BLASTX nr result
ID: Catharanthus22_contig00023308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00023308
(390 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 72 1e-10
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 71 1e-10
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe... 70 3e-10
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 70 4e-10
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 69 6e-10
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 69 8e-10
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 69 8e-10
gb|EMJ25696.1| hypothetical protein PRUPE_ppa023013mg, partial [... 69 8e-10
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 67 2e-09
gb|EMT18993.1| hypothetical protein F775_02609 [Aegilops tauschii] 66 4e-09
gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus pe... 66 4e-09
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [... 65 7e-09
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 65 9e-09
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 65 9e-09
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 65 1e-08
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas... 65 1e-08
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S... 64 2e-08
ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A... 64 3e-08
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297... 64 3e-08
ref|XP_002442481.1| hypothetical protein SORBIDRAFT_08g020692 [S... 64 3e-08
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/113 (37%), Positives = 56/113 (49%)
Frame = +3
Query: 48 KKLC*KS*NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHV 227
+K+ S LCK K GGMGFR + FN ALLAKQC R++ LVA A+YFP
Sbjct: 83 RKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQT 142
Query: 228 IFLDASLVRRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGF 386
FLDA + S+ + +GNG S S+ +KW+ + F
Sbjct: 143 SFLDALVGSNPSFTWRSIVGSRSLLNAGLRWRVGNGASISVKYDKWVPRPHSF 195
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LCK K GG+GFRD E+FN ALLAKQC RI+ + LVA A+Y P V FL+A +
Sbjct: 547 LCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTN 606
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S+ + +G+G+S + ++KW+
Sbjct: 607 PSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWL 643
>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/97 (39%), Positives = 53/97 (54%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LCK K GG+GFRD E+FN ALLAKQC RI+ + LVA A+Y P V FL+A +
Sbjct: 797 LCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTN 856
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S+ +G+G+S + ++KW+
Sbjct: 857 PSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWL 893
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/113 (37%), Positives = 55/113 (48%)
Frame = +3
Query: 48 KKLC*KS*NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHV 227
+K+ S LCK K GGMGFR + FN ALLAKQC R+ LVA A+YFP
Sbjct: 83 RKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQT 142
Query: 228 IFLDASLVRRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGF 386
FLDA + S+ + +GNG S S+ +KW+ + F
Sbjct: 143 SFLDALVGSNPSFTWRSIVGSRRLLNAGLRWRVGNGASISVKYDKWVPRPHSF 195
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 68.9 bits (167), Expect = 6e-10
Identities = 39/97 (40%), Positives = 52/97 (53%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LC+ K GGMGFRD ++FN +LLAKQC RI+ + + L A L A+YFP FLDA R
Sbjct: 403 LCRPKAEGGMGFRDLQAFNWSLLAKQCWRILRNPTTLWARILKARYFPECSFLDAKKGGR 462
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S+ IGNG S+ ++W+
Sbjct: 463 ASWAWSSLLVGRDIIEKGARWQIGNGHLVSVWKDRWL 499
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/97 (38%), Positives = 51/97 (52%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LC K GG+GFR+F SFN AL+AKQ R++ +L L+A L AKYF H F++A L
Sbjct: 189 LCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHTDFMEAKLGSN 248
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S+ + +GNG S+ S W+
Sbjct: 249 PSFVWRSILWGRQLLHEGLRWRVGNGHKISVFSRNWM 285
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/97 (38%), Positives = 51/97 (52%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LC K GG+GFR+F SFN AL+AKQ R++ +L L+A L AKYF H F++A L
Sbjct: 280 LCSAKTRGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHTDFMEAKLGSN 339
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S+ + +GNG S+ S W+
Sbjct: 340 PSFVWRSILWGRQLLHEGLRWRVGNGHKISVFSRNWM 376
>gb|EMJ25696.1| hypothetical protein PRUPE_ppa023013mg, partial [Prunus persica]
Length = 607
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/103 (36%), Positives = 52/103 (50%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LC + GGMGFRD ESFN L+AKQC R++ + ++ L A+YFP+ FL R
Sbjct: 144 LCFANDEGGMGFRDLESFNKVLVAKQCWRLLTNEQTMIHKVLKARYFPNCNFLAVGKGRA 203
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGF 386
SYF + + IG+G T + + WI N F
Sbjct: 204 SSYFWRSLIWGHELLLSGLRKRIGDGQETLVYGDAWIPRPNSF 246
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/97 (42%), Positives = 50/97 (51%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
+C KN GG+GFR+ E FN ALLAK+ RII SL LV L AKYFP FL A +
Sbjct: 804 MCAPKNEGGLGFRNMELFNQALLAKKGWRIINSLDSLVTRTLKAKYFPSGHFLKAEMGSD 863
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
SY + +GNG S S+ + WI
Sbjct: 864 ASYVWRSLLKGRDLLRKGIRYHVGNGESISVWHDPWI 900
>gb|EMT18993.1| hypothetical protein F775_02609 [Aegilops tauschii]
Length = 1349
Score = 66.2 bits (160), Expect = 4e-09
Identities = 40/97 (41%), Positives = 50/97 (51%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
