BLASTX nr result
ID: Catharanthus22_contig00024968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00024968
(345 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP43917.1| integrase [Gossypium hirsutum] 76 7e-13
gb|AAP43918.1| integrase [Gossypium hirsutum] 77 2e-12
gb|AAP43916.1| integrase [Gossypium herbaceum] 73 4e-12
gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Jap... 71 6e-12
emb|CAN81132.1| hypothetical protein VITISV_009934 [Vitis vinifera] 69 8e-12
gb|ADN34141.1| ty3-gypsy retrotransposon protein [Cucumis melo s... 74 1e-11
gb|ABA98922.2| retrotransposon protein, putative, Ty3-gypsy subc... 72 2e-11
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ... 66 3e-11
ref|XP_004516026.1| PREDICTED: uncharacterized protein LOC101515... 67 4e-11
gb|ABA96440.2| retrotransposon protein, putative, Ty3-gypsy subc... 66 2e-10
gb|AAP43915.1| integrase [Gossypium herbaceum] 70 2e-10
emb|CBL94172.1| putative retrotransposon protein [Malus domestica] 66 2e-10
emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera] 67 4e-10
gb|ABA98852.1| retrotransposon protein, putative, Ty3-gypsy subc... 67 4e-10
gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group] 65 4e-10
ref|XP_004974643.1| PREDICTED: uncharacterized protein LOC101776... 69 5e-10
gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-... 66 5e-10
emb|CAN62617.1| hypothetical protein VITISV_036166 [Vitis vinifera] 62 5e-10
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 66 8e-10
gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 8e-10
>gb|AAP43917.1| integrase [Gossypium hirsutum]
Length = 355
Score = 76.3 bits (186), Expect(2) = 7e-13
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 18/116 (15%)
Frame = +1
Query: 1 LSQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSR------------------SA 126
+SQKDLN+RQRRW+ELL+ Y I+YHP KANVV +AL+R +
Sbjct: 65 MSQKDLNLRQRRWLELLKDYELVIDYHPGKANVVADALNRKLLFALRVMNTQLKISDDGS 124
Query: 127 ELECLTLTSTWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
L L + Q I +AQK ++ + Q EA DF++ + G L FKNR+C
Sbjct: 125 ILAELRARPMFLQEISEAQKNDQNLLAKRKQCEADTRSDFRI-GSNGCLMFKNRIC 179
Score = 22.7 bits (47), Expect(2) = 7e-13
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
CVP E+ K+L EAH
Sbjct: 179 CVPKNDELIQKILHEAH 195
>gb|AAP43918.1| integrase [Gossypium hirsutum]
Length = 350
Score = 76.6 bits (187), Expect(2) = 2e-12
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 18/116 (15%)
Frame = +1
Query: 1 LSQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSR------------------SA 126
+SQKDLN+RQRRW+ELL+ Y I+YHP K NVV +ALSR +
Sbjct: 60 MSQKDLNLRQRRWLELLKDYELVIDYHPGKTNVVVDALSRRLLFALRVMNTQLKISDDGS 119
Query: 127 ELECLTLTSTWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
L L S + Q I +AQK +++ + Q EA DF++ ++G L FKN++C
Sbjct: 120 ILAELRARSMFLQEISEAQKNDQDLLAKRKQCEADMGSDFRI-GSDGCLMFKNQIC 174
Score = 20.8 bits (42), Expect(2) = 2e-12
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
CVP E+ +L EAH
Sbjct: 174 CVPKNDELIQNILHEAH 190
>gb|AAP43916.1| integrase [Gossypium herbaceum]
Length = 353
Score = 73.2 bits (178), Expect(2) = 4e-12
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 18/116 (15%)
Frame = +1
Query: 1 LSQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSR------------------SA 126
L+QK+LN+RQRRW+ELL+ Y C+I YHP KANVV +ALSR +
Sbjct: 59 LTQKELNLRQRRWIELLKDYDCSIEYHPGKANVVADALSRRTVSDLRAMFARLSLYDDGS 118
Query: 127 ELECLTLTSTWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
L L + TW I++ Q +E QV+ K +F + N +G L F+ R+C
Sbjct: 119 LLAELQVRPTWVDQIKEKQLEDESLVTRFQQVKEGKTSEFGL-NGDGVLCFRGRIC 173
Score = 23.5 bits (49), Expect(2) = 4e-12
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
CVP +++++ +L+EAH
Sbjct: 173 CVPKDSDLRQTILKEAH 189
>gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Japonica Group]
gi|108709291|gb|ABF97086.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1461
