BLASTX nr result
ID: Catharanthus22_contig00024270
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00024270 (338 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006376461.1| hypothetical protein POPTR_0013s132502g, par... 54 3e-07 ref|XP_006376462.1| hypothetical protein POPTR_0013s132502g, par... 54 3e-07 emb|CBI24131.3| unnamed protein product [Vitis vinifera] 50 4e-07 ref|XP_006590810.1| PREDICTED: general transcription factor 3C p... 49 1e-05 >ref|XP_006376461.1| hypothetical protein POPTR_0013s132502g, partial [Populus trichocarpa] gi|550325737|gb|ERP54258.1| hypothetical protein POPTR_0013s132502g, partial [Populus trichocarpa] Length = 688 Score = 53.5 bits (127), Expect(2) = 3e-07 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%) Frame = -2 Query: 313 NIFCGLRPLASKSDLLNAYRARKLLEKKAILKG---TLGVDSGSDYSDDE 173 ++F +RPLASKSDLL A RARKLL+KK K G+D SDYSDDE Sbjct: 345 DVFGEVRPLASKSDLLRACRARKLLQKKEEQKAADKAAGIDLPSDYSDDE 394 Score = 26.6 bits (57), Expect(2) = 3e-07 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 60 KVHPLPSFLKNVEHHVLIVD 1 +V PL FLK+ HH LI+D Sbjct: 400 RVSPLHDFLKDEAHHDLIID 419 >ref|XP_006376462.1| hypothetical protein POPTR_0013s132502g, partial [Populus trichocarpa] gi|550325738|gb|ERP54259.1| hypothetical protein POPTR_0013s132502g, partial [Populus trichocarpa] Length = 500 Score = 53.5 bits (127), Expect(2) = 3e-07 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%) Frame = -2 Query: 313 NIFCGLRPLASKSDLLNAYRARKLLEKKAILKG---TLGVDSGSDYSDDE 173 ++F +RPLASKSDLL A RARKLL+KK K G+D SDYSDDE Sbjct: 345 DVFGEVRPLASKSDLLRACRARKLLQKKEEQKAADKAAGIDLPSDYSDDE 394 Score = 26.6 bits (57), Expect(2) = 3e-07 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 60 KVHPLPSFLKNVEHHVLIVD 1 +V PL FLK+ HH LI+D Sbjct: 400 RVSPLHDFLKDEAHHDLIID 419 >emb|CBI24131.3| unnamed protein product [Vitis vinifera] Length = 915 Score = 50.1 bits (118), Expect(2) = 4e-07 Identities = 30/56 (53%), Positives = 34/56 (60%), Gaps = 7/56 (12%) Frame = -2 Query: 313 NIFCGLRPLASKSDLLNAYRARKLLEKKAILKG-------TLGVDSGSDYSDDEFP 167 N+F G RP+AS SDL A RA+KLL+KKA K GVD SD SDDE P Sbjct: 566 NVFHGFRPMASTSDLSKASRAKKLLQKKATRKEERKAAAMAAGVDWYSDESDDESP 621 Score = 29.3 bits (64), Expect(2) = 4e-07 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -3 Query: 72 QQNAKVHPLPSFLKNVEHHVLIVD 1 +Q + PLP+ LK+ EHH LI+D Sbjct: 622 EQKLREPPLPNLLKDEEHHHLILD 645 >ref|XP_006590810.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Glycine max] Length = 914 Score = 48.9 bits (115), Expect(2) = 1e-05 Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 7/54 (12%) Frame = -2 Query: 313 NIFCGLRPLASKSDLLNAYRARKLLEKKAILKG-------TLGVDSGSDYSDDE 173 N+F G RP+A+ SDLL A RA+KLL+KKAI K G+D SD SDDE Sbjct: 566 NVFRGFRPVAAPSDLLKASRAKKLLQKKAIEKEKRKAEALASGIDWLSDDSDDE 619 Score = 25.8 bits (55), Expect(2) = 1e-05 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 Query: 72 QQNAKVHPLPSFLKNVEHHVLIVD 1 Q+ + PL + LK+ EHH LI+D Sbjct: 621 QKENREPPLCNLLKDEEHHQLIID 644