BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00025245
         (1227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [...    47   6e-09
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]    48   3e-08
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     46   7e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    45   3e-06
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    40   4e-06
ref|XP_003612373.1| Glutamate receptor 3.6 [Medicago truncatula]...    41   6e-06
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    46   7e-06
gb|AFB73912.1| polyprotein [Citrus sinensis]                           45   7e-06
emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]    43   7e-06

>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 46.6 bits (109), Expect(2) = 6e-09
 Identities = 18/44 (40%), Positives = 33/44 (75%)
 Frame = -2

Query: 137 LAFDCNVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLF 6
           LA    VLRE+ ++++A  +W K E +Y+ KSL+N++Y+K++L+
Sbjct: 189 LALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLY 232



 Score = 41.6 bits (96), Expect(2) = 6e-09
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = -3

Query: 310 ETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICSPEEYPESWKGEVLKEKLGDAHSYLTL 134
           E ++F+G+ DF +WR KM+A+LVQ  +  A+   E  P +       + +  AHS + L
Sbjct: 131 EIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVILL 189


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score = 48.1 bits (113), Expect(2) = 3e-08
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = -2

Query: 137 LAFDCNVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLFG 3
           LA     LRE  E+  A  +W K E+LY+  SLSN++YLKE+L+G
Sbjct: 65  LALGDKALREFSEETTAKGVWNKLEQLYMQNSLSNRLYLKERLYG 109



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -3

Query: 310 ETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICSPEEYP 197
           E +RF GK DF +WR +MKA+L Q  +  A+    E P
Sbjct: 7   EIERFIGKNDFNVWRMRMKAILFQQGVKDALKDESELP 44


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 46.2 bits (108), Expect(2) = 7e-08
 Identities = 22/45 (48%), Positives = 33/45 (73%)
 Frame = -2

Query: 140 HLAFDCNVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLF 6
           HL  D  V+  I ++++A  IWTK E LY+ K+L+NK+YLK+QL+
Sbjct: 67  HLTDD--VVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLY 109



 Score = 38.5 bits (88), Expect(2) = 7e-08
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = -3

Query: 328 MSVPNIETDRFDG-KCDFVMWRRKMKAVLVQNKIAPAICSPEEYPESWKGEVLKEKLGDA 152
           MS    E  +F+G K  F MW+R+MK +L+Q  +  A+    + PES K E  +E    A
Sbjct: 1   MSGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKA 60

Query: 151 HSYLTLHST 125
            S + LH T
Sbjct: 61  ASAIRLHLT 69


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 44.7 bits (104), Expect(2) = 3e-06
 Identities = 18/40 (45%), Positives = 30/40 (75%)
 Frame = -2

Query: 122 NVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLFG 3
           +V+ E+ +++ A  +W K E LY+ KSL+NK+ LK++LFG
Sbjct: 67  DVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFG 106



 Score = 34.3 bits (77), Expect(2) = 3e-06
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = -3

Query: 328 MSVPNIETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICSPEEYPESWKGEVLKEKLGDAH 149
           MS  N++ D+F G+  F +W+ KM+A+L Q      +   +    + +  +L+EK   AH
Sbjct: 1   MSALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEK---AH 57

Query: 148 SYLTL 134
           S + L
Sbjct: 58  STIML 62


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 21/65 (32%), Positives = 34/65 (52%)
 Frame = -3

Query: 328 MSVPNIETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICSPEEYPESWKGEVLKEKLGDAH 149
           M     + ++F GK DF + R KM+A+LVQ  +  A+   +  P + + +   E L  AH
Sbjct: 1   MGTAKFDVEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAH 60

Query: 148 SYLTL 134
           S + L
Sbjct: 61  SAIIL 65



 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = -2

Query: 137 LAFDCNVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLF 6
           L+    VLRE  +  +A E+W K E LY+ KSL+N+++ K +L+
Sbjct: 65  LSLGDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLY 108


>ref|XP_003612373.1| Glutamate receptor 3.6 [Medicago truncatula]
           gi|355513708|gb|AES95331.1| Glutamate receptor 3.6
           [Medicago truncatula]
          Length = 449

 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 17/38 (44%), Positives = 29/38 (76%)
 Frame = -2

Query: 119 VLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLF 6
           VLR++ ++  A  IW+K E LY+ KSL+++ +LK+QL+
Sbjct: 70  VLRDVAKEPTAASIWSKLESLYMTKSLAHRQFLKQQLY 107



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = -3

Query: 310 ETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICSPEEYPESWKGEVLKEKLGDAHSYLTL 134
           + ++F G  DF +W+ KM+AVL+Q K   A+      P++   E   E +  A S + L
Sbjct: 6   DIEKFTGINDFGLWKVKMQAVLIQQKCEKALKGEGALPDTMSQEEKTEMMDKARSAIVL 64


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 46.2 bits (108), Expect(2) = 7e-06
 Identities = 22/45 (48%), Positives = 33/45 (73%)
 Frame = -2

Query: 140 HLAFDCNVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLF 6
           HL+ D  V+  I ++D A  IWT+ E LY+ K+L+NK+YLK+QL+
Sbjct: 66  HLSDD--VVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLY 108



 Score = 31.6 bits (70), Expect(2) = 7e-06
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -3

Query: 328 MSVPNIETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICSPEEYPESWKGEVLKEKLGDAH 149
           MS    E  +F+G   F  W+R+M+ +L+Q  +   +    + P++ K E   +    A 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 148 SYLTLH 131
           S + LH
Sbjct: 61  SAIRLH 66


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 45.4 bits (106), Expect(2) = 7e-06
 Identities = 23/45 (51%), Positives = 28/45 (62%)
 Frame = -2

Query: 140 HLAFDCNVLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQLF 6
           HLA    VL  + EK+ A EIW    KLY  KSL NKI+LK +L+
Sbjct: 59  HLALADGVLSSVAEKNTAKEIWDTLTKLYEAKSLHNKIFLKRKLY 103



 Score = 32.3 bits (72), Expect(2) = 7e-06
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 310 ETDRFDGKCDFVMWRRKMKAVLVQNKIAPAICS-PEEYPESWKGEVLKEKLGDAH 149
           E ++F+G  +F +W+ KMKAVL +N    AI   P E  +    EV    + D H
Sbjct: 6   EIEKFNGN-NFSLWKMKMKAVLRKNNCLAAIGERPMEITDDKWNEVDSNAISDLH 59


>emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]
          Length = 836

 Score = 43.1 bits (100), Expect(2) = 7e-06
 Identities = 18/37 (48%), Positives = 30/37 (81%)
 Frame = -2

Query: 119 VLREIDEKDNAFEIWTKSEKLYLGKSLSNKIYLKEQL 9
           VLRE+ +++ A ++W K E LY+ KSL+N++YLK++L
Sbjct: 522 VLREVAKENMATKLWLKLESLYMTKSLTNRLYLKKRL 558



 Score = 34.7 bits (78), Expect(2) = 7e-06
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 310 ETDRFDGKCDFVMWRRKMKAVLVQNKIA 227
           E ++FDG+ DF +WR KM A+LV  ++A
Sbjct: 500 EVEKFDGRNDFNLWRVKMXALLVLREVA 527