BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00025110
         (985 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   440   e-121
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   439   e-121
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              414   e-113
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   413   e-113
gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily p...   409   e-112
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     404   e-110
gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [...   403   e-110
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   395   e-107
ref|XP_002326829.1| predicted protein [Populus trichocarpa]           392   e-107
ref|XP_002889338.1| pentatricopeptide repeat-containing protein ...   391   e-106
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   390   e-106
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   389   e-106
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   387   e-105
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
gb|ESW10402.1| hypothetical protein PHAVU_009G206300g [Phaseolus...   384   e-104
ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutr...   384   e-104
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi...   383   e-104
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi...   383   e-104

>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  440 bits (1131), Expect = e-121
 Identities = 206/299 (68%), Positives = 258/299 (86%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           +AR +A +INT+ WS+ LE+S++ + QP +S TTVLHTLR IK PSKAL FF W  + GF
Sbjct: 49  KARKIATIINTNPWSSHLESSLSSITQPSLSHTTVLHTLRFIKIPSKALYFFNWTQKMGF 108

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            HT QSYLLMLQLL + R+ N+ARNFLLSIP++SNGAV L D++FN LI+++G+AGLF+E
Sbjct: 109 QHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNTLIQSYGKAGLFQE 168

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           SLKVF+ MKS+G+SPS VTFNSLF+IL KRGRTG+V+EL+DE+LKT+G KPD+YTFNILI
Sbjct: 169 SLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILI 228

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFC+NSMVD+GF+FFKEM+  +CEP+VITYNTIVDGLCRAGKV+IAHNV+KGM K+G  
Sbjct: 229 RGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMAKRGHQ 288

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+V+YTTL+RGYC KQE++ AL VF+EMI RGLKP  ITYNTL+ GLCEA+RF++I
Sbjct: 289 LSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRI 347



 Score =  108 bits (270), Expect = 3e-21
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
 Frame = -3

Query: 587 FNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELL 408
           FN LIR F    +  +  + F+ M+     P+ +T+N++   L + G+  I   +   + 
Sbjct: 224 FNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMA 283

Query: 407 KT-YGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGK 231
           K  + + P++ ++  L+RG+C    V+     F+EM     +P  ITYNT+V GLC A +
Sbjct: 284 KRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKR 343

Query: 230 VKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITY 51
                 +++G L  G   +P+  T+ TLI  +C    +DEA+ VF+ M+   +KP+  TY
Sbjct: 344 FDRIKEILEGTLGSGG-LIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATY 402

Query: 50  NTLIGGLCEARRFEK 6
           + LI   C+   F++
Sbjct: 403 SILIRSFCQKGYFDR 417



 Score = 90.5 bits (223), Expect = 9e-16
 Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
 Frame = -3

Query: 587 FNCLIRAFGEAGLFKESLKVFQ-TMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDEL 411
           +N L++   EA  F    ++ + T+ S G+ P   TFN+L +     G      ++++ +
Sbjct: 331 YNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENM 390

Query: 410 LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFK-------CEPDVITYNTIVD 252
           L    VKPD  T++ILIR FC     D   K F ++   +       C P +  YN + +
Sbjct: 391 LYLK-VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFE 449

Query: 251 GLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGL 72
             C+ GK K A  V + ++++G+        Y  LIRG+C +   ++A G+   M+ R  
Sbjct: 450 YFCKIGKTKKAEKVFRQLMRRGTQDP---FAYELLIRGHCKEGTFNDAHGLLVLMLRRDY 506

Query: 71  KPNDITYNTLIGGLCE 24
            PN + Y +LI GL +
Sbjct: 507 VPNIVIYESLIEGLLQ 522



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N L  + K+ +  +  +   +  L+R + E    + +L VF
Sbjct: 258 TYNTIVDGLCRAGKVEIAHNVLKGMAKRGH-QLSPNVVSYTTLVRGYCEKQEVERALDVF 316

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M   G+ P+++T+N+L   L +  R   + E+ +  L + G+ PD  TFN LI   C 
Sbjct: 317 EEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCN 376

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK-----GSD 180
              +DE  K F+ M   K +PD  TY+ ++   C+ G    A  +   ++KK        
Sbjct: 377 VGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDG 436

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRF 12
             P I  Y  +   +C   +  +A  VF +++ RG + +   Y  LI G C+   F
Sbjct: 437 CTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ-DPFAYELLIRGHCKEGTF 491



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 67/312 (21%), Positives = 121/312 (38%), Gaps = 44/312 (14%)
 Frame = -3

Query: 812  ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 633
            +S TT++      +   +AL  F      G   T  +Y  ++Q LC  + F+  +  L  
Sbjct: 294  VSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEG 353

Query: 632  IPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFK 453
                 +G +  D   FN LI      G   E++KVF+ M  + V P + T++ L     +
Sbjct: 354  T--LGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQ 411

Query: 452  RGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEM---- 303
            +G      +L+D+L+K        G  P +  +N +   FC      +  K F+++    
Sbjct: 412  KGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRG 471

Query: 302  --DSFKCE----------------------------PDVITYNTIVDGLCRAGKVKIAHN 213
              D F  E                            P+++ Y ++++GL +    K+A++
Sbjct: 472  TQDPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYD 531

Query: 212  VMKGMLKKGSDSMPNIVTY----TTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNT 45
             ++ MLK  S  +P    Y    T LI+  C  +       + D  + + +  +  T   
Sbjct: 532  TLEKMLK--SSHLPRSSIYHQILTELIKKNCASECASLVTLMLDNKVRQNINLSTDTVKI 589

Query: 44   LIGGLCEARRFE 9
            L       R FE
Sbjct: 590  LFQTGLRERAFE 601


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  439 bits (1130), Expect = e-121
 Identities = 207/299 (69%), Positives = 256/299 (85%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           +AR +A +INT+ WS+ LE+S++ L QP +S TTVLHTLR IK P KAL FF W  + GF
Sbjct: 55  KARNIASIINTNPWSSHLESSLSSLTQPSLSHTTVLHTLRFIKIPFKALYFFNWTQKMGF 114

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            HT QSYLLMLQLL + R+ N+ARNFLLSIP++SNG V L D++FN LI+++G+AGLF+E
Sbjct: 115 QHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQSYGKAGLFQE 174

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           SLKVF+ MKS+G+SPS VTFNSLFSIL KRGRTG+V+EL+DE+LKT+G KPD+YTFNILI
Sbjct: 175 SLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILI 234

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFCMNSMVD+GF+FFKEM+  +CEPDVITYNTIVDGLCRAGKV+IAHNV+KGM+K+G  
Sbjct: 235 RGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQ 294

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+V+YTTL+RGYC KQE++ AL VF+EMI  GLKP  ITYNTL+ GLCEA+RF++I
Sbjct: 295 LSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRI 353



 Score =  109 bits (273), Expect = 1e-21
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
 Frame = -3

Query: 587 FNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELL 408
           FN LIR F    +  +  + F+ M+     P  +T+N++   L + G+  I   +   ++
Sbjct: 230 FNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMV 289

Query: 407 KT-YGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGK 231
           K  + + P++ ++  L+RG+C    V+     F+EM     +P  ITYNT+V GLC A +
Sbjct: 290 KRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKR 349

Query: 230 VKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITY 51
                 +++G L  G   +P+  T+ TLI  +C    +DEA+ VF+ M+   +KP+  TY
Sbjct: 350 FDRIKEILEGTLGSGG-LIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATY 408

Query: 50  NTLIGGLCEARRFEK 6
           + LI   C+   F++
Sbjct: 409 SILIRSFCQKGYFDR 423



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N L  + K+ +  +  +   +  L+R + E    + +L VF
Sbjct: 264 TYNTIVDGLCRAGKVEIAHNVLKGMVKRGH-QLSPNVVSYTTLVRGYCEKQEVERALDVF 322

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M   G+ P+++T+N+L   L +  R   + E+ +  L + G+ PD  TFN LI   C 
Sbjct: 323 EEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITFHCN 382

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK-----GSD 180
              +DE  K F+ M   K +PD  TY+ ++   C+ G    A  +   ++KK        
Sbjct: 383 VGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDG 442

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRF 12
             P I  Y  +   +C   +  +A  VF +++ RG + +   Y  LI G C+   F
Sbjct: 443 CTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGTQ-DPFAYELLIMGHCKEGTF 497



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 67/312 (21%), Positives = 122/312 (39%), Gaps = 44/312 (14%)
 Frame = -3

Query: 812  ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 633
            +S TT++      +   +AL  F      G   T  +Y  ++Q LC  + F+  +  L  
Sbjct: 300  VSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEG 359

Query: 632  IPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFK 453
                 +G +  D   FN LI      G   E++KVF+ M  + V P + T++ L     +
Sbjct: 360  T--LGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQ 417

