BLASTX nr result
ID: Catharanthus22_contig00024083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00024083
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237378.1| PREDICTED: DNA repair and recombination prot... 100 2e-19
ref|XP_006350409.1| PREDICTED: DNA repair and recombination prot... 100 2e-19
ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citr... 100 3e-19
ref|XP_006487098.1| PREDICTED: DNA repair and recombination prot... 98 1e-18
gb|EXC17352.1| DNA repair protein rhp54 [Morus notabilis] 96 4e-18
ref|XP_006384415.1| hypothetical protein POPTR_0004s14870g [Popu... 94 1e-17
gb|EMJ01940.1| hypothetical protein PRUPE_ppa024484mg [Prunus pe... 92 5e-17
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera] 92 9e-17
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot... 91 1e-16
dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa ... 91 1e-16
ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group] g... 91 1e-16
gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japo... 91 1e-16
gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indi... 91 1e-16
sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombinati... 91 1e-16
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot... 91 2e-16
emb|CBI32424.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_004954012.1| PREDICTED: DNA repair and recombination prot... 90 3e-16
ref|XP_003573054.1| PREDICTED: DNA repair and recombination prot... 90 3e-16
ref|XP_006647954.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair a... 89 6e-16
gb|EPS60250.1| hypothetical protein M569_14554, partial [Genlise... 88 1e-15
>ref|XP_004237378.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
lycopersicum]
Length = 956
Score = 100 bits (250), Expect = 2e-19
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = +3
Query: 246 SSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYR 425
+S ++S EDRK QNVDALVRG+L+VKRQS+LPRVYSVTDAA LRKPFKPP S+GY
Sbjct: 42 ASQTGTSSPDEDRKSQNVDALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYS 101
Query: 426 NNNEQLARRL 455
++NE LARRL
Sbjct: 102 SSNEHLARRL 111
>ref|XP_006350409.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
tuberosum]
Length = 952
Score = 100 bits (249), Expect = 2e-19
Identities = 49/65 (75%), Positives = 57/65 (87%)
Frame = +3
Query: 261 SASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQ 440
++S EDRK QNVDALVRG+L+VKRQS+LPRVYSVTDAA LRKPFKPP S+GY ++NE
Sbjct: 45 TSSPDEDRKSQNVDALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYSSSNEH 104
Query: 441 LARRL 455
LARRL
Sbjct: 105 LARRL 109
>ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citrus clementina]
gi|557524966|gb|ESR36272.1| hypothetical protein
CICLE_v10027772mg [Citrus clementina]
Length = 930
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/70 (70%), Positives = 57/70 (81%)
Frame = +3
Query: 246 SSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYR 425
+S+ SA EDRK +NVDALVRG+LVVKRQS+LPRV SVT+ A RKPFKPPCS+GY
Sbjct: 40 ASVADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYD 99
Query: 426 NNNEQLARRL 455
N N+QLARRL
Sbjct: 100 NGNDQLARRL 109
>ref|XP_006487098.1| PREDICTED: DNA repair and recombination protein RAD54-like [Citrus
sinensis]
Length = 930
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +3
Query: 246 SSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYR 425
+S SA EDRK +NVDALVRG+LVVKRQS+LPRV SVT+ A RKPFKPPCS+GY
Sbjct: 40 ASAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYD 99
Query: 426 NNNEQLARRL 455
N N+QLARRL
Sbjct: 100 NGNDQLARRL 109
>gb|EXC17352.1| DNA repair protein rhp54 [Morus notabilis]
Length = 941
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +3
Query: 276 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLARRL 455
EDRK NVDALVRG+LVVKRQS+LPRV SVT+ + RKPFKPPCSDGY + N++LARRL
Sbjct: 116 EDRKSTNVDALVRGNLVVKRQSLLPRVLSVTEGSAVCRKPFKPPCSDGYSSQNDELARRL 175
Query: 456 W 458
W
Sbjct: 176 W 176
>ref|XP_006384415.1| hypothetical protein POPTR_0004s14870g [Populus trichocarpa]
gi|550341033|gb|ERP62212.1| hypothetical protein
POPTR_0004s14870g [Populus trichocarpa]
Length = 932
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/61 (72%), Positives = 52/61 (85%)
Frame = +3
Query: 276 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLARRL 455
EDRK +NVD L+RG+LVV+RQS+LPRV SVT+ A RKPFKPPCS+GY + NEQLARRL
Sbjct: 49 EDRKSKNVDDLLRGNLVVRRQSLLPRVLSVTEGAAICRKPFKPPCSNGYNDGNEQLARRL 108
Query: 456 W 458
W
Sbjct: 109 W 109
>gb|EMJ01940.1| hypothetical protein PRUPE_ppa024484mg [Prunus persica]
Length = 872
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +3
Query: 243 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 422
