BLASTX nr result
ID: Catharanthus22_contig00023781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00023781
(1809 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS56101.1| Zinc finger CCCH domain-containing protein 56 [Tr... 74 3e-10
gb|EXB64915.1| Zinc finger CCCH domain-containing protein 56 [Mo... 72 6e-10
gb|EPS63418.1| hypothetical protein M569_11366 [Genlisea aurea] 72 6e-10
gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays] 72 8e-10
ref|NP_001061044.1| Os08g0159800 [Oryza sativa Japonica Group] g... 72 1e-09
ref|XP_006659856.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-09
ref|XP_004972781.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-09
ref|XP_003573458.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-09
ref|XP_003573455.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-09
dbj|BAK04504.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 1e-09
gb|EAZ41590.1| hypothetical protein OsJ_26123 [Oryza sativa Japo... 72 1e-09
gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indi... 72 1e-09
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-09
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-09
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici... 71 1e-09
ref|XP_004300410.1| PREDICTED: zinc finger CCCH domain-containin... 71 2e-09
gb|EMJ10512.1| hypothetical protein PRUPE_ppa008182mg [Prunus pe... 71 2e-09
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin... 71 2e-09
emb|CBI33870.3| unnamed protein product [Vitis vinifera] 71 2e-09
ref|NP_564396.1| zinc finger CCCH domain-containing protein 12 [... 70 2e-09
>gb|EMS56101.1| Zinc finger CCCH domain-containing protein 56 [Triticum urartu]
Length = 332
Score = 73.6 bits (179), Expect = 3e-10
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGAEG 92
NWKTRICNKWE+TGYCPFGSKCHFAHGA G
Sbjct: 242 NWKTRICNKWEMTGYCPFGSKCHFAHGAAG 271
>gb|EXB64915.1| Zinc finger CCCH domain-containing protein 56 [Morus notabilis]
Length = 361
Score = 72.4 bits (176), Expect = 6e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWELTGYCPFGSKCHFAHGA
Sbjct: 239 NWKTRICNKWELTGYCPFGSKCHFAHGA 266
>gb|EPS63418.1| hypothetical protein M569_11366 [Genlisea aurea]
Length = 367
Score = 72.4 bits (176), Expect = 6e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWELTGYCPFGSKCHFAHGA
Sbjct: 239 NWKTRICNKWELTGYCPFGSKCHFAHGA 266
>gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays]
Length = 363
Score = 72.0 bits (175), Expect = 8e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGAEGMI 98
NWKTRICNKWE+TGYCPFGSKCHFAHG+ +I
Sbjct: 237 NWKTRICNKWEMTGYCPFGSKCHFAHGSTAII 268
>ref|NP_001061044.1| Os08g0159800 [Oryza sativa Japonica Group]
gi|75243377|sp|Q84UQ3.1|C3H56_ORYSJ RecName: Full=Zinc
finger CCCH domain-containing protein 56; Short=OsC3H56
gi|29467558|dbj|BAC66728.1| putative zinc finger protein
[Oryza sativa Japonica Group]
gi|37806157|dbj|BAC99662.1| putative zinc finger protein
[Oryza sativa Japonica Group]
gi|113623013|dbj|BAF22958.1| Os08g0159800 [Oryza sativa
Japonica Group]
Length = 367
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 245 NWKTRICNKWEMTGYCPFGSKCHFAHGA 272
>ref|XP_006659856.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Oryza brachyantha]
Length = 320
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 198 NWKTRICNKWEMTGYCPFGSKCHFAHGA 225
>ref|XP_004972781.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Setaria italica]
Length = 364
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 242 NWKTRICNKWEMTGYCPFGSKCHFAHGA 269
>ref|XP_003573458.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 362
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 240 NWKTRICNKWEMTGYCPFGSKCHFAHGA 267
>ref|XP_003573455.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 363
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 241 NWKTRICNKWEMTGYCPFGSKCHFAHGA 268
>dbj|BAK04504.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 241 NWKTRICNKWEMTGYCPFGSKCHFAHGA 268
>gb|EAZ41590.1| hypothetical protein OsJ_26123 [Oryza sativa Japonica Group]
Length = 367
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 245 NWKTRICNKWEMTGYCPFGSKCHFAHGA 272
>gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
Length = 367
Score = 71.6 bits (174), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFGSKCHFAHGA
Sbjct: 245 NWKTRICNKWEMTGYCPFGSKCHFAHGA 272
>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Cucumis sativus]
Length = 350
Score = 71.2 bits (173), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWELTGYCPFG+KCHFAHGA
Sbjct: 230 NWKTRICNKWELTGYCPFGNKCHFAHGA 257
>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Cucumis sativus]
Length = 339
Score = 71.2 bits (173), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWELTGYCPFG+KCHFAHGA
Sbjct: 219 NWKTRICNKWELTGYCPFGNKCHFAHGA 246
>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223532956|gb|EEF34722.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 349
Score = 71.2 bits (173), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWELTGYCPFG+KCHFAHGA
Sbjct: 228 NWKTRICNKWELTGYCPFGNKCHFAHGA 255
>ref|XP_004300410.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Fragaria vesca subsp. vesca]
Length = 346
Score = 70.9 bits (172), Expect = 2e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHG 83
NWKTRICNKWELTGYCPFGSKCHFAHG
Sbjct: 227 NWKTRICNKWELTGYCPFGSKCHFAHG 253
>gb|EMJ10512.1| hypothetical protein PRUPE_ppa008182mg [Prunus persica]
Length = 342
Score = 70.9 bits (172), Expect = 2e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHG 83
NWKTRICNKWELTGYCPFGSKCHFAHG
Sbjct: 221 NWKTRICNKWELTGYCPFGSKCHFAHG 247
>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Vitis vinifera]
Length = 372
Score = 70.9 bits (172), Expect = 2e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHG 83
NWKTRICNKWELTGYCPFGSKCHFAHG
Sbjct: 246 NWKTRICNKWELTGYCPFGSKCHFAHG 272
>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 70.9 bits (172), Expect = 2e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHG 83
NWKTRICNKWELTGYCPFGSKCHFAHG
Sbjct: 209 NWKTRICNKWELTGYCPFGSKCHFAHG 235
>ref|NP_564396.1| zinc finger CCCH domain-containing protein 12 [Arabidopsis
thaliana] gi|75264181|sp|Q9LQM3.1|C3H12_ARATH RecName:
Full=Zinc finger CCCH domain-containing protein 12;
Short=AtC3H12 gi|8920610|gb|AAF81332.1|AC007767_12
Contains similarity to an unknown protein At2g35430
gi|3608145 from Arabidopsis thaliana BAC T32F12
gb|AC005314. It contains a zinc finger C-x8-C-x5-C-x3-H
type domain PF|00642. ESTs gb|AV557765 and gb|AV544407
come from this gene [Arabidopsis thaliana]
gi|12597862|gb|AAG60171.1|AC084110_4 unknown protein
[Arabidopsis thaliana] gi|26451083|dbj|BAC42646.1|
putative RING-H2 zinc finger protein ATL6 [Arabidopsis
thaliana] gi|332193347|gb|AEE31468.1| zinc finger CCCH
domain-containing protein 12 [Arabidopsis thaliana]
Length = 384
Score = 70.5 bits (171), Expect = 2e-09
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +3
Query: 3 NWKTRICNKWELTGYCPFGSKCHFAHGA 86
NWKTRICNKWE+TGYCPFG+KCHFAHGA
Sbjct: 260 NWKTRICNKWEITGYCPFGAKCHFAHGA 287