Query: 452  RGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEM---- 303
            +G      +L+D+L+K        G  P +  +N +   FC      +  K F+++    
Sbjct: 418  KGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRG 477

Query: 302  --DSFKCE----------------------------PDVITYNTIVDGLCRAGKVKIAHN 213
              D F  E                            P+++ Y ++++GL +    K+A++
Sbjct: 478  TQDPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYESLIEGLLQKNDPKVAYD 537

Query: 212  VMKGMLKKGSDSMPNIVTY----TTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNT 45
             ++ MLK  S  +P   T+    T LI+  C  +       + D  + + +  +  T   
Sbjct: 538  TLEKMLK--SSHLPRSSTFHQILTELIKKNCASECASLVTLMLDNKVRQNINLSTDTVRI 595

Query: 44   LIGGLCEARRFE 9
            L       R FE
Sbjct: 596  LFQAGLRERAFE 607


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  414 bits (1065), Expect = e-113
 Identities = 202/299 (67%), Positives = 245/299 (81%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           R++ MARLINT  WS +L++S+A+LA P +S+TTVL TL+LI+TP+KAL FF W    GF
Sbjct: 65  RSQAMARLINTEPWSHELQSSLAELA-PSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGF 123

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            H  QSY LM+++L   RN N ARNF+ SI KKS GAV+L D+ FN LIR++G AGLF+E
Sbjct: 124 THNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQE 183

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+KVF+TMK IGVSPS VTFNSL SI+ KRGRT +  +L+DE+L TYGV PD YTFNILI
Sbjct: 184 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 243

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFCMNSMVDEGF FFKEM  FKC+PDV+TYNT+VDGLCRAGKVKIAHNV+KGM+KK  +
Sbjct: 244 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN 303

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+VTYTTLIRGYC KQ++ EAL +  EM++RGLKPN ITYNTLI GLCEA++ +KI
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362



 Score =  114 bits (286), Expect = 4e-23
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 1/199 (0%)
 Frame = -3

Query: 599 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY 420
           D   FN LIR F    +  E    F+ M      P  VT+N+L   L + G+  I   + 
Sbjct: 235 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294

Query: 419 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 243
             ++K +  + P++ T+  LIRG+CM   + E      EM S   +P+ ITYNT++ GLC
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354

Query: 242 RAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
            A K+     +++GM+  G   +P+  T  TLI+ +C   +++EA  VF++M    ++P+
Sbjct: 355 EAQKLDKIKEILEGMVGDGG-FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413

Query: 62  DITYNTLIGGLCEARRFEK 6
             TY+ L+  LC+   F +
Sbjct: 414 SATYSVLVRSLCQRGDFRR 432



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N +  + KKS   +  +   +  LIR +       E+L + 
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN-LSPNVVTYTTLIRGYCMKQDMAEALSLL 331

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
             M S G+ P+ +T+N+L   L +  +   + E+ + ++   G  PD  T N LI+  C 
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCT 391

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
              ++E F  F++M   + +PD  TY+ +V  LC+ G  + A         K +L     
Sbjct: 392 MGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVG 451

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLC 27
             P +  Y  +    C   +  +A  VF +++ RG + +  +Y TLI G C
Sbjct: 452 CKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHC 501



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 70/316 (22%), Positives = 130/316 (41%), Gaps = 44/316 (13%)
 Frame = -3

Query: 830  DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 651
            +L+   ++ TT++    + +  ++AL         G      +Y  ++Q LC  +  +  
Sbjct: 303  NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362

Query: 650  RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 471
            +  L  +    +G    D    N LI+A    G  +E+  VF+ M  + V P + T++ L
Sbjct: 363  KEILEGMV--GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 420

Query: 470  FSILFKRGRTGIVFELYDEL------LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 309
               L +RG      E +DEL      L   G KP +  +N +    C N    +  + F+
Sbjct: 421  VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 480

Query: 308  EM--------DSFK------CE--------------------PDVITYNTIVDGLCRAGK 231
            ++         S+K      C                     PD  TY  ++DGL + G 
Sbjct: 481  QLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGD 540

Query: 230  VKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN-DIT 54
              +AH  ++ MLK  S  +P    + +++     K    E+  +   M+ R ++ N D++
Sbjct: 541  PVLAHKSLEKMLK--SSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLS 598

Query: 53   YNT---LIGGLCEARR 15
             +T   L+  LC++R+
Sbjct: 599  THTMEELVSFLCQSRK 614


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  414 bits (1065), Expect = e-113
 Identities = 202/299 (67%), Positives = 245/299 (81%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           R++ MARLINT  WS +L++S+A+LA P +S+TTVL TL+LI+TP+KAL FF W    GF
Sbjct: 65  RSQAMARLINTEPWSHELQSSLAELA-PSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGF 123

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            H  QSY LM+++L   RN N ARNF+ SI KKS GAV+L D+ FN LIR++G AGLF+E
Sbjct: 124 THNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQE 183

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+KVF+TMK IGVSPS VTFNSL SI+ KRGRT +  +L+DE+L TYGV PD YTFNILI
Sbjct: 184 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 243

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFCMNSMVDEGF FFKEM  FKC+PDV+TYNT+VDGLCRAGKVKIAHNV+KGM+KK  +
Sbjct: 244 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN 303

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+VTYTTLIRGYC KQ++ EAL +  EM++RGLKPN ITYNTLI GLCEA++ +KI
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362



 Score =  114 bits (286), Expect = 4e-23
 Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 1/199 (0%)
 Frame = -3

Query: 599 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY 420
           D   FN LIR F    +  E    F+ M      P  VT+N+L   L + G+  I   + 
Sbjct: 235 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294

Query: 419 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 243
             ++K +  + P++ T+  LIRG+CM   + E      EM S   +P+ ITYNT++ GLC
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354

Query: 242 RAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
            A K+     +++GM+  G   +P+  T  TLI+ +C   +++EA  VF++M    ++P+
Sbjct: 355 EAQKLDKIKEILEGMVGDGG-FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413

Query: 62  DITYNTLIGGLCEARRFEK 6
             TY+ L+  LC+   F +
Sbjct: 414 SATYSVLVRSLCQRGDFRR 432



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N +  + KKS   +  +   +  LIR +       E+L + 
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN-LSPNVVTYTTLIRGYCMKQDMAEALSLL 331

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
             M S G+ P+ +T+N+L   L +  +   + E+ + ++   G  PD  T N LI+  C 
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCT 391

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
              ++E F  F++M   + +PD  TY+ +V  LC+ G  + A         K +L     
Sbjct: 392 MGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVG 451

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLC 27
             P +  Y  +    C   +  +A  VF +++ RG + +  +Y TLI G C
Sbjct: 452 CKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHC 501



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 41/304 (13%)
 Frame = -3

Query: 830  DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 651
            +L+   ++ TT++    + +  ++AL         G      +Y  ++Q LC  +  +  
Sbjct: 303  NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362

Query: 650  RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 471
            +  L  +    +G    D    N LI+A    G  +E+  VF+ M  + V P + T++ L
Sbjct: 363  KEILEGMV--GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 420

Query: 470  FSILFKRGRTGIVFELYDEL------LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 309
               L +RG      E +DEL      L   G KP +  +N +    C N    +  + F+
Sbjct: 421  VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 480

Query: 308  EM--------DSFK------CE--------------------PDVITYNTIVDGLCRAGK 231
            ++         S+K      C                     PD  TY  ++DGL + G 
Sbjct: 481  QLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGD 540

Query: 230  VKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN-DIT 54
              +AH  ++ MLK  S  +P    + +++     K    E+  +   M+ R ++ N D++
Sbjct: 541  PVLAHKSLEKMLK--SSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLS 598

Query: 53   YNTL 42
             +T+
Sbjct: 599  THTV 602


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  413 bits (1062), Expect = e-113
 Identities = 197/299 (65%), Positives = 246/299 (82%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           +A++MARLIN+  WS +LE+S++ L+ P IS+TTV   LRLIKTPSKALQFF WA   GF
Sbjct: 56  KAKSMARLINSKPWSTELESSLSSLS-PSISKTTVFEVLRLIKTPSKALQFFNWAPELGF 114

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            H  QSY LML++L   RN N ARNFL SI ++SNG V+L+D+ FN LIR++G+AGLF+E
Sbjct: 115 THNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQE 174

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S++VF +MKS+GVSPS VTFNSL  IL KRGRT +   ++DE+L TYGV PD YTFNILI
Sbjct: 175 SVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILI 234

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFC NSMVDEGF+FFKEM  FKC+PD++TYNT+VDGLCRAGKV IAHNV+ GM+KK ++
Sbjct: 235 RGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTN 294

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             P++VTYTTL+RGYC K EIDEAL VF+EM+++GLKPN+ITYNTLI GLCE ++ +KI
Sbjct: 295 LNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKI 353



 Score =  128 bits (321), Expect = 4e-27
 Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 1/231 (0%)
 Frame = -3

