BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00023941
         (230 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
emb|CBI21173.3| unnamed protein product [Vitis vinifera]              110   2e-22
emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]   108   1e-21
gb|EXC18771.1| hypothetical protein L484_007144 [Morus notabilis]     106   3e-21
ref|XP_002533336.1| pentatricopeptide repeat-containing protein,...   103   3e-20
gb|EOY29285.1| Pentatricopeptide repeat-containing protein, puta...   101   1e-19
ref|XP_006347936.1| PREDICTED: putative pentatricopeptide repeat...    96   5e-18
ref|XP_004229762.1| PREDICTED: putative pentatricopeptide repeat...    94   1e-17
ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    94   2e-17
ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_002310370.1| pentatricopeptide repeat-containing family p...    93   4e-17
ref|XP_004291771.1| PREDICTED: putative pentatricopeptide repeat...    92   9e-17
gb|EPS62386.1| hypothetical protein M569_12404 [Genlisea aurea]        91   2e-16
gb|EMJ27677.1| hypothetical protein PRUPE_ppa027076mg, partial [...    87   2e-15
ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago t...    80   3e-13
dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]         79   6e-13
ref|XP_006290671.1| hypothetical protein CARUB_v10016762mg [Caps...    79   6e-13
ref|XP_002333584.1| predicted protein [Populus trichocarpa]            79   6e-13
ref|NP_189226.2| pentatricopeptide repeat-containing protein [Ar...    79   6e-13
ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp....    79   8e-13

>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/76 (71%), Positives = 61/76 (80%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           QRD+ SWNTMIAGFVN GNF +A E  KSMK +GF+ DGYSFGSILKGVAC  Y+ VGQQ
Sbjct: 62  QRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQ 121

Query: 50  VHSDVVKRGYGENVYA 3
           VHS +VK GY  NV+A
Sbjct: 122 VHSMMVKMGYEGNVFA 137


>emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/76 (71%), Positives = 61/76 (80%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           QRD+ SWNTMIAGFVN GNF +A E  KSMK +GF+ DGYSFGSILKGVAC  Y+ VGQQ
Sbjct: 62  QRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQ 121

Query: 50  VHSDVVKRGYGENVYA 3
           VHS +VK GY  NV+A
Sbjct: 122 VHSMMVKMGYEGNVFA 137


>emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  108 bits (269), Expect = 1e-21
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           QRD+ SWNTMIAG VN GNF +A E  KSMK +GF+ DGYSFGSILKGVAC  Y+ VGQQ
Sbjct: 62  QRDAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQ 121

Query: 50  VHSDVVKRGYGENVYA 3
           VHS +VK GY  NV+A
Sbjct: 122 VHSMIVKIGYEGNVFA 137


>gb|EXC18771.1| hypothetical protein L484_007144 [Morus notabilis]
          Length = 700

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/75 (68%), Positives = 57/75 (76%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           QRDS SWNTMIAG VN GNF +AWE FK+MK  GF  DGY+FGS+LKGVA      +GQQ
Sbjct: 62  QRDSVSWNTMIAGNVNRGNFENAWEFFKNMKKCGFELDGYTFGSLLKGVASAHQWSIGQQ 121

Query: 50  VHSDVVKRGYGENVY 6
           VHS +VK GY ENVY
Sbjct: 122 VHSMIVKMGYAENVY 136


>ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526827|gb|EEF29045.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  103 bits (256), Expect = 3e-20
 Identities = 50/75 (66%), Positives = 59/75 (78%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RD+ +WNTMI+G+VNSG+  SAWEL+KSMK  G   D Y+FGSILKGVAC   L VGQQV
Sbjct: 65  RDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQV 124

