BLASTX nr result
ID: Catharanthus22_contig00024666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00024666
(1926 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 prote... 114 1e-22
ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 prote... 112 7e-22
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 109 5e-21
ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 prote... 106 4e-20
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr... 102 5e-19
emb|CBI24843.3| unnamed protein product [Vitis vinifera] 100 2e-18
ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, par... 100 2e-18
gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus nota... 100 3e-18
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 97 3e-17
ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 prote... 96 4e-17
ref|XP_006289685.1| hypothetical protein CARUB_v10003242mg [Caps... 94 2e-16
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab... 92 8e-16
ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Caps... 91 1e-15
ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arab... 90 4e-15
ref|XP_006402677.1| hypothetical protein EUTSA_v10005819mg [Eutr... 89 9e-15
ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicag... 87 3e-14
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops... 85 1e-13
ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidop... 85 1e-13
ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 prote... 85 1e-13
ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 prote... 84 2e-13
>ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
tuberosum]
Length = 675
Score = 114 bits (286), Expect = 1e-22
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = -3
Query: 1924 GTPESGSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSR 1745
GTP ++ KQ+GT EFD SAR RAVAQYL+ QS TP SE++ G +SLN+ILE K +
Sbjct: 579 GTP----LSSKQKGTPEFDTLSARTRAVAQYLKGQSPVTPISEET-GDISLNAILEGKKK 633
Query: 1744 KVCARMFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKL 1631
++CARMF+ETLVL+N GLV A+Q EPYGDI L+VT KL
Sbjct: 634 RICARMFYETLVLENCGLVRANQHEPYGDITLKVTSKL 671
>ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
lycopersicum]
Length = 668
Score = 112 bits (279), Expect = 7e-22
Identities = 61/98 (62%), Positives = 75/98 (76%)
Frame = -3
Query: 1924 GTPESGSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSR 1745
GTP ++ KQRGT EFD SAR RAVAQYL+ QS T SE++ G +SLN+ILE K +
Sbjct: 570 GTP----LSSKQRGTPEFDTLSARTRAVAQYLKGQSPVTLISEET-GDISLNAILEGKKK 624
Query: 1744 KVCARMFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKL 1631
++CARMF+ETLVL+N GLV A+Q EPYGDI L+VT KL
Sbjct: 625 RICARMFYETLVLENCGLVRANQHEPYGDITLKVTSKL 662
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 109 bits (272), Expect = 5e-21
Identities = 57/90 (63%), Positives = 64/90 (71%)
Frame = -3
Query: 1885 GTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLVL 1706
GT + S R RAVAQYL+ S P SE LSLN ILE K+RK+ ARMFFETLVL
Sbjct: 672 GTQDVSTLSIRTRAVAQYLQNHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVL 731
Query: 1705 KNYGLVDAHQEEPYGDIKLRVTPKLWKEQF 1616
KNYGLVD QEEPYGDI L++TPKL K +F
Sbjct: 732 KNYGLVDVQQEEPYGDITLKMTPKLSKARF 761
>ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Citrus
sinensis]
Length = 735
