BLASTX nr result
ID: Catharanthus22_contig00024280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00024280
(203 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF26765.1|AC007396_14 T4O12.25 [Arabidopsis thaliana] 105 6e-21
ref|NP_177732.2| RNA pseudourine synthase 2 [Arabidopsis thalian... 105 6e-21
dbj|BAC42428.1| putative RNA pseudouridylate synthase [Arabidops... 105 6e-21
ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thalian... 105 6e-21
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr... 105 8e-21
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [... 102 5e-20
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps... 102 7e-20
gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [... 100 2e-19
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 100 2e-19
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr... 100 2e-19
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr... 100 2e-19
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 100 3e-19
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 100 3e-19
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis] 99 6e-19
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 98 1e-18
ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 97 2e-18
gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus... 96 6e-18
gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus... 96 6e-18
ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl... 95 1e-17
gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea] 95 1e-17
>gb|AAF26765.1|AC007396_14 T4O12.25 [Arabidopsis thaliana]
Length = 980
Score = 105 bits (262), Expect = 6e-21
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HLA QFK H+I+RVY+SLT GVPSP GR+EIPIGRD +NRIRMAAIPG ++G
Sbjct: 796 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGG 855
Query: 182 NARQAAS 202
AR AAS
Sbjct: 856 RARHAAS 862
>ref|NP_177732.2| RNA pseudourine synthase 2 [Arabidopsis thaliana]
gi|332197668|gb|AEE35789.1| RNA pseudourine synthase 2
[Arabidopsis thaliana]
Length = 313
Score = 105 bits (262), Expect = 6e-21
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HLA QFK H+I+RVY+SLT GVPSP GR+EIPIGRD +NRIRMAAIPG ++G
Sbjct: 246 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGG 305
Query: 182 NARQAAS 202
AR AAS
Sbjct: 306 RARHAAS 312
>dbj|BAC42428.1| putative RNA pseudouridylate synthase [Arabidopsis thaliana]
Length = 148
Score = 105 bits (262), Expect = 6e-21
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HLA QFK H+I+RVY+SLT GVPSP GR+EIPIGRD +NRIRMAAIPG ++G
Sbjct: 81 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGG 140
Query: 182 NARQAAS 202
AR AAS
Sbjct: 141 RARHAAS 147
>ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thaliana]
gi|122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA
pseudouridine synthase 2, chloroplastic; AltName:
Full=RNA pseudouridylate synthase 2; AltName:
Full=RNA-uridine isomerase 2; Flags: Precursor
gi|332197669|gb|AEE35790.1| RNA pseudourine synthase 2
[Arabidopsis thaliana]
Length = 430
Score = 105 bits (262), Expect = 6e-21
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HLA QFK H+I+RVY+SLT GVPSP GR+EIPIGRD +NRIRMAAIPG ++G
Sbjct: 246 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGG 305
Query: 182 NARQAAS 202
AR AAS
Sbjct: 306 RARHAAS 312
>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
gi|557086678|gb|ESQ27530.1| hypothetical protein
EUTSA_v10018588mg [Eutrema salsugineum]
Length = 432
Score = 105 bits (261), Expect = 8e-21
Identities = 51/67 (76%), Positives = 57/67 (85%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HLA QFK H+I+RVYISLT GVPSP+ GRV+IPIGRD NNRIRMAAIPGS+
Sbjct: 244 DEHSHAHLAEQFKLHTIERVYISLTSGVPSPSQGRVDIPIGRDPNNRIRMAAIPGSLSRG 303
Query: 182 NARQAAS 202
AR AAS
Sbjct: 304 KARHAAS 310
>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 399
Score = 102 bits (254), Expect = 5e-20
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEH+H+HL+ QFK+H+I+RVYISLT GVPS +GR++IPIGRDVNNRIRM AIPG IK
Sbjct: 233 DEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMTAIPGPIKQG 292
Query: 182 NARQAAS 202
AR AAS
Sbjct: 293 RARHAAS 299
>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
gi|482570987|gb|EOA35175.1| hypothetical protein
CARUB_v10020321mg [Capsella rubella]
Length = 432
Score = 102 bits (253), Expect = 7e-20
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HLA QFK H+I+RVY+SLT GVPSP GR+EIPIGRD +NRIRMAAIPG +
Sbjct: 244 DEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGLSSG 303
Query: 182 NARQAAS 202
AR AAS
Sbjct: 304 RARHAAS 310
>gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
Length = 433
Score = 100 bits (250), Expect = 2e-19
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSHSHL+ QFK+H+I+RVYISLTCGVPSP++GRV+I IGRD NNR+RM A+PG