Score = 71.2 bits (173), Expect(2) = 6e-12
Identities = 38/97 (39%), Positives = 53/97 (54%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQ 183
+Q DLN+RQRRW+EL++ Y +I+YHP KANVV +ALSR + L + G AQ
Sbjct: 925 TQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGIRSGGTAYAQ 984
Query: 184 KRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
+ E K + K DF + G++ RLC
Sbjct: 985 ANDSEIAELKKNMSVGKARDFHE-DEHGTIWLGERLC 1020
Score = 24.6 bits (52), Expect(2) = 6e-12
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP++ E+K +L EAH+
Sbjct: 1020 CVPDDKELKDLILTEAHQ 1037
>emb|CAN81132.1| hypothetical protein VITISV_009934 [Vitis vinifera]
Length = 730
Score = 68.6 bits (166), Expect(2) = 8e-12
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQ 183
SQK+LNMRQRRW+ELL+ Y C I YH KANVV +ALSR + + L + I+ Q
Sbjct: 392 SQKELNMRQRRWIELLKDYDCIIQYHLGKANVVADALSRKS-VGSLAAFRDLVERIKALQ 450
Query: 184 KRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
K + + +V+ DF V + +G L F+ RLC
Sbjct: 451 KNDLNLVQLMEEVKKGSKPDF-VLSDDGILMFRTRLC 486
Score = 26.9 bits (58), Expect(2) = 8e-12
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
CVPN+ +++ ++LEEAH
Sbjct: 486 CVPNDGDLRRELLEEAH 502
>gb|ADN34141.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 1359
Score = 74.3 bits (181), Expect(2) = 1e-11
Identities = 43/96 (44%), Positives = 60/96 (62%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQ 183
+QK+LNMRQRRW+EL++ Y C I YHP KANVV +ALSR +L LT+ T +Q I AQ
Sbjct: 786 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR--KLAQLTVQPTLRQKIIDAQ 843
Query: 184 KRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRL 291
N + E + +F + +++G L F+ RL
Sbjct: 844 SNNPYLVGKRGLAETGQAVEFSI-SSDGGLLFERRL 878
Score = 20.4 bits (41), Expect(2) = 1e-11
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +2
Query: 293 VPNEAEIK*KVLEEAH 340
VP+++ +K ++L EAH
Sbjct: 880 VPSDSAVKTELLSEAH 895
>gb|ABA98922.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1674
Score = 71.6 bits (174), Expect(2) = 2e-11
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 17/114 (14%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSA----------------ELE 135
+Q +LNMRQRRW+EL++ Y I+YHP KANVV +ALSR A ELE
Sbjct: 1132 TQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDRLCRELE 1191
Query: 136 CLTLT-STWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
L LT T + I++AQK +E + +++ KK DF + + +G++ R+C
Sbjct: 1192 KLRLTVPTLESQIREAQKDDEGIKELIKRIQEKKDTDFSI-DDQGTVWCGPRIC 1244
Score = 22.7 bits (47), Expect(2) = 2e-11
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP + E++ +L+EAH+
Sbjct: 1244 CVPAKKELRDLILKEAHE 1261
>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 482
Score = 65.9 bits (159), Expect(2) = 3e-11
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 31/127 (24%)
Frame = +1
Query: 7 QKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSR---------------------- 120
QK+LNMRQRRW+ELL+ Y +NYHP KANVV +ALSR
Sbjct: 142 QKELNMRQRRWLELLKDYDFGLNYHPGKANVVADALSRKTLHMSALMVREFELLEQFRDL 201
Query: 121 ---------SAELECLTLTSTWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSL 273
S +L L + S + + I++AQK + +F + DF+V + G L
Sbjct: 202 SLVCEWSPQSVKLGMLKIDSEFLKSIKEAQKVDVKFVDLLVASNQTEDSDFKV-DDHGVL 260
Query: 274 HFKNRLC 294
F+ R+C
Sbjct: 261 RFRGRIC 267
Score = 27.7 bits (60), Expect(2) = 3e-11
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
C+P++AE+K +LEE+H+
Sbjct: 267 CIPDDAEMKKMILEESHR 284
>ref|XP_004516026.1| PREDICTED: uncharacterized protein LOC101515101 [Cicer arietinum]
Length = 1097
Score = 67.4 bits (163), Expect(2) = 4e-11
Identities = 40/96 (41%), Positives = 57/96 (59%)
Frame = +1
Query: 7 QKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQK 186
Q+DLN+RQRRWMELL+ Y C I YHP KANVV +ALSR + + + +++ Q+
Sbjct: 871 QRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRKSMGSLSHIAEVKRSIVKEFQE 930
