BLASTX nr result
ID: Catharanthus22_contig00023272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00023272
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE73457.1| RNA-binding protein [Pan troglodytes] 249 2e-64
ref|WP_000552499.1| hypothetical protein, partial [Streptococcus... 248 8e-64
gb|AAC51266.1| p40 [Homo sapiens] 247 1e-63
gb|AAC51277.1| p40 [Homo sapiens] 247 1e-63
gb|AAC51278.1| p40 [Homo sapiens] 247 1e-63
gb|AAC51262.1| p40 [Homo sapiens] 247 1e-63
gb|AER41894.1| unknown [Homo sapiens] 247 1e-63
sp|Q9UN81.1|LORF1_HUMAN RecName: Full=LINE-1 retrotransposable e... 247 1e-63
gb|AAL50636.1| unknown [Homo sapiens] 247 1e-63
gb|AAD38784.1|AF149422_1 unknown [Homo sapiens] 247 1e-63
gb|AAB59367.1| ORF1 codes for a 40 kDa product [Homo sapiens] 246 3e-63
prf||1901303A Leu zipper protein p40 246 3e-63
pdb|2LDY|A Chain A, Solution Structure Of The Rmm-Ctd Domains Of... 246 3e-63
gb|AAC51265.1| p40 [Homo sapiens] 245 4e-63
gb|AAC51270.1| p40 [Homo sapiens] 245 5e-63
gb|EHH56485.1| hypothetical protein EGM_05903, partial [Macaca f... 245 5e-63
gb|EHH28247.1| hypothetical protein EGK_18644, partial [Macaca m... 245 5e-63
gb|AAP30718.1| ovarian epithelial carcinoma-related protein [Hom... 245 5e-63
gb|AAB60344.1| ORF1 [Homo sapiens] 245 5e-63
pdb|2YKP|A Chain A, Structure Of The Human Line-1 Orf1p Trimer g... 244 1e-62
>gb|ABE73457.1| RNA-binding protein [Pan troglodytes]
Length = 338
Score = 249 bits (637), Expect = 2e-64
Identities = 124/135 (91%), Positives = 129/135 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHI VRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHITVRFTKVEMKEKMLRTAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYFTDKQML DFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLTDFVTTRPAL 313
Query: 363 QELLKEALNMERNNW 407
+ELLKEALNMERNNW
Sbjct: 314 KELLKEALNMERNNW 328
>ref|WP_000552499.1| hypothetical protein, partial [Streptococcus agalactiae]
Length = 280
Score = 248 bits (632), Expect = 8e-64
Identities = 125/134 (93%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
NIQIQEIQR PQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 136 NIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 195
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYFTDKQMLRDFVTTRPAL
Sbjct: 196 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPAL 255
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 256 KELLKEALNMERNN 269
>gb|AAC51266.1| p40 [Homo sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AAC51277.1| p40 [Homo sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AAC51278.1| p40 [Homo sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AAC51262.1| p40 [Homo sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AER41894.1| unknown [Homo sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>sp|Q9UN81.1|LORF1_HUMAN RecName: Full=LINE-1 retrotransposable element ORF1 protein;
Short=L1ORF1p; AltName: Full=LINE retrotransposable
element 1; AltName: Full=LINE1 retrotransposable element
1 gi|5070621|gb|AAD39214.1|AF148856_1 unknown [Homo
sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AAL50636.1| unknown [Homo sapiens]
Length = 338
Score = 247 bits (631), Expect = 1e-63
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AAD38784.1|AF149422_1 unknown [Homo sapiens]
Length = 338
Score = 247 bits (630), Expect = 1e-63
Identities = 123/134 (91%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHI+VRFTKV+MKEKM R REKGQVT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHILVRFTKVEMKEKMLRAAREKGQVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKE+LNMERNN
Sbjct: 314 KELLKESLNMERNN 327
>gb|AAB59367.1| ORF1 codes for a 40 kDa product [Homo sapiens]
Length = 338
Score = 246 bits (627), Expect = 3e-63
Identities = 123/134 (91%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLT DL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTVDL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>prf||1901303A Leu zipper protein p40
Length = 338
Score = 246 bits (627), Expect = 3e-63
Identities = 123/134 (91%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLT DL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTVDL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>pdb|2LDY|A Chain A, Solution Structure Of The Rmm-Ctd Domains Of Human Line-1
Orf1p
Length = 182
Score = 246 bits (627), Expect = 3e-63
