BLASTX nr result
ID: Catharanthus22_contig00024740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00024740
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 142 5e-32
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-31
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 139 5e-31
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 135 6e-30
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 135 7e-30
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 134 1e-29
gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus... 134 1e-29
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe... 132 4e-29
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 132 5e-29
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr... 132 5e-29
ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containi... 131 1e-28
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis] 130 2e-28
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 129 3e-28
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ... 129 3e-28
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 128 9e-28
ref|XP_006299802.1| hypothetical protein CARUB_v10015998mg, part... 125 6e-27
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum tuberosum]
Length = 467
Score = 142 bits (358), Expect = 5e-32
Identities = 68/101 (67%), Positives = 76/101 (75%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVK+AKKFL VM E GH PDAVTYTSLMNGMCR +GC P
Sbjct: 313 GLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKMEARGCAP 372
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSYG 303
N+CTYNTLLHGLCK RLLDKG++LY VMK+ + +LETGSYG
Sbjct: 373 NSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNSTKLETGSYG 413
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Solanum lycopersicum]
Length = 469
Score = 142 bits (357), Expect = 6e-32
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVK+AKKFL VM E GH PDAVTYTSLMNGMCR +GC P
Sbjct: 315 GLSKSGRVKDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKMEARGCAP 374
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSYG 303
N+CTYNTLLHGLCK RLLDKG++LY VMK+ +LETGSYG
Sbjct: 375 NSCTYNTLLHGLCKGRLLDKGMKLYDVMKQNGTKLETGSYG 415
>ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like, partial [Vitis vinifera]
Length = 253
Score = 139 bits (349), Expect = 5e-31
Identities = 65/100 (65%), Positives = 76/100 (76%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVKEA+KFL +MAE GHFPDAVTYTSLMNG+CR +GC+P
Sbjct: 99 GLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALALLEEMEAKGCSP 158
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHGLCK R+L++GI+LY VMK G M+LE SY
Sbjct: 159 NSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASY 198
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 139 bits (349), Expect = 5e-31
Identities = 65/100 (65%), Positives = 76/100 (76%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVKEA+KFL +MAE GHFPDAVTYTSLMNG+CR +GC+P
Sbjct: 318 GLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALALLEEMEAKGCSP 377
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHGLCK R+L++GI+LY VMK G M+LE SY
Sbjct: 378 NSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASY 417
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 135 bits (340), Expect = 6e-30
Identities = 62/100 (62%), Positives = 76/100 (76%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSK GRV EAK++L++M E+GHFPDAVTYTSLMNG+CR +GC+P
Sbjct: 304 GLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGALALLEDMEMKGCSP 363
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLL+GLCK RLL+KGI+LY V+KEG M L+T SY
Sbjct: 364 NSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASY 403
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 135 bits (339), Expect = 7e-30
Identities = 62/100 (62%), Positives = 74/100 (74%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVKEA+K+L +M E+GHFPDAVTYTSLMNGMCR +GC+P
Sbjct: 310 GLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMCREGNALGAVLLLEEMERKGCSP 369
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHGLCK RL++KG++LY+ MK M LE SY
Sbjct: 370 NSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASY 409
>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 135 bits (339), Expect = 7e-30
Identities = 65/100 (65%), Positives = 75/100 (75%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVKEA+ FL +MAE GHFPDAVTYTSLMNGMCR +GC P
Sbjct: 310 GLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNP 369
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHGL K+RLLD+GI+LY +MK +M+LET SY
Sbjct: 370 NSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASY 409
>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 135 bits (339), Expect = 7e-30
Identities = 65/100 (65%), Positives = 75/100 (75%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRVKEA+ FL +MAE GHFPDAVTYTSLMNGMCR +GC P
Sbjct: 310 GLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNP 369
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHGL K+RLLD+GI+LY +MK +M+LET SY
Sbjct: 370 NSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASY 409
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 134 bits (338), Expect = 1e-29
Identities = 62/100 (62%), Positives = 74/100 (74%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSK GRV EAKK L++M E+GHFPDAVTYTSLMNGMCR +GC+P
Sbjct: 308 GLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAALLEEMELKGCSP 367
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHG CK R L+KG++LY V+K+G M+LET SY
Sbjct: 368 NSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASY 407
>gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus vulgaris]