Query: 695 LMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM 516
           L+L LL  GR  N A++    +   S   V  D   FN LIR F +  +  E  + F+ M
Sbjct: 197 LLLILLKRGRT-NMAQSVFDEM--LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEM 253

Query: 515 KSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLK-TYGVKPDLYTFNILIRGFCMNS 339
                 P  VT+N+L   L + G+  I   + + ++K +  + PD+ T+  L+RG+CM  
Sbjct: 254 SRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKH 313

Query: 338 MVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVT 159
            +DE    F+EM S   +P+ ITYNT++ GLC   K+     + +G L  G   +P+  T
Sbjct: 314 EIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGAL-GGGGFIPDTCT 372

Query: 158 YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEK 6
             TL+  +C    +++AL VF++M+   ++P+  TY+ LI  LC+   FE+
Sbjct: 373 LNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFER 423



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC     N A N +  + KKS   +  D   +  L+R +       E+L VF
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTN-LNPDVVTYTTLVRGYCMKHEIDEALVVF 322

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M S G+ P+ +T+N+L   L +  +   + ++++  L   G  PD  T N L+   C 
Sbjct: 323 EEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCN 382

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
              +++  + F++M      PD  TY+ ++  LC+ G  + A  +      K +L +   
Sbjct: 383 AGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDG 442

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
             P +  Y ++    C   +  +A  VF +++ RG + + +++  LI G C    FE
Sbjct: 443 CTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFE 498



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
 Frame = -3

Query: 812  ISQTTVLHTLRLIKTPSKALQFFYWAYRAG-FVHTPQSYLLMLQLLCAGRNFNTARNFLL 636
            I+  T++  L  ++   K  Q F  A   G F+    +   ++   C   N N A   L 
Sbjct: 335  ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDA---LE 391

Query: 635  SIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM-------KSIGVSPSAVTFN 477
               K     V  D   ++ LIR   + G F+ + ++F  +       +  G +P    + 
Sbjct: 392  VFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYK 451

Query: 476  SLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDS 297
            S+F  L + G+T     ++ +L+K     P   +F ILI+G C     + G++    M  
Sbjct: 452  SMFEFLCRNGKTAKAERVFRQLMKRGTQDP--LSFKILIKGHCREGTFEAGYELLVLMLR 509

Query: 296  FKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLI 144
                PD+ TY +++DGL + G+  +A+  ++ M+K  S  +P   T+ +++
Sbjct: 510  RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIK--SSHVPETSTFHSIL 558


>gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 724

 Score =  409 bits (1052), Expect = e-112
 Identities = 200/299 (66%), Positives = 247/299 (82%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           RA++MAR+IN++ WS++LE+S++ L+ P +S+TTVL TLRLIK PSKALQFF W  + GF
Sbjct: 60  RAKSMARVINSTPWSSELESSLSSLS-PSLSKTTVLQTLRLIKAPSKALQFFDWVQKMGF 118

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            H  QS+ L+L++L   RN N ARN LLSI K+SNG+V+L+D+ FN LIR++G+AGLF+E
Sbjct: 119 PHNAQSFFLILEILGKERNLNAARNLLLSIEKRSNGSVKLEDQFFNSLIRSYGKAGLFQE 178

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+KVF+TMK IGVSPS V+FN+L  IL KRGRT +   ++DE+L TYGV PD+YTFNILI
Sbjct: 179 SIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILI 238

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFCMNSMVDEGF+FFKEM+ FKC+PDV+TYNTIVDGLCRAGKV IA NV++GM KK  D
Sbjct: 239 RGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLD 298

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+VTYTTL+RGYC KQEIDEAL VF EMI+R L+PN ITYNTLI GL E   +EKI
Sbjct: 299 LNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKI 357



 Score =  122 bits (305), Expect = 3e-25
 Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
 Frame = -3

Query: 695 LMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM 516
           L++ LL  GR  N A++    +   S   V  D   FN LIR F    +  E  + F+ M
Sbjct: 201 LLMILLKRGRT-NMAKSVFDEM--LSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEM 257

Query: 515 KSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLK-TYGVKPDLYTFNILIRGFCMNS 339
           +     P  VT+N++   L + G+ GI   +   + K +  + P++ T+  L+RG+CM  
Sbjct: 258 ERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVRGYCMKQ 317

Query: 338 MVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVT 159
            +DE    FKEM S +  P+ ITYNT++ GL    + +    +++GM + G   +P+  T
Sbjct: 318 EIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGR-FVPDTCT 376

Query: 158 YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEK 6
             TLI  +C  + +DEAL VF  M    + P+  TY+ +I  LC+   FEK
Sbjct: 377 LNTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEK 427



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 7/239 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 531
           +Y  ++  LC       ARN +  + KKS   ++L+     +  L+R +       E+L 
Sbjct: 268 TYNTIVDGLCRAGKVGIARNVVRGMSKKS---LDLNPNVVTYTTLVRGYCMKQEIDEALV 324

Query: 530 VFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 351
           VF+ M S  + P+ +T+N+L   L +      + E+ + + +     PD  T N LI   
Sbjct: 325 VFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAH 384

Query: 350 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKG 186
           C    +DE    FK M      PD  TY+ I+  LC+ G  + A         K +L   
Sbjct: 385 CNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSD 444

Query: 185 SDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
               P +  Y  +    CG  +  +A  VF +++ RG + +   Y TLI G C    F+
Sbjct: 445 VGCTPLVAAYNPMFEYLCGNGKTKKAEIVFRQLMKRG-RQDPPAYKTLILGHCREGTFK 502


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  404 bits (1038), Expect = e-110
 Identities = 196/299 (65%), Positives = 237/299 (79%)
 Frame = -3

Query: 899  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
            RA+ M+RLINT+ WS  LE+S++ L   P+S+TTVL TLRLI +PSKA QFF W  + GF
Sbjct: 107  RAKEMSRLINTNPWSTDLESSLSSLFPFPLSKTTVLQTLRLITSPSKAFQFFKWVPQMGF 166

Query: 719  VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
             H  QS  +ML++L   RN N ARNFL SI KKSNG+V+L+D+ FN LIR++G AGLF+E
Sbjct: 167  SHNDQSCFMMLEILGRSRNLNAARNFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQE 226

Query: 539  SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
            S+K+F TMK + ++PS VTFNSL  +L KRGRT +   ++DE+L TYGV+PD +TFN+LI
Sbjct: 227  SVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLI 286

Query: 359  RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
            RGFCMNSMVDEGF FFKEM  FKCEPDV+TYNT+VDGLCRAGKV IA NV+KGM KK  D
Sbjct: 287  RGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVD 346

Query: 179  SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
              PNIVTYTTLI+GYCGKQEIDEAL V  EM  RGLKPN ITYNTLI GLCEA++ + +
Sbjct: 347  LNPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDV 405



 Score =  121 bits (304), Expect = 4e-25
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 1/225 (0%)
 Frame = -3

Query: 695 LMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM 516
           L+L LL  GR  N ARN    +       VE D   FN LIR F    +  E    F+ M
Sbjct: 249 LLLVLLKRGRT-NMARNVFDEM--LGTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEM 305

Query: 515 KSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLK-TYGVKPDLYTFNILIRGFCMNS 339
                 P  VT+N+L   L + G+  I   +   + K +  + P++ T+  LI+G+C   
Sbjct: 306 SRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQ 365

Query: 338 MVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVT 159
            +DE     KEM     +P+ ITYNT++ GLC A K+     ++ G +++G + +PN  T
Sbjct: 366 EIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRG-EFVPNTCT 424

Query: 158 YTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCE 24
           + TLI  +C    +DEAL VF++M+   +  +  TY+ LI  LC+
Sbjct: 425 FNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQ 469



 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 44/271 (16%)
 Frame = -3

Query: 704  SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 531
            +Y  ++  LC     + ARN +  + KKS   V+L+     +  LI+ +       E+L 
Sbjct: 316  TYNTLVDGLCRAGKVDIARNVVKGMSKKS---VDLNPNIVTYTTLIKGYCGKQEIDEALL 372

Query: 530  VFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 351
            V + M   G+ P+ +T+N+L   L +  +   V ++ D  ++     P+  TFN LI   
Sbjct: 373  VLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTH 432

Query: 350  CMNSMVDEGFKFFKEMDSFK---------------------------------------- 291
            C    +DE  K F++M   +                                        
Sbjct: 433  CQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSD 492

Query: 290  --CEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEI 117
              C P V  YN + + LCR GK K A  V + ++K+G+   P   +Y TLI G+C +   
Sbjct: 493  DGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQDPP---SYKTLIMGHCREGTF 549

Query: 116  DEALGVFDEMIARGLKPNDITYNTLIGGLCE 24
            +    +   M+ R   P+   Y +LI GL +
Sbjct: 550  EAGYELLVLMLRRDFVPDAEIYESLITGLLQ 580


>gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  403 bits (1035), Expect = e-110
 Identities = 194/298 (65%), Positives = 238/298 (79%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A+ MARL+NT+ WS++LE+S++ ++   +S+TTV  TL LIKTP KALQFF W    GF 
Sbjct: 49  AKDMARLVNTNTWSSELESSLSTISSS-LSKTTVHQTLHLIKTPHKALQFFKWVEVMGFS 107

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           H  QSY LML++L   RN N ARN L SI K+SNGAV+L+D+ FN LIR +G AGLF+ES
Sbjct: 108 HNDQSYFLMLEILGRARNLNAARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQES 167

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           +K+F TMKS+GVSPS V+FNSL SIL K+GRT +   +YDE+L  YGV PD YTFNILIR
Sbjct: 168 IKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIR 227

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFCMNSMVDEG++FFK+M  F+C+PDVITYNT+VDGLCRAGKV+IAHNV+ GM K+  D 
Sbjct: 228 GFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDL 287

Query: 176 MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
            PN+VTYTTLIRGYC KQEID+AL + +EM  RGLKPN  TYNTLI GLCEA++ +KI
Sbjct: 288 TPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKI 345



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N +  + K+S G +  +   +  LIR +       ++L + 
Sbjct: 256 TYNTLVDGLCRAGKVEIAHNVVNGMSKRS-GDLTPNVVTYTTLIRGYCVKQEIDKALSIL 314

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M + G+ P+  T+N+L   L +  +   + E+++  +      PD  TFN L+   C 
Sbjct: 315 EEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCN 374

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
              +DE  K F +M   K  PD  TY+ ++  LC+ G    A  +      K +L +   
Sbjct: 375 AGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILLRDDG 434

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
             P + +Y  +        +  +A  VF +++ RG + + ++Y TLI G C+   +E
Sbjct: 435 CKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQ-DPLSYKTLIMGNCKEGTYE 490


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
           gi|550323558|gb|ERP53036.1| hypothetical protein
           POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  395 bits (1015), Expect = e-107
 Identities = 189/298 (63%), Positives = 235/298 (78%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A++MARLIN+  WS +LE+S+  L+ P IS+TT    LR I +P KA +FF WA R GF 
Sbjct: 62  AKSMARLINSKPWSTELESSLFSLS-PSISKTTFFQVLRFIASPPKAFEFFNWASRNGFA 120

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           H  +SY +ML +L    N N ARNFL SI ++SNG+V+++D+  N L+R++G AGLF E+
Sbjct: 121 HDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEA 180

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           +K+F  MKS GVSPS +TFNSL  IL KRGRT +   ++DE+  TYGV PD YTFNILIR
Sbjct: 181 IKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIR 240

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFC NSMVDEGF+FFKEM  F CEPDV+TYNT+VDGLCRAGKV+IAHNV+KGM+KK  D 
Sbjct: 241 GFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDL 300

Query: 176 MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
            P++VTYTTL+RGYC KQEIDEAL VF+EM++RGLKPNDITYNTLI GLCE ++F+KI
Sbjct: 301 SPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKI 358



 Score =  120 bits (300), Expect = 1e-24
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
 Frame = -3

Query: 599 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY 420
           D   FN LIR F +  +  E  + F+ M      P  VT+N+L   L + G+  I   + 
Sbjct: 231 DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVV 290

Query: 419 DELLKTY-GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 243
             ++K    + PD+ T+  L+RG+CM   +DE    F+EM S   +P+ ITYNT++ GLC
Sbjct: 291 KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLC 350

Query: 242 RAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
              K      ++ G +  G   +P+  TY TL+   C     DEAL +F +M    ++P+
Sbjct: 351 EVQKFDKIKEILGGAVG-GRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPD 409

Query: 62  DITYNTLIGGLCEARRFEK 6
             TY+ LI  LC+   FE+
Sbjct: 410 SATYSVLIRNLCQRGDFER 428



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N +  + KK    +  D   +  L+R +       E+L VF
Sbjct: 269 TYNTLVDGLCRAGKVRIAHNVVKGMVKKMKD-LSPDVVTYTTLVRGYCMKQEIDEALVVF 327

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M S G+ P+ +T+N+L   L +  +   + E+    +   G  PD  T+N L+   C 
Sbjct: 328 EEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCD 387

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
               DE  K FK+M   K +PD  TY+ ++  LC+ G  + A  +      + +L +   
Sbjct: 388 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDG 447

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
             P +  Y  +    C   +  +A  VF +++ +G + +  +Y TLI G C+   FE
Sbjct: 448 CTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFE 503



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 11/250 (4%)
 Frame = -3

Query: 725  GFVHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLF 546
            GFV    +Y  ++   C   NF+ A   L    K     V+ D   ++ LIR   + G F
Sbjct: 370  GFVPDTCTYNTLMNAQCDAGNFDEA---LKMFKKMKELKVQPDSATYSVLIRNLCQRGDF 426

Query: 545  KESLKVFQTM-------KSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKP 387
            + + ++F  +       +  G +P    +N +F  L K G+T     ++ +L+K     P
Sbjct: 427  ERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDP 486

Query: 386  DLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 207
              Y    LI G C     + G+K    M      PD  TY  +++G  + G+  +A+  +
Sbjct: 487  PSY--KTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTL 544

Query: 206  KGMLKKGSDSMPNIVTY----TTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 39
            + MLK  S  +P    +    + L++    ++     + + D  I + +  +  T   L 
Sbjct: 545  ERMLK--SSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLF 602

Query: 38   GGLCEARRFE 9
            G     + F+
Sbjct: 603  GSGLRIKAFQ 612


>ref|XP_002326829.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  392 bits (1008), Expect = e-107
 Identities = 188/295 (63%), Positives = 232/295 (78%)
 Frame = -3

Query: 887 MARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTP 708
           MARLIN+  WS +LE+S+  L+ P IS+TT    LR I +P KA +FF WA R GF H  
Sbjct: 1   MARLINSKPWSTELESSLFSLS-PSISKTTFFQVLRFIASPPKAFEFFNWASRNGFAHDS 59

Query: 707 QSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKV 528
           +SY +ML +L    N N ARNFL SI ++SNG+V+++D+  N L+R++G AGLF E++K+
Sbjct: 60  RSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKL 119

Query: 527 FQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFC 348
           F  MKS GVSPS +TFNSL  IL KRGRT +   ++DE+  TYGV PD YTFNILIRGFC
Sbjct: 120 FSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFC 179

Query: 347 MNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPN 168
            NSMVDEGF+FFKEM  F CEPDV+TYNT+VDGLCRAGKV+IAHNV+KGM+KK  D  P+
Sbjct: 180 KNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPD 239

Query: 167 IVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
           +VTYTTL+RGYC KQEIDEAL VF+EM++RGLKPNDITYNTLI GLCE ++F+KI
Sbjct: 240 VVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKI 294



 Score =  120 bits (300), Expect = 1e-24
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
 Frame = -3

Query: 599 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY 420
           D   FN LIR F +  +  E  + F+ M      P  VT+N+L   L + G+  I   + 
Sbjct: 167 DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVV 226

Query: 419 DELLKTY-GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 243
             ++K    + PD+ T+  L+RG+CM   +DE    F+EM S   +P+ ITYNT++ GLC
Sbjct: 227 KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLC 286

Query: 242 RAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
              K      ++ G +  G   +P+  TY TL+   C     DEAL +F +M    ++P+
Sbjct: 287 EVQKFDKIKEILGGAVG-GRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPD 345

Query: 62  DITYNTLIGGLCEARRFEK 6
             TY+ LI  LC+   FE+
Sbjct: 346 SATYSVLIRNLCQRGDFER 364



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N +  + KK    +  D   +  L+R +       E+L VF
Sbjct: 205 TYNTLVDGLCRAGKVRIAHNVVKGMVKKMKD-LSPDVVTYTTLVRGYCMKQEIDEALVVF 263

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M S G+ P+ +T+N+L   L +  +   + E+    +   G  PD  T+N L+   C 
Sbjct: 264 EEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCD 323

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
               DE  K FK+M   K +PD  TY+ ++  LC+ G  + A  +      + +L +   
Sbjct: 324 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDG 383

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
             P +  Y  +    C   +  +A  VF +++ +G + +  +Y TLI G C+   FE
Sbjct: 384 CTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFE 439



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 11/250 (4%)
 Frame = -3

Query: 725  GFVHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLF 546
            GFV    +Y  ++   C   NF+ A   L    K     V+ D   ++ LIR   + G F
Sbjct: 306  GFVPDTCTYNTLMNAQCDAGNFDEA---LKMFKKMKELKVQPDSATYSVLIRNLCQRGDF 362