Query: 187 RNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
E + + K+ DF V +++G L K RLC
Sbjct: 931 VVESGIQLELGHNG-KISDFSV-DSDGVLRLKARLC 964
Score = 25.8 bits (55), Expect(2) = 4e-11
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
C+PN ++ K+LEEAH
Sbjct: 964 CIPNVGGLRRKILEEAH 980
>gb|ABA96440.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1652
Score = 66.2 bits (160), Expect(2) = 2e-10
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLT------STWQQ 165
+Q DLN+RQRRW+EL++ Y +I+YHP KANVV +ALSR + L + + + +
Sbjct: 1187 TQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGIRSGGTAYAR 1246
Query: 166 GIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
G +++ + E K + K DF + G++ RLC
Sbjct: 1247 GSSQSRVNDSEIAELKKNMRVGKARDFHE-DEHGTIWLGERLC 1288
Score = 24.6 bits (52), Expect(2) = 2e-10
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP++ E+K +L EAH+
Sbjct: 1288 CVPDDKELKDLILTEAHQ 1305
>gb|AAP43915.1| integrase [Gossypium herbaceum]
Length = 350
Score = 70.1 bits (170), Expect(2) = 2e-10
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 21/119 (17%)
Frame = +1
Query: 1 LSQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRS------------------- 123
++Q+DLN+RQRRW+ELL+ Y I+YHP KAN+V +ALSR
Sbjct: 60 MTQRDLNLRQRRWLELLKDYELVIDYHPGKANMVADALSRKSLFALRAMNVYLSILPDNV 119
Query: 124 --AELECLTLTSTWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
AEL+ L + I++AQK +EE +A+ K +FQ+ + + L F++RLC
Sbjct: 120 LVAELKAKPLLT---HQIREAQKVDEELLAKRAECVLNKESEFQI-DDDDCLRFRSRLC 174
Score = 20.8 bits (42), Expect(2) = 2e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
CVP +E+ +L EAH
Sbjct: 174 CVPKNSELILIILNEAH 190
>emb|CBL94172.1| putative retrotransposon protein [Malus domestica]
Length = 1353
Score = 66.2 bits (160), Expect(2) = 2e-10
Identities = 38/96 (39%), Positives = 53/96 (55%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQ 183
+Q DLN+RQRRWMELL Y C I YH +ANVV ALSR ++ + + I +AQ
Sbjct: 956 TQHDLNLRQRRWMELLSDYDCTIEYHSGRANVVAEALSRKPQVRPVLV-----DRILEAQ 1010
Query: 184 KRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRL 291
+EE Q K D ++ ++G L +NR+
Sbjct: 1011 MVDEEIQEMVQLRNEGKKKDLRIRESDGMLMQENRM 1046
Score = 24.3 bits (51), Expect(2) = 2e-10
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 293 VPNEAEIK*KVLEEAH 340
VPN E+K ++L+EAH
Sbjct: 1048 VPNNEELKNEILDEAH 1063
>emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]
Length = 1313
Score = 66.6 bits (161), Expect(2) = 4e-10
Identities = 39/97 (40%), Positives = 54/97 (55%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQ 183
+QKDLN RQRRWM LE Y A++YHP K N V +ALSR + I +AQ
Sbjct: 798 TQKDLNSRQRRWMXTLEDYDFALHYHPGKXNXVADALSRKSR-------------IXEAQ 844
Query: 184 KRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
+E ++ KA + A ++ + +GS+ FK RLC
Sbjct: 845 VHDEFLEKVKAXLVAGEIDENWSMYEDGSVRFKGRLC 881
Score = 23.1 bits (48), Expect(2) = 4e-10
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP + E++ ++L +AH+
Sbjct: 881 CVPKDVELRNELLADAHR 898
>gb|ABA98852.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1275
Score = 67.0 bits (162), Expect(2) = 4e-10
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 17/114 (14%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSA----------------ELE 135
+Q +LNMRQRRW+EL++ Y I+YHP K NV+ +ALSR ELE
Sbjct: 782 TQTELNMRQRRWLELIKDYDLGIHYHPGKTNVITDALSRKTYCNAAQILLDQDRLCKELE 841
Query: 136 CLTLT-STWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
L LT T + I++AQK +E + +++ KK DF + + +G + R+C
Sbjct: 842 KLRLTVPTLEMQIREAQKDDEGIKELIKRIQEKKDTDFSI-DDQGIVWCGPRIC 894
Score = 22.7 bits (47), Expect(2) = 4e-10
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP + E++ +L+EAH+
Sbjct: 894 CVPAKKELRDLILKEAHE 911
>gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1142
Score = 65.1 bits (157), Expect(2) = 4e-10
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSA--------ELECLTLTSTW 159
+Q DLN+RQRRW+EL++ Y +I+YHP KANVV +ALSR + + L T