Score = 106 bits (264), Expect = 4e-20
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = -3
Query: 1870 DDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLVLKNYGL 1691
+ S R RAVAQYL++QS TP+SE S LSLN IL+ K+RK+CARMFFETLVLK+YGL
Sbjct: 652 ESLSVRTRAVAQYLQRQSPITPSSEGSTD-LSLNKILQGKTRKLCARMFFETLVLKSYGL 710
Query: 1690 VDAHQEEPYGDIKLRVTPKLWK 1625
+D QE+PYGDI L++TPKL K
Sbjct: 711 LDVEQEQPYGDITLKLTPKLSK 732
>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
Length = 677
Score = 102 bits (255), Expect = 5e-19
Identities = 54/97 (55%), Positives = 67/97 (69%)
Frame = -3
Query: 1915 ESGSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVC 1736
E G+ + +G+ S R RAVA+YL+KQS TP SE LSLN ILE K+RK+C
Sbjct: 578 EDGNTPTESQGSQGVGSLSVRTRAVAKYLKKQSPITPISEDLHRDLSLNKILEGKTRKIC 637
Query: 1735 ARMFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKLWK 1625
ARMFFETLVLK+YGLVD Q++ GDI L++TP L K
Sbjct: 638 ARMFFETLVLKSYGLVDVRQDDANGDITLKLTPTLSK 674
>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 100 bits (250), Expect = 2e-18
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = -3
Query: 1846 AVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLVLKNYGLVDAHQEEP 1667
AVAQYL+ S P SE LSLN ILE K+RK+ ARMFFETLVLKNYGLVD QEEP
Sbjct: 633 AVAQYLQNHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEP 692
Query: 1666 YGDIKLRVTPKLWKEQF 1616
YGDI L++TPKL K +F
Sbjct: 693 YGDITLKMTPKLSKARF 709
>ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, partial [Citrus clementina]
gi|557541259|gb|ESR52303.1| hypothetical protein
CICLE_v100309242mg, partial [Citrus clementina]
Length = 123
Score = 100 bits (249), Expect = 2e-18
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = -3
Query: 1846 AVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLVLKNYGLVDAHQEEP 1667
AVAQYL++QS TP+SE S LSLN IL+ K+RK+CARMFFETLVLK+YGL+D QE+P
Sbjct: 48 AVAQYLQRQSPITPSSEGSTD-LSLNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQP 106
Query: 1666 YGDIKLRVTPKLWK 1625
YGDI L++TPKL K
Sbjct: 107 YGDITLKLTPKLSK 120
>gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus notabilis]
Length = 712
Score = 100 bits (248), Expect = 3e-18
Identities = 52/90 (57%), Positives = 65/90 (72%)
Frame = -3
Query: 1888 RGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLV 1709
+GT S R RAVAQYL++QSS TP +E + LSLN +L+ K+R +CARMFF TLV
Sbjct: 622 QGTPGVGSLSVRTRAVAQYLKRQSSITPITENASEDLSLNKLLKGKTRTLCARMFFGTLV 681
Query: 1708 LKNYGLVDAHQEEPYGDIKLRVTPKLWKEQ 1619
LK+ GLVD +EEPYGDI L++TP L K Q
Sbjct: 682 LKSNGLVDVVEEEPYGDITLKLTPALLKAQ 711
>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 96.7 bits (239), Expect = 3e-17
Identities = 51/95 (53%), Positives = 62/95 (65%)
Frame = -3
Query: 1915 ESGSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVC 1736
E S +GT D S R RA+ +YLR S S+ S LSLN ILE K RK+C
Sbjct: 809 EVDSSPAGSQGTRGVDSLSVRTRALGRYLRSLSPIKSISDNSNQDLSLNGILEGKRRKLC 868
Query: 1735 ARMFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKL 1631
ARMF+ETLVLK+YGL+D Q+ PYGDI L++TPKL
Sbjct: 869 ARMFYETLVLKSYGLIDVQQDVPYGDITLKLTPKL 903
>ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Fragaria vesca
subsp. vesca]
Length = 736
Score = 96.3 bits (238), Expect = 4e-17
Identities = 52/88 (59%), Positives = 61/88 (69%)
Frame = -3
