BLASTX nr result

ID: Catharanthus22_contig00024405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00024405
         (1053 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83924.1| hypothetical protein VITISV_026535 [Vitis vinifera]    65   4e-08
emb|CAN67397.1| hypothetical protein VITISV_022672 [Vitis vinifera]    61   8e-07

>emb|CAN83924.1| hypothetical protein VITISV_026535 [Vitis vinifera]
          Length = 137

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 50/116 (43%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
 Frame = +1

Query: 28  MAGGVAQKLLEKLPNQRILTIFSNRNPLVPLVTPPILQ-----QSKSENQNLLINPDSGC 192
           MA  V QKLL K   QRIL   +N      LV PP+L      ++KS+ +  L NP  G 
Sbjct: 1   MAAAV-QKLLRKPSYQRILPCLNNGKSS-NLVAPPLLHKPYPPETKSDAEPNL-NPCQGS 57

Query: 193 STVAESIPRHAFQFYPSFSFEYFLNPVSPCGFCHSQSLK----ESDESRIMWADSV 348
           ST        +FQ YPSF F Y LNP+       SQ LK    +SD+SR +WADSV
Sbjct: 58  STTENHTHYSSFQIYPSFPFGYCLNPIPSPVLEQSQPLKVEEVDSDDSRTIWADSV 113


>emb|CAN67397.1| hypothetical protein VITISV_022672 [Vitis vinifera]
          Length = 137

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
 Frame = +1

Query: 28  MAGGVAQKLLEKLPNQRILTIFSN--RNPLV--PLVTPPILQQSKSENQNLLINPDSGCS 195
           MA  V +KLL K   QRIL   +N   + LV  PL+  P L ++K + +  L NP  G S
Sbjct: 1   MAAAV-RKLLRKPSYQRILPCLNNGKSSNLVAPPLLHKPYLPETKFDAEPNL-NPCQGSS 58

Query: 196 TVAESIPRHAFQFYPSFSFEYFLNPVSPCGFCHSQSLK----ESDESRIMWADSV 348
           T        +FQ YPSF F Y LNP+       SQ  K    +SD+SR +WADSV
Sbjct: 59  TTENHTHYSSFQIYPSFPFGYCLNPIPSPVLEQSQPSKVEEVDSDDSRTIWADSV 113


Top