R S+ ED+K +NVDALVRG+LVVKRQS+LPRV SVT+ A RKPFKPPCS+GY
Sbjct: 45 RKSMDPPRPSGEDQKSKNVDALVRGNLVVKRQSLLPRVLSVTEGATVCRKPFKPPCSNGY 104
Query: 423 RNNNEQLARRLW 458
+ N+QLARRL+
Sbjct: 105 DDGNDQLARRLY 116
>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = +3
Query: 249 SIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRN 428
S + S + E RK QNVDAL+RG+LVV+RQS+LPRV SVTD A RKPFKPP S+GY +
Sbjct: 39 SAVKSPTSDEGRKSQNVDALLRGNLVVRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 98
Query: 429 NNEQLARRLW 458
N+QL RLW
Sbjct: 99 RNDQLVHRLW 108
>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = +3
Query: 234 EVRRSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCS 413
E +SS +S +S ED K +NVDAL+RG+LVV+RQS+LPRV SV + A RKPFKPPCS
Sbjct: 34 EEEQSSSLSPSSD-EDLKSKNVDALLRGNLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCS 92
Query: 414 DGYRNNNEQLARRLW 458
GY N QLARRLW
Sbjct: 93 SGYDERNNQLARRLW 107
>dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
Length = 912
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 243 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 422
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 423 RNNNEQLARRL 455
NNEQLARRL
Sbjct: 151 SENNEQLARRL 161
>ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa
Japonica Group]
Length = 879
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 243 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 422
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 423 RNNNEQLARRL 455
NNEQLARRL
Sbjct: 151 SENNEQLARRL 161
>gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
Length = 952
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 243 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 422
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 423 RNNNEQLARRL 455
NNEQLARRL
Sbjct: 151 SENNEQLARRL 161
>gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
Length = 952
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 243 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 422
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 423 RNNNEQLARRL 455
NNEQLARRL
Sbjct: 151 SENNEQLARRL 161
>sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
Short=OsRad54 gi|144369229|dbj|BAF56217.1| OsRad54
[Oryza sativa Japonica Group]
Length = 980
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 243 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 422
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 423 RNNNEQLARRL 455
NNEQLARRL
Sbjct: 151 SENNEQLARRL 161
>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +3
Query: 249 SIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRN 428
S + S + E RK QNVDAL+RG+LV++RQS+LPRV SVTD A RKPFKPP S+GY +
Sbjct: 39 SAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 98
Query: 429 NNEQLARRLW 458
N+QL RLW
Sbjct: 99 RNDQLVHRLW 108
>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
Length = 1112
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +3
Query: 249 SIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRN 428
S + S + E RK QNVDAL+RG+LV++RQS+LPRV SVTD A RKPFKPP S+GY +
Sbjct: 33 SAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 92
Query: 429 NNEQLARRLW 458
N+QL RLW
Sbjct: 93 RNDQLVHRLW 102
>ref|XP_004954012.1| PREDICTED: DNA repair and recombination protein RAD54-like [Setaria
italica]
Length = 972
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = +3
Query: 279 DRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLARRL 455
+RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY NNEQLARRL
Sbjct: 96 ERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLARRL 154
>ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Brachypodium distachyon]
Length = 965
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = +3
Query: 276 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLARRL 455
E+RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY NNE LARRL
Sbjct: 88 EERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCENGYSENNEHLARRL 147
>ref|XP_006647954.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Oryza brachyantha]
Length = 974
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 279 DRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLARRL 455
+RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY NNEQL+RRL
Sbjct: 97 ERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLSRRL 155
>gb|EPS60250.1| hypothetical protein M569_14554, partial [Genlisea aurea]
Length = 800
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +3
Query: 279 DRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLARRLW 458
+RK +NV ALVRG+L V+RQS+ PRVYSVTDA LRKPFKPP S GY N EQLARRLW
Sbjct: 33 ERKPKNVAALVRGNLEVRRQSLFPRVYSVTDAESTLRKPFKPPSSCGYSGNKEQLARRLW 92