Query: 47  HSDVVKRGYGENVYA 3
           HS +VK GY E+VYA
Sbjct: 125 HSLIVKMGYEEHVYA 139


>gb|EOY29285.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 716

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/75 (65%), Positives = 58/75 (77%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RD+ SWNTMIAG+VN GN  +A+E+ K MK  GF FDGY+FGS+LKGVA    L VGQQ+
Sbjct: 64  RDTVSWNTMIAGYVNCGNLETAFEIMKDMKRCGFDFDGYTFGSLLKGVASAYRLQVGQQL 123

Query: 47  HSDVVKRGYGENVYA 3
           HS +VK GY ENVYA
Sbjct: 124 HSMIVKMGYEENVYA 138


>ref|XP_006347936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Solanum tuberosum]
          Length = 697

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/75 (62%), Positives = 54/75 (72%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RD+ASWN MI+G+VNSG FLSAW     MK  GF  + Y+FGSILKG+A    L +GQQV
Sbjct: 56  RDTASWNIMISGYVNSGRFLSAWVFLNLMKEDGFCLNEYTFGSILKGIASNGLLSLGQQV 115

Query: 47  HSDVVKRGYGENVYA 3
           H DVVK GY  NVYA
Sbjct: 116 HCDVVKIGYVGNVYA 130


>ref|XP_004229762.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Solanum lycopersicum]
          Length = 704

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/75 (60%), Positives = 54/75 (72%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RD+A+WN MI+G+VNSG F SAW     MK +GF  + Y+FGSILKG+A    L +GQQV
Sbjct: 63  RDTAAWNIMISGYVNSGRFQSAWVFLNLMKENGFCLNDYTFGSILKGIASNGLLSLGQQV 122

Query: 47  HSDVVKRGYGENVYA 3
           H DVVK GY  NVYA
Sbjct: 123 HCDVVKMGYVGNVYA 137


>ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/75 (54%), Positives = 54/75 (72%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RDS SWNTMIAG +N GN  ++W++ + M+  GF  D Y+FGS+LKG+A      +GQQV
Sbjct: 62  RDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQV 121

Query: 47  HSDVVKRGYGENVYA 3
           HS ++K GY ENVYA
Sbjct: 122 HSIIIKMGYAENVYA 136


>ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/75 (54%), Positives = 54/75 (72%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RDS SWNTMIAG +N GN  ++W++ + M+  GF  D Y+FGS+LKG+A      +GQQV
Sbjct: 62  RDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQV 121

Query: 47  HSDVVKRGYGENVYA 3
           HS ++K GY ENVYA
Sbjct: 122 HSIIIKMGYAENVYA 136


>ref|XP_002310370.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222853273|gb|EEE90820.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 711

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/75 (60%), Positives = 55/75 (73%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           +D+ +WNTMI G+V SGN  +AWE  KSMK  GF  DGY+FGSILKGVA      +GQQV
Sbjct: 65  KDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQV 124

Query: 47  HSDVVKRGYGENVYA 3
           HS +VK GY ++VYA
Sbjct: 125 HSLIVKIGYEQSVYA 139


>ref|XP_004291771.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Fragaria vesca subsp. vesca]
          Length = 700

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/75 (58%), Positives = 54/75 (72%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RD+ SWNT+IAG VN     +AW++ +SM+  GF FDGY+FGSILKGVAC     +GQQV
Sbjct: 59  RDTVSWNTIIAGHVNCRQLEAAWDVLRSMRRCGFGFDGYTFGSILKGVACALRCDLGQQV 118

Query: 47  HSDVVKRGYGENVYA 3
           H  VVK GY  NVY+
Sbjct: 119 HCVVVKVGYESNVYS 133


>gb|EPS62386.1| hypothetical protein M569_12404 [Genlisea aurea]
          Length = 704

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           +RDSASWNT+I+G+VN+ +  +AW + KSMK  GF  D Y+FGS+LKG+A    +  GQQ
Sbjct: 62  RRDSASWNTVISGYVNADDPSNAWGVVKSMKRLGFPLDAYTFGSVLKGIASGGSVVCGQQ 121

