BLASTX nr result
ID: Catharanthus22_contig00023629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00023629
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB37637.1| Receptor-like protein 12 [Morus notabilis] 46 9e-08
gb|EXB99124.1| G-type lectin S-receptor-like serine/threonine-pr... 45 8e-07
ref|NP_001235160.1| gag-protease polyprotein [Glycine max] gi|74... 44 1e-06
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 43 2e-06
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 43 2e-06
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 43 2e-06
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 44 2e-06
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 44 2e-06
>gb|EXB37637.1| Receptor-like protein 12 [Morus notabilis]
Length = 1482
Score = 46.2 bits (108), Expect(2) = 9e-08
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -2
Query: 244 KGGLLVRPPLLKGTNYVYWKERMRIFIQTLDD 149
+GG + RPPLL G NY YWK RM+ FI+ LD+
Sbjct: 6 EGGSVSRPPLLDGCNYSYWKARMKAFIKALDE 37
Score = 35.4 bits (80), Expect(2) = 9e-08
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -1
Query: 140 GWKMLVKPNDKE----KPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
GW V ND KP S EE + + +N++A N IF GVD QFK
Sbjct: 46 GWTHPVTKNDAGEEAMKPEEKWSTEEDRLANSNSRALNAIFNGVDANQFK 95
>gb|EXB99124.1| G-type lectin S-receptor-like serine/threonine-protein kinase
[Morus notabilis]
Length = 673
Score = 45.1 bits (105), Expect(2) = 8e-07
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = -2
Query: 244 KGGLLVRPPLLKGTNYVYWKERMRIFIQTLDD 149
+GG + RPPLL G+NY+YWK M+ FI+ +D+
Sbjct: 524 EGGSVSRPPLLDGSNYLYWKASMKAFIKAIDE 555
Score = 33.5 bits (75), Expect(2) = 8e-07
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 104 KPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP + S EE K + N+KA N F GVD QFK
Sbjct: 580 KPETTWSTEEDKLANNNSKALNVFFNGVDANQFK 613
>ref|NP_001235160.1| gag-protease polyprotein [Glycine max] gi|7488678|pir||T06419
gag-proteinase polyprotein - soybean retrovirus-like
element gi|905361|gb|AAC18777.1| gag-protease
polyprotein [Glycine max]
Length = 640
Score = 44.3 bits (103), Expect(2) = 1e-06
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 250 QMKGGLLVRPPLLKGTNYVYWKERMRIFIQTLD 152
+ +GG + RPP+L GTNY YWK RM F+++LD
Sbjct: 4 EKEGGPVNRPPILDGTNYEYWKARMVAFLKSLD 36
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1
Query: 122 KPNDKEKPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP D KP + + EE + +L N+KA N +F GVD F+
Sbjct: 58 KPTDGLKPEEDWTKEEDELALGNSKALNALFNGVDKNIFR 97
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -2
Query: 250 QMKGGLLVRPPLLKGTNYVYWKERMRIFIQTLD 152
+ +GG + RPP+L G+NY YWK RM F+++LD
Sbjct: 4 EKEGGPVNRPPILDGSNYEYWKARMVAFLKSLD 36
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 122 KPNDKEKPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP D+ KP + + EE + +L N+KA N +F GVD F+
Sbjct: 58 KPTDELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFR 97
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -2
Query: 250 QMKGGLLVRPPLLKGTNYVYWKERMRIFIQTLD 152
+ +GG + RPP+L G+NY YWK RM F+++LD
Sbjct: 4 EKEGGPVNRPPILDGSNYEYWKARMVAFLKSLD 36
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 122 KPNDKEKPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP D+ KP + + EE + +L N+KA N +F GVD F+
Sbjct: 58 KPTDELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFR 97
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -2
Query: 250 QMKGGLLVRPPLLKGTNYVYWKERMRIFIQTLD 152
+ +GG + RPP+L G+NY YWK RM F+++LD
Sbjct: 4 EKEGGPVNRPPILDGSNYEYWKARMVAFLKSLD 36
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -1
Query: 122 KPNDKEKPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP D+ KP + + EE + +L N+KA N +F GVD F+
Sbjct: 58 KPTDELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFR 97
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 250 QMKGGLLVRPPLLKGTNYVYWKERMRIFIQTLD 152
+ +GG + RPP+L GTNY YWK RM F+++LD
Sbjct: 4 EKEGGPVNRPPILDGTNYEYWKARMVAFLKSLD 36
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 122 KPNDKEKPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP ++ KP + + EE + +L N+KA N +F GVD F+
Sbjct: 58 KPTNELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFR 97
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 250 QMKGGLLVRPPLLKGTNYVYWKERMRIFIQTLD 152
+ +GG + RPP+L GTNY YWK RM F+++LD
Sbjct: 4 EKEGGPVNRPPILDGTNYEYWKARMVAFLKSLD 36
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 122 KPNDKEKPRSN*SFEEKKNSLTNTKARNTIFAGVDLEQFK 3
KP ++ KP + + EE + +L N+KA N +F GVD F+
Sbjct: 58 KPTNELKPEEDWTKEEDELALGNSKALNALFNGVDKNIFR 97