Query: 545  KESLKVFQTM-------KSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKP 387
            + + ++F  +       +  G +P    +N +F  L K G+T     ++ +L+K     P
Sbjct: 363  ERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDP 422

Query: 386  DLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 207
              Y    LI G C     + G+K    M      PD  TY  +++G  + G+  +A+  +
Sbjct: 423  PSY--KTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTL 480

Query: 206  KGMLKKGSDSMPNIVTY----TTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLI 39
            + MLK  S  +P    +    + L++    ++     + + D  I + +  +  T   L 
Sbjct: 481  ERMLK--SSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLF 538

Query: 38   GGLCEARRFE 9
            G     + F+
Sbjct: 539  GSGLRIKAFQ 548


>ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335180|gb|EFH65597.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 712

 Score =  391 bits (1004), Expect = e-106
 Identities = 187/299 (62%), Positives = 235/299 (78%), Gaps = 1/299 (0%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADL-AQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           AR++AR +N++ WS +LE+S++ L    P+S+TTVL TLRLIK P+  L+FF W Y  GF
Sbjct: 40  ARSLARAVNSNPWSDELESSLSSLHPSEPLSRTTVLQTLRLIKVPADGLRFFDWVYNKGF 99

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            H  QS+ LML+ L   RN N ARNFL SI K+SNG V+L D++FN LIR++G AGLF+E
Sbjct: 100 SHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQE 159

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+ +FQTMK +G+SPS +TFNSL SIL KRGRTG+  +++DE+ +TYGV PD YTFN LI
Sbjct: 160 SVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLI 219

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
            GFC NSMVD+ F  FKEM+ + C PDV+TYNTI+DGLCRAGKVKIAHN++ GMLKK + 
Sbjct: 220 SGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATA 279

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PNIV+YTTL+RGYC KQEIDEAL VF EM+ RGLKPN +TYNTLI GL EA R+++I
Sbjct: 280 VHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEI 338



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N L  + KK+  AV  +   +  L+R +       E+L VF
Sbjct: 249 TYNTIIDGLCRAGKVKIAHNLLNGMLKKAT-AVHPNIVSYTTLLRGYCMKQEIDEALLVF 307

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIV--FELYDELLKTYGVKPDLYTFNILIRGF 351
             M + G+ P+AVT+N+L   L +  R   +  F +  +   T+   PD  TFNILI+  
Sbjct: 308 HEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFS--PDACTFNILIKAH 365

Query: 350 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK-----G 186
           C    +D   K F+EM + K  PD  +Y+ ++  LC   +   A  +   + +K      
Sbjct: 366 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGK 425

Query: 185 SDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
           ++  P    Y  +    C   +  +A  VF +++ RG + +  +Y TLI GLC   +F+
Sbjct: 426 NECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFK 483



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 59/290 (20%), Positives = 120/290 (41%), Gaps = 40/290 (13%)
 Frame = -3

Query: 812  ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 633
            +S TT+L    + +   +AL  F+     G      +Y  +++ L     ++  + FL+ 
Sbjct: 285  VSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIG 344

Query: 632  IPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFK 453
                +      D   FN LI+A  +AG    ++KVFQ M ++ + P + +++ L   L  
Sbjct: 345  --GDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCL 402

Query: 452  RGRTGIVFELYDELLKTYGV------KPDLYTFNILIRGFCMNSMVDEGFKFFKEM---- 303
            R        L++EL +   +      KP    +N++    C N    +  K F+++    
Sbjct: 403  RNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG 462

Query: 302  -----------------DSFKCE-------------PDVITYNTIVDGLCRAGKVKIAHN 213
                               FK               PD  TY  ++DGL + G+  +AH+
Sbjct: 463  AQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHD 522

Query: 212  VMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
             ++ ML+  S  +P   T+ +++     ++  +++ G+   M+ + ++ N
Sbjct: 523  TLQRMLR--SSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQN 570


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
           gi|332189251|gb|AEE27372.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  390 bits (1002), Expect = e-106
 Identities = 186/299 (62%), Positives = 237/299 (79%), Gaps = 1/299 (0%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADL-AQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           AR++AR +N++ WS +LE+S++ L     IS+TTVL TLRLIK P+  L+FF W    GF
Sbjct: 37  ARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGF 96

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            H  QS+ LML+ L   RN N ARNFL SI ++SNG V+L D++FN LIR++G AGLF+E
Sbjct: 97  SHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQE 156

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+K+FQTMK +G+SPS +TFNSL SIL KRGRTG+  +L+DE+ +TYGV PD YTFN LI
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
            GFC NSMVDE F+ FK+M+ + C PDV+TYNTI+DGLCRAGKVKIAHNV+ GMLKK +D
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+V+YTTL+RGYC KQEIDEA+ VF +M++RGLKPN +TYNTLI GL EA R+++I
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI 335



 Score =  111 bits (277), Expect = 5e-22
 Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 5/203 (2%)
 Frame = -3

Query: 599 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY 420
           D   FN LI  F +  +  E+ ++F+ M+    +P  VT+N++   L + G+  I   + 
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267

Query: 419 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 243
             +LK    V P++ ++  L+RG+CM   +DE    F +M S   +P+ +TYNT++ GL 
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327

Query: 242 RAGKVKIAHNVMKGMLKKGSDSM----PNIVTYTTLIRGYCGKQEIDEALGVFDEMIARG 75
            A +    ++ +K +L  G+D+     P+  T+  LI+ +C    +D A+ VF EM+   
Sbjct: 328 EAHR----YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383

Query: 74  LKPNDITYNTLIGGLCEARRFEK 6
           L P+  +Y+ LI  LC    F++
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDR 406



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 8/240 (3%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N L  + KK+   V  +   +  L+R +       E++ VF
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATD-VHPNVVSYTTLVRGYCMKQEIDEAVLVF 304

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY---DELLKTYGVKPDLYTFNILIRG 354
             M S G+ P+AVT+N+L   L +  R   + ++    ++   T+   PD  TFNILI+ 
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA--PDACTFNILIKA 362

Query: 353 FCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK----G 186
            C    +D   K F+EM + K  PD  +Y+ ++  LC   +   A  +   + +K    G
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422

Query: 185 SDS-MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
            D   P    Y  +    C   +  +A  VF +++ RG++ +  +Y TLI G C   +F+
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFK 481


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  389 bits (1000), Expect = e-106
 Identities = 191/303 (63%), Positives = 240/303 (79%), Gaps = 5/303 (1%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A+ MA LIN++ WS  L++S++ L+ P IS TTV  TLR IKTPS+A++FF W    GF 
Sbjct: 51  AQAMASLINSTPWSPHLQSSLSSLS-PSISTTTVSQTLRRIKTPSQAIKFFNWVESLGFS 109

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           HT  SY  +L+LL   RN N ARNFL SI K+SNG V+L+DK FN LIR++G AGLF+E+
Sbjct: 110 HTSHSYFTILELLGRNRNLNAARNFLFSIEKRSNGKVKLEDKFFNSLIRSYGAAGLFQEA 169

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           + VF+TMKS+G+S S  +FNSLFS+L KRGRT +V  +YDE+L  YGV+PD +TFNILIR
Sbjct: 170 VNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEMLGMYGVEPDTHTFNILIR 229

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFCM+SMVDEGF FFKEM+ FKCEPDV+TYNT+VDGLCR GKV+IA NV+KGM+ K S+ 
Sbjct: 230 GFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMMSKSSEG 289

Query: 176 -----MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRF 12
                 PN+VTYTTLIRGYC +QE+DEALGV +EM ++G+KPN+ITYNTL  GLCEA+R 
Sbjct: 290 ELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRL 349

Query: 11  EKI 3
           +KI
Sbjct: 350 DKI 352



 Score =  110 bits (276), Expect = 6e-22
 Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 6/207 (2%)
 Frame = -3

Query: 608 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVF 429
           VE D   FN LIR F  + +  E    F+ M+     P  VT+N+L   L + G+  I  
Sbjct: 217 VEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIAR 276

Query: 428 ELYDELLKTYG------VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITY 267
            +   ++          + P++ T+  LIRG+C+   VDE     +EM S   +P+ ITY
Sbjct: 277 NVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITY 336

Query: 266 NTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEM 87
           NT+  GLC A ++     +++G ++ G    P+  T+ TL+  +C    ++EAL VF  M
Sbjct: 337 NTLFKGLCEAKRLDKIKEILEGAMR-GEGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMM 395

Query: 86  IARGLKPNDITYNTLIGGLCEARRFEK 6
               + P+  TY+ LI   CE R + K
Sbjct: 396 SELKVPPDSATYSVLIRSWCERRDYSK 422



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKH-----FNCLIRAFGEAGLFKE 540
           +Y  ++  LC       ARN +  +  KS+   EL+  +     +  LIR +       E
Sbjct: 258 TYNTLVDGLCRDGKVEIARNVVKGMMSKSSEG-ELNQLNPNVVTYTTLIRGYCVRQEVDE 316