Identities = 123/134 (91%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLT DL
Sbjct: 40 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTVDL 99
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 100 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 159
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 160 KELLKEALNMERNN 173
>gb|AAC51265.1| p40 [Homo sapiens]
Length = 338
Score = 245 bits (626), Expect = 4e-63
Identities = 124/134 (92%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
NIQIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFV TRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVITRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|AAC51270.1| p40 [Homo sapiens]
Length = 338
Score = 245 bits (625), Expect = 5e-63
Identities = 123/134 (91%), Positives = 129/134 (96%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+K FTD+QMLRDFVTTRPAL
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDRQMLRDFVTTRPAL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>gb|EHH56485.1| hypothetical protein EGM_05903, partial [Macaca fascicularis]
Length = 144
Score = 245 bits (625), Expect = 5e-63
Identities = 123/133 (92%), Positives = 127/133 (95%)
Frame = +3
Query: 6 IQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADLS 185
IQIQEIQRTPQRYSSRRATPRHII RFTKV+MKEK+ R REKG+VTHKGKPIRLTADLS
Sbjct: 1 IQIQEIQRTPQRYSSRRATPRHIIARFTKVEMKEKILRAAREKGRVTHKGKPIRLTADLS 60
Query: 186 AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPALQ 365
AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+K FTDKQMLRDFVTTRPALQ
Sbjct: 61 AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALQ 120
Query: 366 ELLKEALNMERNN 404
E LKEALNMERNN
Sbjct: 121 ETLKEALNMERNN 133
>gb|EHH28247.1| hypothetical protein EGK_18644, partial [Macaca mulatta]
Length = 144
Score = 245 bits (625), Expect = 5e-63
Identities = 122/133 (91%), Positives = 128/133 (96%)
Frame = +3
Query: 6 IQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADLS 185
IQIQEIQRTPQRYSSRRATPRHII RFTKV+MKEK+ R REKG+VTHKGKPIRLTADLS
Sbjct: 1 IQIQEIQRTPQRYSSRRATPRHIIARFTKVEMKEKILRAAREKGRVTHKGKPIRLTADLS 60
Query: 186 AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPALQ 365
AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+K FTDKQMLRDFVTTRPALQ
Sbjct: 61 AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALQ 120
Query: 366 ELLKEALNMERNN 404
E+L+EALNMERNN
Sbjct: 121 EILREALNMERNN 133
>gb|AAP30718.1| ovarian epithelial carcinoma-related protein [Homo sapiens]
Length = 248
Score = 245 bits (625), Expect = 5e-63
Identities = 123/134 (91%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 104 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 163
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
AETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYFTDKQML DFVTTRPAL
Sbjct: 164 LAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLTDFVTTRPAL 223
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 224 KELLKEALNMERNN 237
>gb|AAB60344.1| ORF1 [Homo sapiens]
Length = 338
Score = 245 bits (625), Expect = 5e-63
Identities = 123/134 (91%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLTADL
Sbjct: 194 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADL 253
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRIS+PAKLSFISEGE KYFTDKQMLRDFVTTRP L
Sbjct: 254 SAETLQARREWGPIFNILKEKNFQPRISFPAKLSFISEGERKYFTDKQMLRDFVTTRPTL 313
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERNN
Sbjct: 314 KELLKEALNMERNN 327
>pdb|2YKP|A Chain A, Structure Of The Human Line-1 Orf1p Trimer
gi|343197091|pdb|2YKP|B Chain B, Structure Of The Human
Line-1 Orf1p Trimer gi|343197092|pdb|2YKP|C Chain C,
Structure Of The Human Line-1 Orf1p Trimer
Length = 229
Score = 244 bits (622), Expect = 1e-62
Identities = 122/134 (91%), Positives = 128/134 (95%)
Frame = +3
Query: 3 NIQIQEIQRTPQRYSSRRATPRHIIVRFTKVKMKEKM*RVPREKGQVTHKGKPIRLTADL 182
N+QIQEIQRTPQRYSSRRATPRHIIVRFTKV+MKEKM R REKG+VT KGKPIRLT DL
Sbjct: 91 NVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTVDL 150
Query: 183 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGELKYFTDKQMLRDFVTTRPAL 362
SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE+KYF DKQMLRDFVTTRPAL
Sbjct: 151 SAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPAL 210
Query: 363 QELLKEALNMERNN 404
+ELLKEALNMERN+
Sbjct: 211 KELLKEALNMERNH 224