL 512
Query: 451 FPPQIAREILKIRIPILEESDYLIWTPSATGRFSV 555
F A IL + SD IW + G ++V
Sbjct: 513 FNDAEAAAILSTPLFARSGSDVRIWKATVDGTYTV 547
Score = 36.6 bits (83), Expect(2) = 5e-07
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 71 FRNSLANNHASIGKLGWQLHVDLHKPRVQLVRSTHLRSRNFFDLNKCPQGASWVWKGIWD 250
FRN A N + +GK GW+L D +++++ + R+F D S+ W+ +W
Sbjct: 387 FRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLDAT-LGHNPSYTWRSLWS 445
Query: 251 CKS 259
+S
Sbjct: 446 TQS 448
>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
Length = 1255
Score = 57.4 bits (137), Expect(2) = 6e-07
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Frame = +1
Query: 295 GSNLNIWDTRWIPKIPNFKIPPAYQ--EVVPFDSVKDLIDQDLEIWKSGLVQYFFPPQIA 468
GS +NIW + W+P++ FK P Y+ E+ P V DLI+ W L+++ F P A
Sbjct: 824 GSQINIWSSPWLPRMGFFK--PIYKRPELPPTLRVSDLINPGTRDWNRSLIRHLFLPIDA 881
Query: 469 REILKIRIPILEESDYLIWTPSATGRFSVNLFIE--FESQRNISSGSGPSSLVIVVFGRS 642
IL I + D LIW S G +SV + + ++ G SS F +
Sbjct: 882 SSILSIPLGTGRHPDRLIWHFSKDGAYSVKSGYKRAWSTEHLRCPGPAHSSDTFSAFWKQ 941
Query: 643 ------------YGNQVC--MVQT*AILLENPNGVYSL*VQISSFLANELNCPICDQEEE 780
+ ++C ++ T A+L + + C +CDQEEE
Sbjct: 942 LWRIALPPKILLFAWRLCRNILPTKALLRRRN-------------VCRDSQCEVCDQEEE 988
Query: 781 RW 786
W
Sbjct: 989 NW 990
Score = 23.9 bits (50), Expect(2) = 6e-07
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 71 FRNSLANNHASIGKLGWQLHVDLHKPRVQLVRSTHLRSRNFF--DLNKCPQGASWVWKGI 244
FRN N A + K W++ + QL++ + R+ +F L + P S+ W+ +
Sbjct: 750 FRNLAIFNKALLAKQCWRILMKPDSLLAQLLKGKYYRNTSFLCASLGRSP---SFTWRSL 806
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 51.2 bits (121), Expect(2) = 6e-07
Identities = 31/112 (27%), Positives = 52/112 (46%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKIPPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFFPP 459
+++ +G + IW+ RW+P+ +F+I E V DLI D W L+Q F P
Sbjct: 817 WQVGSGDTIGIWEDRWLPQPNSFRIFFPKPEHSAITKVSDLIHGDSREWNVPLLQNVFFP 876
Query: 460 QIAREILKIRIPILEESDYLIWTPSATGRFSVNLFIEFESQRNISSGSGPSS 615
+ I I + + D L+W G F+V + R++ S +G +S
Sbjct: 877 EEVMLIRSIPLSLRLTPDMLVWHYDKKGMFTVK--SAYHVARSVHSSTGRAS 926
Score = 30.0 bits (66), Expect(2) = 6e-07
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 71 FRNSLANNHASIGKLGWQLHVDLHKPRVQLVRSTHLRSRNFFDLNKCPQGASWVWKGIWD 250
FRN A N A + K GW+L + +++++ + +R+F + AS VWK +++
Sbjct: 748 FRNLHAFNLALLAKQGWRLLQNPDSLITKVLKAKYFPTRSFLE-TAVSLHASVVWKSLYE 806
Query: 251 CKS 259
++
Sbjct: 807 ART 809
>ref|XP_004297906.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 341
Score = 56.2 bits (134), Expect(2) = 4e-06
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKI--PPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFF 453
+RI G+ +IW WIP+ P + I PP P++ V DL+ + W LV + F
Sbjct: 220 WRIGDGTKASIWKDAWIPECPKYLIQKPPH----TPYELVSDLLTPSKD-WNEQLVHHLF 274