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           +L V + M S G+ P+ +T+N+LF  L +  R   + E+ +  ++  G  PD  TFN L+
Sbjct: 317 ALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLM 376

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK--- 189
              C+   ++E  K F+ M   K  PD  TY+ ++   C       A  +   + KK   
Sbjct: 377 HSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQIL 436

Query: 188 --GSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARR 15
                  P + +Y  +    C      +A  VF +++ RG + +  ++ TLI G C    
Sbjct: 437 LSDCGCTPIVASYKPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSFKTLIMGHCREGT 495

Query: 14  FE 9
           +E
Sbjct: 496 YE 497



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 8/258 (3%)
 Frame = -3

Query: 812  ISQTTVLHTLRLIKTPSKALQFFYWAYRA-GFVHTPQSYLLMLQLLCAGRNFNTARNFLL 636
            I+  T+   L   K   K  +    A R  GF     ++  ++   C   N   A   L 
Sbjct: 334  ITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEA---LK 390

Query: 635  SIPKKSNGAVELDDKHFNCLIRAFGEAG-------LFKESLKVFQTMKSIGVSPSAVTFN 477
                 S   V  D   ++ LIR++ E         LF E  K    +   G +P   ++ 
Sbjct: 391  VFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASYK 450

Query: 476  SLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDS 297
             +F  L   GRT    E++ +LLK     P   +F  LI G C     + G+K    M  
Sbjct: 451  PIFEYLCSNGRTKKADEVFRQLLKRGTQDPP--SFKTLIMGHCREGTYEAGYKLVVLMLR 508

Query: 296  FKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEI 117
                PDV  Y++++DG    G   +A   ++ MLK  S  +P   T+ +++     K   
Sbjct: 509  RDYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLK--SSHLPRTSTFHSILAALLEKHCA 566

Query: 116  DEALGVFDEMIARGLKPN 63
             E+  +F  M+ +  +PN
Sbjct: 567  RESASLFSLMLEKNFRPN 584


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497542|gb|AES78745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  389 bits (999), Expect = e-106
 Identities = 187/298 (62%), Positives = 233/298 (78%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A+T+A LIN   WS +L +S        +S+TTV  TLR IK P+KA  FF W +  GF 
Sbjct: 59  AKTIANLINYKPWSDELLSSFTT----SLSKTTVFQTLRHIKVPTKAFLFFNWIHEKGFS 114

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           H PQ+Y +ML++L   +N N ARNFL SI K+SNG V+L+D+ FN LIR++GEAGLFKES
Sbjct: 115 HNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKES 174

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           +K+F+ MK IGVSP  VTFNS+  +L KRGRT +  E+YDE+LKTYGVKPD YT+NILIR
Sbjct: 175 VKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIR 234

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFC NSMVDEGF FFKEM SF C+PDV+TYNT+VDGLCRAGK+K+AHN++ GM KK  D 
Sbjct: 235 GFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDL 294

Query: 176 MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
            P++VTYTTLIRGYC KQE+DEAL + +EM  RGLKPN +TYNTLI GLCEA++++K+
Sbjct: 295 SPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKM 352



 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 65/275 (23%), Positives = 127/275 (46%), Gaps = 6/275 (2%)
 Frame = -3

Query: 830  DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 651
            DL+   ++ TT++      +   +AL         G      +Y  +++ LC  + ++  
Sbjct: 293  DLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKM 352

Query: 650  RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 471
            +  L  +  K +G    D   FN LI +   AG   E+ KVF+ MK + VS  + +++ L
Sbjct: 353  KEILEQM--KGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVL 410

Query: 470  FSILFKRGRTGIVFELYDEL------LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 309
               L ++G  G    L+DEL      L +YG KP   ++  + +  C N    +  +  +
Sbjct: 411  IRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLR 470

Query: 308  EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCG 129
            ++   +   D ++Y  ++ G C+ G  +  + ++  ML++  D +P+I  Y  LI G+  
Sbjct: 471  QLMK-RGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRR--DFLPDIDIYDYLIDGFLR 527

Query: 128  KQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCE 24
            K +   A    ++M+    KP   T+++++  L E
Sbjct: 528  KDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLE 562



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 7/254 (2%)
 Frame = -3

Query: 749  FFYWAYRAGFVHTPQ--SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCL 576
            F+++     F   P   +Y  ++  LC       A N +  + KK    +  D   +  L
Sbjct: 246  FYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKD-LSPDVVTYTTL 304

Query: 575  IRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYG 396
            IR +       E+L + + M   G+ P+ VT+N+L   L +  +   + E+ +++    G
Sbjct: 305  IRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGG 364

Query: 395  VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAH 216
              PD  TFN LI   C    +DE FK F+ M   +   D  +Y+ ++  LC+ G    A 
Sbjct: 365  SIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAE 424

Query: 215  NVM-----KGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITY 51
             +      K +L       P   +Y  + +  C   +  +A  V  +++ RG + + ++Y
Sbjct: 425  MLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSY 483

Query: 50   NTLIGGLCEARRFE 9
              +I G C+   +E
Sbjct: 484  QIVILGHCKEGSYE 497


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  387 bits (994), Expect = e-105
 Identities = 189/299 (63%), Positives = 234/299 (78%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           +A  MA +IN+  WS+ LE+S+A L+ P +SQTTVL TL  ++  SKALQFF WA   G+
Sbjct: 49  KATVMAEMINSKPWSSDLESSLASLS-PSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGY 107

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            HT QSY  ML++L   R+ NTARNFL SI K+S G V+L+ + FN L+R F  AGLF+E
Sbjct: 108 THTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQE 167

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+KVF  MKS GVSPS VTFNSL +IL KRGRT +  ++YDE+L TYGV PD +TFNILI
Sbjct: 168 SIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILI 227

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFCMN MVD+GF+ F ++  F CEPDV+TYNT+VDGLCRAGKV +A+NV+KGM KK  D
Sbjct: 228 RGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVD 287

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+VTYTTLIRGYC K+EI++AL VF+EM+ +GLK N+ITYNTLI GLCEAR+FEKI
Sbjct: 288 LNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 6/278 (2%)
 Frame = -3

Query: 830  DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 651
            DL    ++ TT++      +   KAL  F      G      +Y  +++ LC  R F   
Sbjct: 287  DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346

Query: 650  RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 471
            ++ L       +G    D   FN L+     AG   ++LKVF+ M  + + P + T+++L
Sbjct: 347  KDILEG--TAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404

Query: 470  FSILFKRGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFK 309
               L + G      +L D+LL+        G KP +  +N + +  C      +  K F+
Sbjct: 405  VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464

Query: 308  EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCG 129
            ++   +   D  +Y T++ G C+ G  +  + ++  ML+K  D  P+  TY +LI G   
Sbjct: 465  QL-MRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRK--DFXPDFETYESLINGLLH 521

Query: 128  KQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARR 15
              +   AL   ++M+    +PN  T+++++  L E  R
Sbjct: 522  MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR 559



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 531
           +Y  ++  LC       A N +  + KKS   V+L+     +  LIR +      +++L 
Sbjct: 257 TYNTLVDGLCRAGKVTVAYNVVKGMGKKS---VDLNPNVVTYTTLIRGYCAKREIEKALA 313

Query: 530 VFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 351
           VF+ M + G+  + +T+N+L   L +  +   + ++ +         PD  TFN L+   
Sbjct: 314 VFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCH 373

Query: 350 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK-----G 186
           C    +D+  K F+ M   K +PD  TY+ +V  LC+ G  + A +++  +L++     G
Sbjct: 374 CHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433

Query: 185 SDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
               P +  Y  + +  C   +  +A   F +++ RG + +  +Y TLI G C+   FE
Sbjct: 434 DGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFE 491


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  387 bits (994), Expect = e-105
 Identities = 189/299 (63%), Positives = 234/299 (78%)
 Frame = -3

Query: 899 RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 720
           +A  MA +IN+  WS+ LE+S+A L+ P +SQTTVL TL  ++  SKALQFF WA   G+
Sbjct: 49  KATVMAEMINSKPWSSDLESSLASLS-PSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGY 107

Query: 719 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 540
            HT QSY  ML++L   R+ NTARNFL SI K+S G V+L+ + FN L+R F  AGLF+E
Sbjct: 108 THTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQE 167

Query: 539 SLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILI 360
           S+KVF  MKS GVSPS VTFNSL +IL KRGRT +  ++YDE+L TYGV PD +TFNILI
Sbjct: 168 SIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILI 227

Query: 359 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSD 180
           RGFCMN MVD+GF+ F ++  F CEPDV+TYNT+VDGLCRAGKV +A+NV+KGM KK  D
Sbjct: 228 RGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVD 287