Sbjct: 242 DEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMIAVPGLNHHG 301
Query: 182 NARQAAS 202
AR AAS
Sbjct: 302 RARHAAS 308
>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
sinensis]
Length = 421
Score = 100 bits (249), Expect = 2e-19
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK H+I+RVYISLT GVPS +SGR+E+PI RD NNRIRMAAIPGS K
Sbjct: 231 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSNKHG 290
Query: 182 NARQAAS 202
AR AAS
Sbjct: 291 QARHAAS 297
>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
gi|557537377|gb|ESR48495.1| hypothetical protein
CICLE_v10001736mg [Citrus clementina]
Length = 341
Score = 100 bits (249), Expect = 2e-19
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK H+I+RVYISLT GVPS +SGR+E+PI RD NNRIRMAAIPGS K
Sbjct: 231 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSNKHG 290
Query: 182 NARQAAS 202
AR AAS
Sbjct: 291 QARHAAS 297
>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
gi|557537376|gb|ESR48494.1| hypothetical protein
CICLE_v10001736mg [Citrus clementina]
Length = 324
Score = 100 bits (249), Expect = 2e-19
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK H+I+RVYISLT GVPS +SGR+E+PI RD NNRIRMAAIPGS K
Sbjct: 231 DEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSNKHG 290
Query: 182 NARQAAS 202
AR AAS
Sbjct: 291 QARHAAS 297
>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 100 bits (248), Expect = 3e-19
Identities = 48/67 (71%), Positives = 53/67 (79%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK HSI RVYISLT GVP+P SGRVEIP+GRD NNRIRM A+PG
Sbjct: 241 DEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSG 300
Query: 182 NARQAAS 202
AR AAS
Sbjct: 301 QARHAAS 307
>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
Length = 611
Score = 100 bits (248), Expect = 3e-19
Identities = 48/67 (71%), Positives = 53/67 (79%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK HSI RVYISLT GVP+P SGRVEIP+GRD NNRIRM A+PG
Sbjct: 387 DEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSG 446
Query: 182 NARQAAS 202
AR AAS
Sbjct: 447 QARHAAS 453
>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
Length = 369
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK H+I RVY+SLT GVPS SG +E+PIGRD NNRIRMAAIPG+ +
Sbjct: 255 DEHSHAHLSEQFKLHTIHRVYVSLTSGVPSQLSGHIEVPIGRDPNNRIRMAAIPGATNSK 314
Query: 182 NARQAAS 202
AR AAS
Sbjct: 315 RARHAAS 321
>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
sativus]
Length = 453
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/67 (68%), Positives = 56/67 (83%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+AQFK+HSI+RVYISLTCGVP T+GR+E+PI RD NNRIRM AI G+
Sbjct: 240 DEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNP 299
Query: 182 NARQAAS 202
+A+ AAS
Sbjct: 300 HAKYAAS 306
>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
gi|222843675|gb|EEE81222.1| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 444
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/67 (68%), Positives = 58/67 (86%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+HL+ QFK H+IKRVY+SLTCGVP+P +GR+++PIGRDV+NRIRMAAI +G+
Sbjct: 254 DEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIVEPNRGQ 313
Query: 182 NARQAAS 202
AR AAS
Sbjct: 314 -ARHAAS 319
>gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
Length = 447
Score = 95.5 bits (236), Expect = 6e-18
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH L+ QFK+ +IKRVY+SLT GVP P SGRV++P+GRD+NNR+RM A+ G + R
Sbjct: 252 DEHSHMKLSEQFKQRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSR 311
Query: 182 NARQAAS 202
AR AAS
Sbjct: 312 KARHAAS 318
>gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
Length = 458
Score = 95.5 bits (236), Expect = 6e-18
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH L+ QFK+ +IKRVY+SLT GVP P SGRV++P+GRD+NNR+RM A+ G + R
Sbjct: 263 DEHSHMKLSEQFKQRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSR 322
Query: 182 NARQAAS 202
AR AAS
Sbjct: 323 KARHAAS 329
>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
brachyantha]
Length = 442
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DEHSH+ LA QFK H+I+RVYISLTCG P+P SGR+E+PI RD NNRIRM A PGS R
Sbjct: 245 DEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPGS-GHR 303
Query: 182 NARQAAS 202
AR AAS
Sbjct: 304 YARHAAS 310
>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
Length = 1063
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/67 (61%), Positives = 55/67 (82%)
Frame = +2
Query: 2 DEHSHSHLAAQFKEHSIKRVYISLTCGVPSPTSGRVEIPIGRDVNNRIRMAAIPGSIKGR 181
DE+SHSHLA QF++H++KR+Y+S++CGVPSP++G +++PIGRD NNRIRM IPGS
Sbjct: 243 DEYSHSHLAEQFQKHTVKRLYMSISCGVPSPSTGCIDVPIGRDPNNRIRMVGIPGSSSRG 302
Query: 182 NARQAAS 202
AR A S
Sbjct: 303 KARHAVS 309