Query: 50  VHSDVVKRGYGENVYA 3
           +HSD+VK G+ +NVY+
Sbjct: 122 LHSDIVKLGFTDNVYS 137


>gb|EMJ27677.1| hypothetical protein PRUPE_ppa027076mg, partial [Prunus persica]
          Length = 620

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/67 (64%), Positives = 50/67 (74%)
 Frame = -1

Query: 203 MIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQVHSDVVKRG 24
           MIAG VN GNF +AWE+ + MK  GF FDGY+FGSILKGVAC     +G+QVHS VVK G
Sbjct: 1   MIAGHVNYGNFETAWEILREMKGCGFDFDGYTFGSILKGVACAYRCDLGEQVHSMVVKTG 60

Query: 23  YGENVYA 3
           Y  NVY+
Sbjct: 61  YVGNVYS 67


>ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355522708|gb|AET03162.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 699

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 35/76 (46%), Positives = 54/76 (71%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           QRD+ SWN +I+G+VN+ +  S W+L  +M++ G +FD ++FGS LKGVA    L +GQQ
Sbjct: 62  QRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQ 121

Query: 50  VHSDVVKRGYGENVYA 3
           +HS ++K    ENV++
Sbjct: 122 LHSVMIKMRLNENVFS 137


>dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
          Length = 598

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/75 (50%), Positives = 47/75 (62%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           +RDS SWNTMI+G+ + G    AW LF  MK  G   DGYSF  +LKG+A      +G+Q
Sbjct: 63  KRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQ 122

Query: 50  VHSDVVKRGYGENVY 6
           VH  V+K GY  NVY
Sbjct: 123 VHGLVIKGGYECNVY 137


>ref|XP_006290671.1| hypothetical protein CARUB_v10016762mg [Capsella rubella]
           gi|482559378|gb|EOA23569.1| hypothetical protein
           CARUB_v10016762mg [Capsella rubella]
          Length = 702

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           RDS SWNT+I+G+ + G    AW LF  M+  G + DG+SF  +LKG+A    + +G+QV
Sbjct: 64  RDSVSWNTVISGYTSCGKLEDAWRLFTCMRRSGCNVDGHSFSRLLKGIAFAKRIDLGEQV 123

Query: 47  HSDVVKRGYGENVY 6
           HS VVKRGY  NV+
Sbjct: 124 HSLVVKRGYECNVF 137


>ref|XP_002333584.1| predicted protein [Populus trichocarpa]
          Length = 196

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = -1

Query: 227 RDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQV 48
           +D+ + +T+I  +V+SGN  +AW+  KSMK  GF  DGY+FGSI KGVA  S   +GQ+ 
Sbjct: 4   KDTVTLDTVITAYVDSGNLRAAWDFLKSMKRCGFQADGYTFGSIFKGVARASRYDLGQKG 63

Query: 47  HSDVVKRGYGENVYA 3
           HS +VK GY  NVYA
Sbjct: 64  HSLIVKIGYERNVYA 78


>ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g25970 gi|332643575|gb|AEE77096.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/75 (50%), Positives = 47/75 (62%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           +RDS SWNTMI+G+ + G    AW LF  MK  G   DGYSF  +LKG+A      +G+Q
Sbjct: 63  KRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQ 122

Query: 50  VHSDVVKRGYGENVY 6
           VH  V+K GY  NVY
Sbjct: 123 VHGLVIKGGYECNVY 137


>ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322779|gb|EFH53200.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/75 (52%), Positives = 48/75 (64%)
 Frame = -1

Query: 230 QRDSASWNTMIAGFVNSGNFLSAWELFKSMKIHGFSFDGYSFGSILKGVACYSYLFVGQQ 51
           QRDS SWNTMI+G+ + G   ++W LF  MK  G   DGYSF  +LKG+A      +G+Q
Sbjct: 9   QRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRFDLGEQ 68

Query: 50  VHSDVVKRGYGENVY 6
           VH  VVK GY  NVY
Sbjct: 69  VHGLVVKGGYECNVY 83