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
             PN+VTYTTLIRGYC K+EI++AL VF+EM+ +GLK N+ITYNTLI GLCEAR+FEKI
Sbjct: 288 LNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346



 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
 Frame = -3

Query: 830  DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 651
            DL    ++ TT++      +   KAL  F      G      +Y  +++ LC  R F   
Sbjct: 287  DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346

Query: 650  RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 471
            ++ L       +G    D   FN L+     AG   ++LKVF+ M  + + P + T+++L
Sbjct: 347  KDILEG--TAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404

Query: 470  FSILFKRGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFK 309
               L + G      +L D+LL+        G KP +  +N + +  C      +  K F+
Sbjct: 405  VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464

Query: 308  EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCG 129
            ++   +   D  +Y T++ G C+ G  +  + ++  ML+K  D +P+  TY +LI G   
Sbjct: 465  QL-MRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRK--DFLPDFETYESLINGLLH 521

Query: 128  KQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARR 15
              +   AL   ++M+    +PN  T+++++  L E  R
Sbjct: 522  MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR 559



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 531
           +Y  ++  LC       A N +  + KKS   V+L+     +  LIR +      +++L 
Sbjct: 257 TYNTLVDGLCRAGKVTVAYNVVKGMGKKS---VDLNPNVVTYTTLIRGYCAKREIEKALA 313

Query: 530 VFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 351
           VF+ M + G+  + +T+N+L   L +  +   + ++ +         PD  TFN L+   
Sbjct: 314 VFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCH 373

Query: 350 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK-----G 186
           C    +D+  K F+ M   K +PD  TY+ +V  LC+ G  + A +++  +L++     G
Sbjct: 374 CHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433

Query: 185 SDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
               P +  Y  + +  C   +  +A   F +++ RG + +  +Y TLI G C+   FE
Sbjct: 434 DGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFE 491


>gb|ESW10402.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
          Length = 728

 Score =  384 bits (987), Expect = e-104
 Identities = 190/298 (63%), Positives = 230/298 (77%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A+ MA LIN+  WS  L + +      P+S+TTVL TLRLIK PSKAL FF WA ++GF 
Sbjct: 51  AKNMADLINSKPWSNALVSPLPT----PLSKTTVLRTLRLIKDPSKALHFFKWAQQSGFP 106

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           HT QSY +MLQ+L   RN N ARN L SI KKSNG V+L D+ FN LIR++ EAGLFKES
Sbjct: 107 HTAQSYFIMLQILGRHRNLNVARNLLFSIEKKSNGTVKLGDRFFNTLIRSYAEAGLFKES 166

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           LK+FQTMKS+ VSPS VTFNS+ SIL KRGRT +  E+YDE+L TYGV PD+ T+N+LIR
Sbjct: 167 LKLFQTMKSVAVSPSVVTFNSVLSILLKRGRTNMAKEVYDEMLHTYGVTPDICTYNVLIR 226

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFC NSMVDEGF+FF EM +  C+PD++TYNT+VDGLCRAGKV+IA N++  M KK    
Sbjct: 227 GFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMTKKCEGL 286

Query: 176 MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
            PN+VTYTTLIRGYC KQE+DEAL V +EM  RG++PN ITYNTLI GLCEA + +K+
Sbjct: 287 NPNVVTYTTLIRGYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIKGLCEAHKLDKM 344



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       ARN + ++ KK  G +  +   +  LIR +       E+L V 
Sbjct: 255 TYNTLVDGLCRAGKVRIARNLVNAMTKKCEG-LNPNVVTYTTLIRGYCMKQEVDEALVVL 313

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M   G+ P+ +T+N+L   L +  +   + ++   +    G  PD +TFN +I   C 
Sbjct: 314 EEMSGRGIEPNMITYNTLIKGLCEAHKLDKMKDVLKWMKDNGGFSPDTFTFNTIIHSHCC 373

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK-----GSD 180
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A  +   + +K        
Sbjct: 374 AGNLDEALKVFESMKKFQVRMDSASYSTLIRSLCQKGDYDMAELLFDELFEKEILLCNFG 433

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
           S P +  Y+ L +  C   +  +A  V  +++ RG +    +Y TLI G C+   +E
Sbjct: 434 SKPLVAAYSPLFQYLCEHGKSKKAERVMRQLMKRGTQDAQ-SYKTLIMGHCKEGAYE 489


>ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutrema salsugineum]
           gi|557096254|gb|ESQ36836.1| hypothetical protein
           EUTSA_v10006939mg [Eutrema salsugineum]
          Length = 720

 Score =  384 bits (987), Expect = e-104
 Identities = 183/300 (61%), Positives = 236/300 (78%), Gaps = 2/300 (0%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPP--ISQTTVLHTLRLIKTPSKALQFFYWAYRAG 723
           AR+MAR +N+  WS ++E+S++ L  P   IS+TTVL TLRLIK P+  L+FF W    G
Sbjct: 41  ARSMARAVNSKPWSDEVESSLSSLLHPSESISRTTVLQTLRLIKIPADGLRFFDWVSNKG 100

Query: 722 FVHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFK 543
           F H   S+ LML+LL   RN N ARNFL SI K+SNG V+L+D++FN LIR++G AGLF+
Sbjct: 101 FSHKEHSFFLMLELLGRARNLNVARNFLFSIEKRSNGCVQLEDRYFNSLIRSYGNAGLFQ 160

Query: 542 ESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNIL 363
           ES+K+F+ MK + +SPS +TFNSL SIL KRG+TG+  +++DE+ +TYG+ PD YTFNIL
Sbjct: 161 ESVKLFEAMKKMCISPSVLTFNSLLSILLKRGKTGMALDVFDEMRRTYGLTPDSYTFNIL 220

Query: 362 IRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGS 183
           I G C NSMVDE F+ FK+M+ +KC PDV+TYNTI+DGLCRAGKVKIAHNV+ GMLKK +
Sbjct: 221 ISGLCKNSMVDEAFRIFKDMEPYKCSPDVVTYNTIIDGLCRAGKVKIAHNVLNGMLKKAA 280

Query: 182 DSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
           D  PN V+YTTL+RGYC KQEIDEAL VF +M+ RGLKPN +T+NTLI GL EA+R+++I
Sbjct: 281 DVHPNTVSYTTLVRGYCMKQEIDEALVVFHDMLTRGLKPNVVTFNTLIKGLSEAQRYDEI 340



 Score =  108 bits (270), Expect = 3e-21
 Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
 Frame = -3

Query: 599 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY 420
           D   FN LI    +  +  E+ ++F+ M+    SP  VT+N++   L + G+  I   + 
Sbjct: 213 DSYTFNILISGLCKNSMVDEAFRIFKDMEPYKCSPDVVTYNTIIDGLCRAGKVKIAHNVL 272

Query: 419 DELLKTYG-VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 243
           + +LK    V P+  ++  L+RG+CM   +DE    F +M +   +P+V+T+NT++ GL 
Sbjct: 273 NGMLKKAADVHPNTVSYTTLVRGYCMKQEIDEALVVFHDMLTRGLKPNVVTFNTLIKGLS 332

Query: 242 RAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
            A +      ++ G     +   P+  T+  LI+ +C    +D A+ VF +M+   L P+
Sbjct: 333 EAQRYDEIKEILNGRDYTSTTFAPDACTFNILIKAHCDAGHLDAAMKVFHQMVNMKLHPD 392

Query: 62  DITYNTLIGGLCEARRFEK 6
             +Y+ LI  LC    F++
Sbjct: 393 SASYSVLIRTLCLRNEFDR 411



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       A N L  + KK+   V  +   +  L+R +       E+L VF
Sbjct: 251 TYNTIIDGLCRAGKVKIAHNVLNGMLKKA-ADVHPNTVSYTTLVRGYCMKQEIDEALVVF 309

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELY---DELLKTYGVKPDLYTFNILIRG 354
             M + G+ P+ VTFN+L   L +  R   + E+    D    T+   PD  TFNILI+ 
Sbjct: 310 HDMLTRGLKPNVVTFNTLIKGLSEAQRYDEIKEILNGRDYTSTTFA--PDACTFNILIKA 367

Query: 353 FCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKK----G 186
            C    +D   K F +M + K  PD  +Y+ ++  LC   +   A  +   + +K    G
Sbjct: 368 HCDAGHLDAAMKVFHQMVNMKLHPDSASYSVLIRTLCLRNEFDRAATLFNELFEKEVLLG 427

Query: 185 SDS-MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
            D   P    Y  + +  C   +  +A  VF +++ RG + +  +Y TLI G C   +F+
Sbjct: 428 KDGCKPLAAAYNPMFQYLCANGKTKQAEKVFRQLMKRGAQ-DPPSYRTLIAGHCREGKFK 486