+ + K +GGMGFRD E FNLALLA+Q RI+ + L A L A YFP+ L+A L R
Sbjct: 1002 MTRPKYLGGMGFRDLELFNLALLARQAWRILQEPASLSARILKAAYFPNRTILEAELGSR 1061
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S + Q IGNG T I + WI
Sbjct: 1062 PSQIWRAMLEGRDMLKQGLIQRIGNGQDTMIWEDNWI 1098
>gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/105 (37%), Positives = 54/105 (51%)
Frame = +3
Query: 72 NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLV 251
N LC K GG+GFR+ +FN+ALLAKQ R+I + + LVA L A+YF + L+A +
Sbjct: 437 NKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVARILKARYFKNCSILEAQIG 496
Query: 252 RRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGF 386
SY Q IGNG S I ++W+ + F
Sbjct: 497 HSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGDRWLPNSESF 541
>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
Length = 925
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/97 (39%), Positives = 52/97 (53%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LCK K GGMGFR ++FN+A+LAKQ R++ + L + L AKYFPH F +A+L R
Sbjct: 413 LCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPHTNFWEATLGSR 472
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S + IG+G S I +KW+
Sbjct: 473 PSCVWKSIWTARKVLEMGSRFQIGDGKSVRIWGDKWV 509
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 65.1 bits (157), Expect = 9e-09
Identities = 39/105 (37%), Positives = 54/105 (51%)
Frame = +3
Query: 72 NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLV 251
N LC K GG+GFR+ +FN+ALLAKQ R+I + + LVA L A+YF + L+A +
Sbjct: 1205 NKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVACILKARYFKNCSILEAQIG 1264
Query: 252 RRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGF 386
SY Q IGNG S I ++W+ + F
Sbjct: 1265 HSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGDRWLPNSESF 1309
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 65.1 bits (157), Expect = 9e-09
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
+C K GG+GFRD ESFN ALLAKQ R++ + L A ++Y+ FLDA L
Sbjct: 846 MCLSKENGGLGFRDIESFNQALLAKQAWRLLQFPNSLFARFFKSRYYDEEDFLDAELKAT 905
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIH 371
SY + + +GNG STS+ + WI+
Sbjct: 906 PSYAWRSILHGRDLLIKGFRKKVGNGSSTSVWMDPWIY 943
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/105 (36%), Positives = 53/105 (50%)
Frame = +3
Query: 72 NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLV 251
N LC K GG+GFR+ +FN+ LLAKQ R+I + + LVA L A+YF + L+A +
Sbjct: 655 NKLCLPKQEGGLGFRNLYAFNMVLLAKQLWRLIQTPNSLVARILKARYFKNCSILEAQIG 714
Query: 252 RRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGF 386
SY Q IGNG S I ++W+ + F
Sbjct: 715 HSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGDRWLPNSESF 759
>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 573
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/100 (37%), Positives = 53/100 (53%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
L HK++GG+GFR+ E+FNL++L KQ +++ S L L AKYFP FLDA+L
Sbjct: 376 LTLHKSLGGLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLDATLGHN 435
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSL 377
SY + IG+G ++ S WI +L
Sbjct: 436 PSYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNL 475
>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
gi|241936686|gb|EES09831.1| hypothetical protein
SORBIDRAFT_05g019526 [Sorghum bicolor]
Length = 1209
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/107 (37%), Positives = 54/107 (50%)
Frame = +3
Query: 48 KKLC*KS*NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHV 227
+K C + +D+ K K +GG+GFRD E FNLALLAKQ R++ + L A L A YFP
Sbjct: 877 RKTCWVAWDDMIKPKFLGGLGFRDIELFNLALLAKQAWRVLSGANSLSARILKAVYFPDT 936
Query: 228 IFLDASLVRRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
FL A L S + + IG G +T I + W+
Sbjct: 937 EFLQARLGNAPSRIWRSILDGRDVLEQGLIRRIGTGEATYIWTMNWL 983
>ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 473
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/104 (36%), Positives = 52/104 (50%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
+C K GG+GFRDF SFN ALLAKQ R++ + L+A L AKYF H F++A L +
Sbjct: 1 MCHAKIRGGLGFRDFSSFNHALLAKQGWRLLHNPDSLMAKILKAKYFSHSGFMEAKLGSK 60
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWIHSLNGFT 389
S+ + IG G S S W+ ++ T
Sbjct: 61 PSFVWRSIIWGRELLQEGLRWRIGQGTKISACSKIWLRNVGSCT 104
>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
subsp. vesca]
Length = 1096
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/97 (37%), Positives = 51/97 (52%)
Frame = +3
Query: 78 LCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHVIFLDASLVRR 257
LC K GG+GFRD FN+ALLAKQ R+I + L+A L A+YFP F++A + +
Sbjct: 609 LCTTKAEGGLGFRDMRLFNMALLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAEVAKG 668
Query: 258 LSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
S+ + +GNG S S+ + WI
Sbjct: 669 CSFTWRSILKGRDLLKKGLRFQVGNGESISVWDDPWI 705
>ref|XP_002442481.1| hypothetical protein SORBIDRAFT_08g020692 [Sorghum bicolor]
gi|241943174|gb|EES16319.1| hypothetical protein
SORBIDRAFT_08g020692 [Sorghum bicolor]
Length = 208
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/107 (37%), Positives = 54/107 (50%)
Frame = +3
Query: 48 KKLC*KS*NDLCKHKNMGGMGFRDFESFNLALLAKQC*RIILSLSPLVANCLWAKYFPHV 227
+K C + +D+ K K +GG+GFRD E FNLALLAKQ R++ + L A L A YFP
Sbjct: 31 RKTCWVAWDDMIKPKFLGGLGFRDTELFNLALLAKQAWRVLSGANSLSARILKAVYFPDT 90
Query: 228 IFLDASLVRRLSYFGQIXXXXXXXXXXXXXQGIGNGLSTSISSNKWI 368
FL A L S + + IG G +T I + W+
Sbjct: 91 EFLQARLGNAPSRIWRSILDGRDVLEQGLIRRIGTGEATYIWTMNWL 137