Query: 454 PPQIAREILKIRIPILEESDYLIWTPSATGRFSV 555
PQ+A +I++I + + D W P G FSV
Sbjct: 275 HPQVAVQIMQIPLNRHDMQDSQYWAPDKKGFFSV 308
Score = 22.3 bits (46), Expect(2) = 4e-06
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 71 FRNSLANNHASIGKLGWQLHVDLHKPRVQLVRSTHLRSRNFFDLNKCPQGASWVWKGIWD 250
F+N A N A + K GW+ + ++ ++ + + +F D + S+ W+ I +
Sbjct: 151 FKNLYAYNLALLAKQGWRFMSQPNSLVTRVFKARYFPTISFQDA-QLGDNPSYPWRRILE 209
Query: 251 CKS 259
+S
Sbjct: 210 GRS 212
>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
Length = 1205
Score = 58.5 bits (140), Expect = 5e-06
Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKI--PPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFF 453
+RI GS IW W+ N KI + V+ V++LI D + W L+++
Sbjct: 912 WRIGDGSKTKIWRNHWVAHGENLKILEKKTWNRVI---YVRELIVTDTKTWNEPLIRHII 968
Query: 454 PPQIAREILKIRIPILEESDYLIWTPSATGRFSV--------NLFIEFESQRNISSG 600
+ A EILKIRIP EE D+ W TG FSV NL + Q + SSG
Sbjct: 969 REEDADEILKIRIPQREEEDFPAWHYEKTGIFSVRSVYRLAWNLARKTSEQASSSSG 1025
>gb|EMT03991.1| Zinc finger CCCH domain-containing protein 7 [Aegilops tauschii]
Length = 2392
Score = 55.8 bits (133), Expect(2) = 5e-06
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFK-IPPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFFP 456
+R+ GS+++IWD WIP N K I P Q +V D V+DLID W +++
Sbjct: 81 WRVGTGSHIDIWDDPWIPTSENRKVITPRGQAMV--DKVEDLIDPISGQWDEDILRSVLS 138
Query: 457 PQIAREILKIRIPILEESDYLIWTPSATGRFSVN--LFIEFESQ--RNISSGSGP 609
P IL+I + + +++ W + +G FSV +EF+ Q N + GP
Sbjct: 139 PVDVHRILQIPLRVEVMDNFVAWQHTRSGTFSVRSAYHVEFDHQFGHNWNQRGGP 193
Score = 22.3 bits (46), Expect(2) = 5e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 674 KQFFWKILTESIPC 715
K F WK+L +PC
Sbjct: 215 KHFVWKVLRGVLPC 228
>gb|AAX94970.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550533|gb|ABA93330.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 816
Score = 57.8 bits (138), Expect = 8e-06
Identities = 30/92 (32%), Positives = 44/92 (47%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKIPPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFFPP 459
+RI G L+IW WIP+ ++ V DL+ + + W GL++ F P
Sbjct: 194 WRIGKGDQLHIWRDNWIPRDHQLRVTGKRTRTC-LKWVADLVSPNNQEWDEGLIRQIFYP 252
Query: 460 QIAREILKIRIPILEESDYLIWTPSATGRFSV 555
EILKI++P D+L W P G F+V
Sbjct: 253 PYVDEILKIKLPESPTDDFLAWHPERLGVFTV 284
>gb|EEE62189.1| hypothetical protein OsJ_16976 [Oryza sativa Japonica Group]
Length = 653
Score = 57.8 bits (138), Expect = 8e-06
Identities = 30/92 (32%), Positives = 44/92 (47%)
Frame = +1
Query: 280 YRITAGSNLNIWDTRWIPKIPNFKIPPAYQEVVPFDSVKDLIDQDLEIWKSGLVQYFFPP 459
+RI G L+IW WIP+ ++ V DL+ + + W GL++ F P
Sbjct: 194 WRIGKGDQLHIWRDNWIPRDHQLRVTGKRTRTC-LKWVADLVSPNNQEWDEGLIRQIFYP 252
Query: 460 QIAREILKIRIPILEESDYLIWTPSATGRFSV 555
EILKI++P D+L W P G F+V
Sbjct: 253 PYVDEILKIKLPESPTDDFLAWHPERLGVFTV 284