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
 Frame = -3

Query: 581 CLIRAFGEAG-LFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLK 405
           CL   F  A  LF E  +    +   G  P A  +N +F  L   G+T    +++ +L+K
Sbjct: 404 CLRNEFDRAATLFNELFEKEVLLGKDGCKPLAAAYNPMFQYLCANGKTKQAEKVFRQLMK 463

Query: 404 TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVK 225
                P  Y    LI G C        ++    M   +  PD+ TY  ++DGL + G+  
Sbjct: 464 RGAQDPPSY--RTLIAGHCREGKFKAAYELLVLMLRREFVPDLETYEILIDGLLKVGEAV 521

Query: 224 IAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPN 63
           +A++ ++ ML+  S  +P   T+ +++      +  +E+ G    M+ + ++ N
Sbjct: 522 LAYDTLQRMLR--SSYLPAATTFHSVLAELVKGKFANESFGFMRLMLEKRIRQN 573


>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X3 [Glycine max]
          Length = 734

 Score =  383 bits (983), Expect = e-104
 Identities = 191/298 (64%), Positives = 234/298 (78%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A+T+A LIN+  +S  L +S+       IS+TTVL TLRLIK PSKAL+FF W  + GF 
Sbjct: 54  AKTIANLINSKPFSNGLLSSLLIT----ISKTTVLRTLRLIKDPSKALRFFKWTQQKGFS 109

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           HTP+SY +ML++L   RN N ARNFL SI K S G V+L+D+ FN LIR++ EAGLFKES
Sbjct: 110 HTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKES 169

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           +K+FQTMKSI VSPS VTFNSL SIL KRGRT +  E+YDE+L TYGV PD  T+N+LIR
Sbjct: 170 MKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIR 229

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFC NSMVDEGF+FF+EM+SF C+ DV+TYNT+VDGLCRAGKV+IA N++ GM KK    
Sbjct: 230 GFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGL 289

Query: 176 MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
            PN+VTYTTLIRGYC KQE++EAL V +EM +RGLKPN ITYNTL+ GLCEA + +K+
Sbjct: 290 NPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKM 347



 Score =  102 bits (253), Expect = 3e-19
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
 Frame = -3

Query: 608 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVF 429
           V  D   +N LIR F +  +  E  + F+ M+S       VT+N+L   L + G+  I  
Sbjct: 217 VSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIAR 276

Query: 428 ELYDEL-LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVD 252
            L + +  K  G+ P++ T+  LIRG+CM   V+E     +EM S   +P++ITYNT+V 
Sbjct: 277 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 336

Query: 251 GLCRAGKVKIAHNVMKGMLKKGS----------------------------DSMPNI--- 165
           GLC A K+    +V++ M   G                             +SM      
Sbjct: 337 GLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIP 396

Query: 164 ---VTYTTLIRGYCGKQEIDEALGVFDEMIAR-------GLKPNDITYNTLIGGLCEARR 15
               +Y+TLIR  C K + D A  +FDE+  +       G KP   +YN +   LCE  +
Sbjct: 397 ADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGK 456

Query: 14  FEK 6
            +K
Sbjct: 457 TKK 459



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       ARN +  + KK  G +  +   +  LIR +      +E+L V 
Sbjct: 258 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVL 316

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M S G+ P+ +T+N+L   L +  +   + ++ + +    G  PD +TFN +I   C 
Sbjct: 317 EEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCC 376

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A  +      K +L     
Sbjct: 377 AGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFG 436

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
           S P   +Y  +    C   +  +A  V  +++ RG + +  +Y T+I G C+   +E
Sbjct: 437 SKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYE 492



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 40/254 (15%)
 Frame = -3

Query: 704  SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
            +Y  +++ LC     +  ++ L  +  KS+G    D   FN +I     AG   E+LKVF
Sbjct: 330  TYNTLVKGLCEAHKLDKMKDVLERM--KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVF 387

Query: 524  QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDEL------LKTYGVKP-------- 387
            ++MK   +   + ++++L   L ++G   +  +L+DEL      L  +G KP        
Sbjct: 388  ESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPI 447

Query: 386  --------------------------DLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCE 285
                                      D  ++  +I G C     + G++    M      
Sbjct: 448  FESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFL 507

Query: 284  PDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEAL 105
            PD+  Y+ ++DG  +  K  +A   ++ MLK  S   P   T+ +++     K    E+ 
Sbjct: 508  PDIEIYDYLIDGFLQKDKPLLAKETLEKMLK--SSYQPKTSTWHSVLAKLLEKGCAHESS 565

Query: 104  GVFDEMIARGLKPN 63
             V   M+ + ++ N
Sbjct: 566  CVIVMMLEKNVRQN 579


>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 741

 Score =  383 bits (983), Expect = e-104
 Identities = 191/298 (64%), Positives = 234/298 (78%)
 Frame = -3

Query: 896 ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 717
           A+T+A LIN+  +S  L +S+       IS+TTVL TLRLIK PSKAL+FF W  + GF 
Sbjct: 52  AKTIANLINSKPFSNGLLSSLLIT----ISKTTVLRTLRLIKDPSKALRFFKWTQQKGFS 107

Query: 716 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 537
           HTP+SY +ML++L   RN N ARNFL SI K S G V+L+D+ FN LIR++ EAGLFKES
Sbjct: 108 HTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKES 167

Query: 536 LKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 357
           +K+FQTMKSI VSPS VTFNSL SIL KRGRT +  E+YDE+L TYGV PD  T+N+LIR
Sbjct: 168 MKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIR 227

Query: 356 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDS 177
           GFC NSMVDEGF+FF+EM+SF C+ DV+TYNT+VDGLCRAGKV+IA N++ GM KK    
Sbjct: 228 GFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGL 287

Query: 176 MPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFEKI 3
            PN+VTYTTLIRGYC KQE++EAL V +EM +RGLKPN ITYNTL+ GLCEA + +K+
Sbjct: 288 NPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKM 345



 Score =  102 bits (253), Expect = 3e-19
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
 Frame = -3

Query: 608 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFKRGRTGIVF 429
           V  D   +N LIR F +  +  E  + F+ M+S       VT+N+L   L + G+  I  
Sbjct: 215 VSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIAR 274

Query: 428 ELYDEL-LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVD 252
            L + +  K  G+ P++ T+  LIRG+CM   V+E     +EM S   +P++ITYNT+V 
Sbjct: 275 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 334

Query: 251 GLCRAGKVKIAHNVMKGMLKKGS----------------------------DSMPNI--- 165
           GLC A K+    +V++ M   G                             +SM      
Sbjct: 335 GLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIP 394

Query: 164 ---VTYTTLIRGYCGKQEIDEALGVFDEMIAR-------GLKPNDITYNTLIGGLCEARR 15
               +Y+TLIR  C K + D A  +FDE+  +       G KP   +YN +   LCE  +
Sbjct: 395 ADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGK 454

Query: 14  FEK 6
            +K
Sbjct: 455 TKK 457



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
 Frame = -3

Query: 704 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
           +Y  ++  LC       ARN +  + KK  G +  +   +  LIR +      +E+L V 
Sbjct: 256 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVL 314

Query: 524 QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 345
           + M S G+ P+ +T+N+L   L +  +   + ++ + +    G  PD +TFN +I   C 
Sbjct: 315 EEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCC 374

Query: 344 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM-----KGMLKKGSD 180
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A  +      K +L     
Sbjct: 375 AGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFG 434

Query: 179 SMPNIVTYTTLIRGYCGKQEIDEALGVFDEMIARGLKPNDITYNTLIGGLCEARRFE 9
           S P   +Y  +    C   +  +A  V  +++ RG + +  +Y T+I G C+   +E
Sbjct: 435 SKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYE 490



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 40/254 (15%)
 Frame = -3

Query: 704  SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 525
            +Y  +++ LC     +  ++ L  +  KS+G    D   FN +I     AG   E+LKVF
Sbjct: 328  TYNTLVKGLCEAHKLDKMKDVLERM--KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVF 385

Query: 524  QTMKSIGVSPSAVTFNSLFSILFKRGRTGIVFELYDEL------LKTYGVKP-------- 387
            ++MK   +   + ++++L   L ++G   +  +L+DEL      L  +G KP        
Sbjct: 386  ESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPI 445

Query: 386  --------------------------DLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCE 285
                                      D  ++  +I G C     + G++    M      
Sbjct: 446  FESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFL 505

Query: 284  PDVITYNTIVDGLCRAGKVKIAHNVMKGMLKKGSDSMPNIVTYTTLIRGYCGKQEIDEAL 105
            PD+  Y+ ++DG  +  K  +A   ++ MLK  S   P   T+ +++     K    E+ 
Sbjct: 506  PDIEIYDYLIDGFLQKDKPLLAKETLEKMLK--SSYQPKTSTWHSVLAKLLEKGCAHESS 563

Query: 104  GVFDEMIARGLKPN 63
             V   M+ + ++ N
Sbjct: 564  CVIVMMLEKNVRQN 577