Length = 462
Score = 134 bits (337), Expect = 1e-29
Identities = 64/101 (63%), Positives = 74/101 (73%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRV EAKK LRVMAE G+FPD VTYT+LMNGMCR +GC+P
Sbjct: 308 GLSKSGRVVEAKKLLRVMAEKGYFPDEVTYTTLMNGMCRKGEVLAALALLGEMEGKGCSP 367
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSYG 303
N CTYNTLLHGLCKARLL+K I+ Y V+KEG ++ +T SYG
Sbjct: 368 NECTYNTLLHGLCKARLLEKAIEFYGVIKEGGLKFDTASYG 408
>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
Length = 464
Score = 132 bits (333), Expect = 4e-29
Identities = 64/100 (64%), Positives = 72/100 (72%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSK GRV EAKK+L VM E GHFPDAVTYTSLMNG+CR +GC P
Sbjct: 310 GLSKCGRVVEAKKYLGVMVEMGHFPDAVTYTSLMNGLCRKGDVLGALGLLEEMQEKGCEP 369
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N CTYNTLLHGLCKA+LL+KG+ LY VMKE M+L+T SY
Sbjct: 370 NVCTYNTLLHGLCKAKLLEKGLDLYGVMKECGMKLDTASY 409
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 132 bits (332), Expect = 5e-29
Identities = 61/100 (61%), Positives = 75/100 (75%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSK GRV EAKKFL++M E G PDAVTYTSLMNGMCR +GC+P
Sbjct: 311 GLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSP 370
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLL+GLCK+RL++KGI+LY+ MKEG ++LET +Y
Sbjct: 371 NSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAY 410
>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
gi|557527305|gb|ESR38555.1| hypothetical protein
CICLE_v10025555mg [Citrus clementina]
Length = 465
Score = 132 bits (332), Expect = 5e-29
Identities = 61/100 (61%), Positives = 75/100 (75%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSK GRV EAKKFL++M E G PDAVTYTSLMNGMCR +GC+P
Sbjct: 311 GLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEMEGKGCSP 370
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLL+GLCK+RL++KGI+LY+ MKEG ++LET +Y
Sbjct: 371 NSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAY 410
>ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform 1 [Fragaria vesca subsp. vesca]
gi|470102614|ref|XP_004287746.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 450
Score = 131 bits (329), Expect = 1e-28
Identities = 61/101 (60%), Positives = 72/101 (71%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSK GRV +AKK+L +M E GHFPD VTYTSLMNG+CR QGC P
Sbjct: 301 GLSKCGRVMDAKKYLWIMVEMGHFPDEVTYTSLMNGLCRKGDALGAVALLSEMQAQGCRP 360
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSYG 303
N CTYNTLLHGLCK RLL+KG++LY +MK+ M+L+T SYG
Sbjct: 361 NECTYNTLLHGLCKGRLLEKGLELYGLMKKDGMKLDTASYG 401
>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
Length = 444
Score = 130 bits (326), Expect = 2e-28
Identities = 57/100 (57%), Positives = 74/100 (74%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GL+KSGR KEA+K+L++MAE GH PD VTYTSLMNG+CR +GC P
Sbjct: 290 GLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYALLEEMKERGCEP 349
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N CTYNTLLHG CKA+++++G++LY+VMKE MEL+T +Y
Sbjct: 350 NECTYNTLLHGFCKAKMVERGVELYRVMKERGMELDTAAY 389
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 129 bits (325), Expect = 3e-28
Identities = 63/100 (63%), Positives = 71/100 (71%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRV EAKK LRVMAE GHFPD VTYTSLMNG+CR GC+P
Sbjct: 310 GLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIALLEEMEAIGCSP 369
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N+CTYNTLLHGLCK+RL DK ++LY MK G ++LE SY
Sbjct: 370 NSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASY 409
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 129 bits (325), Expect = 3e-28
Identities = 61/100 (61%), Positives = 70/100 (70%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRV EAKK LRVMAE GHFPD VTYTSLMNGMCR +GC+P
Sbjct: 313 GLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSP 372
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N CTYNTLLHGLCK+R+ DK ++LY MK ++L+ SY
Sbjct: 373 NTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASY 412
>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 472
Score = 129 bits (325), Expect = 3e-28
Identities = 61/100 (61%), Positives = 70/100 (70%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRV EAKK LRVMAE GHFPD VTYTSLMNGMCR +GC+P
Sbjct: 316 GLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSP 375
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
N CTYNTLLHGLCK+R+ DK ++LY MK ++L+ SY
Sbjct: 376 NTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASY 415
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 128 bits (321), Expect = 9e-28
Identities = 60/100 (60%), Positives = 74/100 (74%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRV+EA+K+L+ M E G+ PDAVTYTSLMNGMCR +GC P
Sbjct: 308 GLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEMEARGCAP 367
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSY 300
NACTYNTLL+GLCKARL+DKGI+LY +MK ++LE+ +Y
Sbjct: 368 NACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESSAY 407
>ref|XP_006299802.1| hypothetical protein CARUB_v10015998mg, partial [Capsella rubella]
gi|482568511|gb|EOA32700.1| hypothetical protein
CARUB_v10015998mg, partial [Capsella rubella]
Length = 408
Score = 125 bits (314), Expect = 6e-27
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = +1
Query: 1 GLSKSGRVKEAKKFLRVMAETGHFPDAVTYTSLMNGMCRXXXXXXXXXXXXXXXXQGCTP 180
GLSKSGRV+EA+++L+ M + G PDA TYTSLMNGMCR +GC P
Sbjct: 291 GLSKSGRVEEARRYLKTMVDAGFEPDAATYTSLMNGMCRKGESLGALSLLEEMEAKGCAP 350
Query: 181 NACTYNTLLHGLCKARLLDKGIQLYKVMKEGNMELETGSYG 303
N CTYNTLLHGLCKARL+DKG++LY++MK ++LE+ YG
Sbjct: 351 NDCTYNTLLHGLCKARLMDKGMELYELMKSNGVKLESNGYG 391