BLASTX nr result
ID: Catharanthus22_contig00024563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00024563
(330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein... 105 5e-21
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis] 103 2e-20
ref|XP_002308737.1| pentatricopeptide repeat-containing family p... 102 7e-20
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi... 101 9e-20
ref|XP_006449977.1| hypothetical protein CICLE_v100176692mg, par... 101 9e-20
emb|CBI18780.3| unnamed protein product [Vitis vinifera] 100 2e-19
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
emb|CAJ19324.1| selenium binding protein [Triticum aestivum] 100 3e-19
emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum] 100 3e-19
gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indi... 100 3e-19
gb|EMT26564.1| hypothetical protein F775_03208 [Aegilops tauschii] 99 5e-19
gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japo... 99 6e-19
ref|XP_004959556.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [S... 99 8e-19
tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea m... 98 1e-18
ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea ma... 98 1e-18
gb|EMJ15418.1| hypothetical protein PRUPE_ppa023254mg [Prunus pe... 97 2e-18
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
>ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Solanum tuberosum]
Length = 654
Score = 109 bits (272), Expect = 4e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GS IRIKKNIRVCGDCHTAFKFVS+VVDREIILRDTNRFHHF GSCSCGDYW
Sbjct: 602 GSPIRIKKNIRVCGDCHTAFKFVSKVVDREIILRDTNRFHHFRNGSCSCGDYW 654
>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Solanum lycopersicum]
Length = 653
Score = 109 bits (272), Expect = 4e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GS IRIKKNIRVCGDCHTAFKFVS+VVDREIILRDTNRFHHF GSCSCGDYW
Sbjct: 601 GSPIRIKKNIRVCGDCHTAFKFVSKVVDREIILRDTNRFHHFRNGSCSCGDYW 653
>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508781793|gb|EOY29049.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 675
Score = 105 bits (263), Expect = 5e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTIRIKKNIRVCGDCH+A KFVSQVV REII+RDTNRFHHF GSCSCGDYW
Sbjct: 623 GSTIRIKKNIRVCGDCHSAIKFVSQVVRREIIVRDTNRFHHFRGGSCSCGDYW 675
>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
Length = 750
Score = 103 bits (257), Expect = 2e-20
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTIRIKKNIRVCGDCH+A K+VS+VV REII+RDTNRFHHF GSCSCGDYW
Sbjct: 698 GSTIRIKKNIRVCGDCHSAIKYVSKVVGREIIVRDTNRFHHFHNGSCSCGDYW 750
>ref|XP_002308737.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222854713|gb|EEE92260.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 590
Score = 102 bits (253), Expect = 7e-20
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTIRIKKNIR+CGDCH+AFKFVS++V+REII+RDTNRFHHF G+CSC DYW
Sbjct: 538 GSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Citrus sinensis]
Length = 670
Score = 101 bits (252), Expect = 9e-20
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTI IKKNIRVCGDCH+AFKF S+VV+REII+RDTNRFHHF G CSCGDYW
Sbjct: 618 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 670
>ref|XP_006449977.1| hypothetical protein CICLE_v100176692mg, partial [Citrus
clementina] gi|557552588|gb|ESR63217.1| hypothetical
protein CICLE_v100176692mg, partial [Citrus clementina]
Length = 206
Score = 101 bits (252), Expect = 9e-20
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTI IKKNIRVCGDCH+AFKF S+VV+REII+RDTNRFHHF G CSCGDYW
Sbjct: 154 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 206
>emb|CBI18780.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 100 bits (250), Expect = 2e-19
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GS IRIKKNIRVCGDCH A KFVS+VVDREII+RDTNRFH F GSCSCGDYW
Sbjct: 237 GSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGSCSCGDYW 289
>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 650
Score = 100 bits (248), Expect = 3e-19
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTIRIKKNIRVCGDCH+A K+VS+V REII+RDTNRFHHF GSCSCGDYW
Sbjct: 598 GSTIRIKKNIRVCGDCHSAIKYVSKVERREIIVRDTNRFHHFRDGSCSCGDYW 650
>emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 100 bits (248), Expect = 3e-19
Identities = 40/53 (75%), Positives = 49/53 (92%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+TIRI KNIR+CGDCH+AFK++S+V REI++RDTNRFHHF +GSCSCGDYW
Sbjct: 572 GATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
>emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 100 bits (248), Expect = 3e-19
Identities = 40/53 (75%), Positives = 49/53 (92%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+TIRI KNIR+CGDCH+AFK++S+V +REI++RDTNRFHHF GSCSCGDYW
Sbjct: 572 GATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
>gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 100 bits (248), Expect = 3e-19
Identities = 39/53 (73%), Positives = 50/53 (94%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+TIRI KNIR+CGDCH+AF+++S+V +REI++RDTNRFHHF +GSCSCGDYW
Sbjct: 461 GATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
>gb|EMT26564.1| hypothetical protein F775_03208 [Aegilops tauschii]
Length = 128
Score = 99.4 bits (246), Expect = 5e-19
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+TIRI KNIR+CGDCH+AFK+VS+V REI++RDTNRFHHF GSCSCGDYW
Sbjct: 76 GATIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSNGSCSCGDYW 128
>gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 99.0 bits (245), Expect = 6e-19
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+TIRI KNIR+CGDCH+AF+++S+V REI++RDTNRFHHF +GSCSCGDYW
Sbjct: 585 GATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
>ref|XP_004959556.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Setaria italica]
Length = 628
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+ IRI KNIR+CGDCH+AFK+VS+V +REII+RDTNRFHHF GSCSCGDYW
Sbjct: 576 GAMIRIMKNIRICGDCHSAFKYVSKVFEREIIVRDTNRFHHFSNGSCSCGDYW 628
>ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein
SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 98.6 bits (244), Expect = 8e-19
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G+TIRI KNIR+CGDCH+AF++VS+V REI++RDTNRFHHF GSCSCGDYW
Sbjct: 583 GATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
>tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 98.2 bits (243), Expect = 1e-18
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G++IRI KNIR+CGDCH+AFK+VS+V REI++RDTNRFHHF GSCSCGDYW
Sbjct: 581 GASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
>ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 98.2 bits (243), Expect = 1e-18
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
G++IRI KNIR+CGDCH+AFK+VS+V REI++RDTNRFHHF GSCSCGDYW
Sbjct: 478 GASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
>gb|EMJ15418.1| hypothetical protein PRUPE_ppa023254mg [Prunus persica]
Length = 563
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTIRIKKNIRVCGDCH+A K+VS+V REII+RDTNRFHHF GSCSC DYW
Sbjct: 511 GSTIRIKKNIRVCGDCHSAIKYVSKVEGREIIVRDTNRFHHFRNGSCSCRDYW 563
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = -3
Query: 328 GSTIRIKKNIRVCGDCHTAFKFVSQVVDREIILRDTNRFHHFFAGSCSCGDYW 170
GSTIRI KNIRVCGDCH+A K+VS VV REII+RDTNRFHHF G CSCGDYW
Sbjct: 595 GSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647