BLASTX nr result
ID: Catharanthus22_contig00023327
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00023327 (299 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protei... 64 3e-08 dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana] 55 7e-06 ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei... 55 1e-05 >ref|XP_006363377.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum tuberosum] Length = 125 Score = 63.5 bits (153), Expect = 3e-08 Identities = 29/35 (82%), Positives = 32/35 (91%) Frame = -3 Query: 105 LSFYTTTEGLRRLFGPFGVVTEVRLVKDPRTQRPK 1 LSFYTT+E L++LF PFGVVTE RLVKDPRTQRPK Sbjct: 43 LSFYTTSEQLKKLFSPFGVVTEARLVKDPRTQRPK 77 >dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana] Length = 112 Score = 55.5 bits (132), Expect = 7e-06 Identities = 26/46 (56%), Positives = 32/46 (69%) Frame = -3 Query: 138 EYFFLFLLAIGLSFYTTTEGLRRLFGPFGVVTEVRLVKDPRTQRPK 1 E+ F GLS YTT + LR+LF PFG +TE RL+KD +TQRPK Sbjct: 17 EFLFSNCSLAGLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQRPK 62 >ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera] gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera] Length = 112 Score = 55.1 bits (131), Expect = 1e-05 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 4/55 (7%) Frame = -3 Query: 153 NLIRPEY----FFLFLLAIGLSFYTTTEGLRRLFGPFGVVTEVRLVKDPRTQRPK 1 NL++P + F + LS YTT E L +F PFGVVT+ RL+KDP+TQRPK Sbjct: 12 NLLKPWFSARRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPK 66