Query: 1888 RGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLV 1709
+GT D S R RAVAQYL+ QS E +S+ LSLN ILE K RK+CARMFFETLV
Sbjct: 653 QGTEGVDSLSVRTRAVAQYLKSQSPEDLSSD-----LSLNKILEGKRRKLCARMFFETLV 707
Query: 1708 LKNYGLVDAHQEEPYGDIKLRVTPKLWK 1625
LK+Y L+D QE PYGDI L++T L K
Sbjct: 708 LKSYDLIDVKQEVPYGDISLKLTQTLSK 735
>ref|XP_006289685.1| hypothetical protein CARUB_v10003242mg [Capsella rubella]
gi|482558391|gb|EOA22583.1| hypothetical protein
CARUB_v10003242mg [Capsella rubella]
Length = 732
Score = 94.4 bits (233), Expect = 2e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = -3
Query: 1909 GSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCAR 1730
G+ + T +FD S R RAVA+Y+ ++SS +PNS LSL+ ILE K+RK+ AR
Sbjct: 634 GNTPVRSPSTQDFDGLSGRTRAVAEYITERSSSSPNSSHPSEDLSLSKILEGKTRKIAAR 693
Query: 1729 MFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKL 1631
MF+ETLVLK+ GL+D Q++PY DI L++ P L
Sbjct: 694 MFYETLVLKSRGLIDMKQDQPYSDITLKLMPAL 726
>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
Length = 696
Score = 92.0 bits (227), Expect = 8e-16
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = -3
Query: 1870 DDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLVLKNYGL 1691
D + R RA+AQYLR++SS +P S G LSL+ IL K+RK+ ARMFFETLVLK+ GL
Sbjct: 611 DALTGRARALAQYLRQRSSSSPTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLKSRGL 670
Query: 1690 VDAHQEEPYGDIKLRVTPKLWKE 1622
+D Q+ PYGDI L++ P L+ +
Sbjct: 671 IDMQQDRPYGDIALKLMPALFSK 693
>ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Capsella rubella]
gi|482558971|gb|EOA23162.1| hypothetical protein
CARUB_v10016763mg [Capsella rubella]
Length = 702
Score = 91.3 bits (225), Expect = 1e-15
Identities = 45/96 (46%), Positives = 64/96 (66%)
Frame = -3
Query: 1909 GSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCAR 1730
GS + + + D + R RA+ QYL+ +SS +P S G LSL+ IL K+RK+ AR
Sbjct: 604 GSTPSRSPASQDSDGLTGRTRALVQYLKLRSSHSPTSSHPSGDLSLSDILAGKTRKLAAR 663
Query: 1729 MFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKLWKE 1622
MFFETLVLK+ GL+D Q++PYGDI L++ P L+ +
Sbjct: 664 MFFETLVLKSRGLIDMQQDKPYGDIGLKLMPALFSK 699
>ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arabidopsis lyrata subsp.
lyrata] gi|297318587|gb|EFH49009.1| hypothetical protein
ARALYDRAFT_911799 [Arabidopsis lyrata subsp. lyrata]
Length = 653
Score = 89.7 bits (221), Expect = 4e-15
Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = -3
Query: 1915 ESGSMTRKQRGTTEFDD-FSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKV 1739
E G ++ + T++ D R R VAQYL+++ S + S + G LSLN ILE K+RK+
Sbjct: 552 EDGGNSQVRSPATQYSDALPGRTRTVAQYLKERCSSSLTSSHASGDLSLNKILEGKTRKI 611
Query: 1738 CARMFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKLWKE 1622
ARMF+ETLVLK+ GL+D Q++PY DI L++ P L+ +
Sbjct: 612 AARMFYETLVLKSRGLIDMKQDQPYSDISLKLMPALFSK 650
>ref|XP_006402677.1| hypothetical protein EUTSA_v10005819mg [Eutrema salsugineum]
gi|557103776|gb|ESQ44130.1| hypothetical protein
EUTSA_v10005819mg [Eutrema salsugineum]
Length = 689
Score = 88.6 bits (218), Expect = 9e-15
Identities = 43/96 (44%), Positives = 67/96 (69%)
Frame = -3
Query: 1909 GSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCAR 1730
G+ + + + D + R RA+AQ+L+++SS +P+S S G LSL+ IL K+RK+ AR
Sbjct: 593 GNTPLRSPDSQDSDALTGRTRALAQFLKERSSGSPSSRYSSGDLSLSKILAGKTRKLAAR 652