Sbjct: 730 TQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGMSALEARPTL 789
Query: 160 QQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
++ AQ + E K + K DF + + G++ RLC
Sbjct: 790 VDQVRAAQVNDPEIAELKKNMRVGKARDF-LEDEHGTIWLGERLC 833
Score = 24.6 bits (52), Expect(2) = 4e-10
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP++ E+K +L EAH+
Sbjct: 833 CVPDDKELKNLILTEAHQ 850
>ref|XP_004974643.1| PREDICTED: uncharacterized protein LOC101776408 [Setaria italica]
Length = 1375
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/50 (60%), Positives = 40/50 (80%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTS 153
+Q DLNMRQRRW+EL++ Y+ I+YHP KANVV +ALSR A+ C+T+ S
Sbjct: 777 TQMDLNMRQRRWLELIKDYKLEIHYHPGKANVVADALSRKAQCHCMTIQS 826
>gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548962|gb|ABA91759.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1416
Score = 65.9 bits (159), Expect(2) = 5e-10
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 29/126 (23%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSA----------------ELE 135
+Q +LNMRQRRW+EL++ Y I+YHP KANVV +ALSR A ELE
Sbjct: 949 TQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELE 1008
Query: 136 CLTLT-------------STWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLH 276
L LT T + I++AQK +E + +++ KK +F + + +G++
Sbjct: 1009 KLRLTVVQSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSI-DDQGTVW 1067
Query: 277 FKNRLC 294
R+C
Sbjct: 1068 CGQRIC 1073
Score = 23.5 bits (49), Expect(2) = 5e-10
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP + E++ +L+EAH+
Sbjct: 1073 CVPTKKELRDLILKEAHE 1090
>emb|CAN62617.1| hypothetical protein VITISV_036166 [Vitis vinifera]
Length = 873
Score = 61.6 bits (148), Expect(2) = 5e-10
Identities = 38/94 (40%), Positives = 51/94 (54%)
Frame = +1
Query: 13 DLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSAELECLTLTSTWQQGIQKAQKRN 192
+LNMRQRRW+EL + Y C I YHP K NVV N LSR + T+ +G QK ++
Sbjct: 515 ELNMRQRRWIELXKDYDCIIQYHPGKXNVVXNXLSRKSVGSLSTI-----RGCQKQLLQD 569
Query: 193 EEFQRFKAQVEAKKLYDFQV*NTEGSLHFKNRLC 294
+ +V+ DF V + G L FK +LC
Sbjct: 570 LRSLQLMEEVKRGSKPDF-VLSDYGILRFKTKLC 602
Score = 27.7 bits (60), Expect(2) = 5e-10
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAH 340
CVPN+ ++ K+LEEAH
Sbjct: 602 CVPNDGNLRRKLLEEAH 618
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 65.9 bits (159), Expect(2) = 8e-10
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 29/126 (23%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSA----------------ELE 135
+Q +LNMRQRRW+EL++ Y I+YHP KANVV +ALSR A ELE
Sbjct: 1297 TQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDQLCRELE 1356
Query: 136 CLTLT-------------STWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLH 276
L LT T + I++AQK +E + +++ KK +F + + +G++
Sbjct: 1357 KLRLTVVQSGVPASLTVQPTLESQIREAQKEDEGIKELIERIQEKKDTNFSI-DDQGTVW 1415
Query: 277 FKNRLC 294
R+C
Sbjct: 1416 CGPRIC 1421
Score = 22.7 bits (47), Expect(2) = 8e-10
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP + E++ +L+EAH+
Sbjct: 1421 CVPAKKELRDLILKEAHE 1438
>gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1481
Score = 65.1 bits (157), Expect(2) = 8e-10
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 29/126 (23%)
Frame = +1
Query: 4 SQKDLNMRQRRWMELLEKYRCAINYHPRKANVVPNALSRSA----------------ELE 135
+Q +LNMRQRRW+EL++ Y I+YHP KANVV +ALSR A ELE
Sbjct: 949 TQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDHLCRELE 1008
Query: 136 CLTLT-------------STWQQGIQKAQKRNEEFQRFKAQVEAKKLYDFQV*NTEGSLH 276
L LT T + I++AQK +E + +++ KK +F + + +G++
Sbjct: 1009 KLRLTVVQSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSI-DDQGTVW 1067
Query: 277 FKNRLC 294
R+C
Sbjct: 1068 CGPRIC 1073
Score = 23.5 bits (49), Expect(2) = 8e-10
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 290 CVPNEAEIK*KVLEEAHK 343
CVP + EI+ +L+EAH+
Sbjct: 1073 CVPAKKEIRDLILKEAHE 1090