Query: 1729 MFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKLWKE 1622
MFFETLVLK+ GL++ Q++PYGDI L + P ++ +
Sbjct: 653 MFFETLVLKSRGLINVQQDQPYGDIALTLMPAIFSK 688
>ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
gi|355487106|gb|AES68309.1| Sister chromatid cohesion 1
protein [Medicago truncatula]
Length = 737
Score = 87.0 bits (214), Expect = 3e-14
Identities = 48/99 (48%), Positives = 59/99 (59%)
Frame = -3
Query: 1921 TPESGSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRK 1742
TP + S Q + D S R R +AQYL+ S T EQ SLN IL+ K+RK
Sbjct: 639 TPATAS---SQSTSRSIDTLSGRTRGLAQYLKDYSPCTTIPEQPAEDFSLNKILDGKTRK 695
Query: 1741 VCARMFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKLWK 1625
+ ARMFFE LVLK + L+D QEEPYGDI ++TP L K
Sbjct: 696 IAARMFFEVLVLKTHDLIDVQQEEPYGDISFKLTPALDK 734
>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
Length = 692
Score = 85.1 bits (209), Expect = 1e-13
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Frame = -3
Query: 1885 GTTEFDDFSA---RMRAVAQYLRKQSSETPN-SEQSLGYLSLNSILENKSRKVCARMFFE 1718
GT D +A R RA+AQYL+++SS +P S G LSL+ IL K+RK+ ARMFFE
Sbjct: 598 GTPASQDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFE 657
Query: 1717 TLVLKNYGLVDAHQEEPYGDIKLRVTPKLWKE 1622
TLVLK+ GL+D Q+ PYGDI L++ P L+ +
Sbjct: 658 TLVLKSRGLIDMQQDRPYGDIALKLMPALFSK 689
>ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
gi|30913284|sp|Q9FQ19.2|SCC13_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 3; AltName: Full=SCC1
homolog 3; Short=AtRAD21-2
gi|18157647|gb|AAL62059.1|AF400128_1 RAD21-2 [Arabidopsis
thaliana] gi|6996291|emb|CAB75452.1| putative protein
[Arabidopsis thaliana] gi|332646418|gb|AEE79939.1| sister
chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
Length = 693
Score = 85.1 bits (209), Expect = 1e-13
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Frame = -3
Query: 1885 GTTEFDDFSA---RMRAVAQYLRKQSSETPN-SEQSLGYLSLNSILENKSRKVCARMFFE 1718
GT D +A R RA+AQYL+++SS +P S G LSL+ IL K+RK+ ARMFFE
Sbjct: 599 GTPASQDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFE 658
Query: 1717 TLVLKNYGLVDAHQEEPYGDIKLRVTPKLWKE 1622
TLVLK+ GL+D Q+ PYGDI L++ P L+ +
Sbjct: 659 TLVLKSRGLIDMQQDRPYGDIALKLMPALFSK 690
>ref|XP_003571593.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Brachypodium
distachyon]
Length = 677
Score = 84.7 bits (208), Expect = 1e-13
Identities = 45/85 (52%), Positives = 54/85 (63%)
Frame = -3
Query: 1885 GTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCARMFFETLVL 1706
G T SAR RAVAQY + + S +++Q G SLNSILE + RK ARMFFETL L
Sbjct: 589 GATGLGSMSARTRAVAQYFKDKMSSATSNDQP-GKFSLNSILEGRRRKQAARMFFETLAL 647
Query: 1705 KNYGLVDAHQEEPYGDIKLRVTPKL 1631
K+Y +D QEE Y DIK+ V P L
Sbjct: 648 KSYDYIDVQQEEAYSDIKISVRPSL 672
>ref|XP_006659986.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Oryza
brachyantha]
Length = 733
Score = 84.3 bits (207), Expect = 2e-13
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = -3
Query: 1909 GSMTRKQRGTTEFDDFSARMRAVAQYLRKQSSETPNSEQSLGYLSLNSILENKSRKVCAR 1730
G ++ GTT SAR RAVAQY + + + +Q G SLN ILE ++RK AR
Sbjct: 637 GVISTAGTGTTGLGSMSARTRAVAQYFKDHMASATSDDQP-GKFSLNKILEGRARKQAAR 695
Query: 1729 MFFETLVLKNYGLVDAHQEEPYGDIKLRVTPKL 1631
MFFETLVLK+Y +D Q+E YGDI + V P L
Sbjct: 696 MFFETLVLKSYDYIDVQQDEAYGDIAVSVKPSL 728