BLASTX nr result
ID: Catharanthus22_contig00023263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00023263
(1584 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 7e-15
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera] 48 5e-14
gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protei... 61 4e-13
gb|EOY22292.1| Uncharacterized protein TCM_014510 [Theobroma cacao] 57 8e-13
ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, part... 61 1e-12
ref|XP_004309385.1| PREDICTED: uncharacterized protein LOC101293... 50 4e-12
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part... 54 4e-12
ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, part... 50 7e-12
ref|XP_002317857.1| hypothetical protein POPTR_0012s00280g [Popu... 56 2e-11
ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, part... 48 4e-11
ref|XP_006295736.1| hypothetical protein CARUB_v10024855mg [Caps... 49 7e-11
ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, part... 46 2e-10
ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, part... 50 3e-10
ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, part... 47 3e-10
ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, part... 56 6e-10
ref|XP_006286623.1| hypothetical protein CARUB_v10002432mg, part... 46 6e-10
ref|XP_003630108.1| hypothetical protein MTR_8g091870 [Medicago ... 41 8e-10
ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, part... 46 9e-10
dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like... 47 3e-09
ref|XP_006289412.1| hypothetical protein CARUB_v10002911mg [Caps... 43 3e-09
>emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 678
Score = 62.0 bits (149), Expect(3) = 7e-15
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = -2
Query: 1352 SIKLTRADKHRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIA 1173
+I LT+ +K RI + W N++IIK + + + +L +++ + G++ L +GH +Y+
Sbjct: 121 TIYLTKEEKRRIRHPWRNSLIIKLFDRRLSYDILVRRLKYKWNLKGDIALTDVGHAYYVV 180
Query: 1172 KFQYEEDFLRSIAGGPWFINDQYLTV 1095
+F ED+ + GPW I D YLT+
Sbjct: 181 RFNNMEDYDFVLTQGPWLIGDSYLTI 206
Score = 34.3 bits (77), Expect(3) = 7e-15
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -1
Query: 1044 TVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRAGLLAF 904
T VR+P L VE+++ L +G IGK++++ +T + R + F
Sbjct: 224 TAWVRIPHLSVEYFDKQFLHSIGSKIGKVIKIDRNTESMDRGQYVRF 270
Score = 32.3 bits (72), Expect(3) = 7e-15
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 925 KGWLARICIQVDINTPLIPAVRIGTRHVQLIQYEG 821
+G R CI+VD++ PL+ R+ + V ++QYEG
Sbjct: 264 RGQYVRFCIEVDLSKPLLSKFRLNGK-VWIVQYEG 297
>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
Length = 833
Score = 47.8 bits (112), Expect(3) = 5e-14
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = -2
Query: 1349 IKLTRADKHRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAK 1170
IKL+ +K +S W ++I K + + + +L + G + +I LG+ F++ K
Sbjct: 86 IKLSSTEKENLSAPWKYSLIAKVLGRKVGLQYCQAHLHRLWSLEGTVDIIDLGYGFFLLK 145
Query: 1169 FQYEEDFLRSIAGGPWFINDQYLTV 1095
F D+++ G PW I+ Y+++
Sbjct: 146 FSLPTDYIKVFKGVPWLIHGYYISL 170
Score = 40.4 bits (93), Expect(3) = 5e-14
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
F P A+ + V VRLP LP+E+Y+ +L ++G AIG+ +++ T R
Sbjct: 177 FKPSEATITHAKVWVRLPELPIEYYDKEVLLQIGAAIGRTIKIDPITEKQAR 228
Score = 37.4 bits (85), Expect(3) = 5e-14
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = -3
Query: 925 KGWLARICIQVDINTPLIPAVRIGTRHVQLIQYEGYMFALLVD 797
+G AR+C++VD+ L+P +++G Q I+YEGY+ L D
Sbjct: 228 RGRFARMCVEVDLKHSLLPQIKLGELQ-QKIEYEGYVEQLQQD 269
>gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protein [Theobroma cacao]
Length = 370
Score = 60.8 bits (146), Expect(2) = 4e-13
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = -2
Query: 1349 IKLTRADKHRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAK 1170
I+L++ DK RI W NA I+K + I L +V+QL + G+ +++ L + FY +
Sbjct: 67 IRLSKEDKRRIRRPWRNAFIVKLLGRNINYTYLCIRVKQLWSLIGDFQVVDLDNGFYCVR 126
Query: 1169 FQYEEDFLRSIAGGPWFINDQYLT 1098
F + DF + GPWFI YL+
Sbjct: 127 FSNKSDFDHVLTEGPWFIAGHYLS 150
Score = 42.4 bits (98), Expect(2) = 4e-13
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = -1
Query: 1062 ASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
AS + +RLPG+P+E+Y+ IL R+G+ +GK ++V T + R
Sbjct: 164 ASVDSIAAWIRLPGMPLEYYDSGILSRIGNELGKTLKVDRTTAYASR 210
>gb|EOY22292.1| Uncharacterized protein TCM_014510 [Theobroma cacao]
Length = 593
Score = 57.4 bits (137), Expect(2) = 8e-13
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = -2
Query: 1349 IKLTRADKHRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAK 1170
I+ TR +K RI W N +I+K + I L +V+Q+ + G+ + + L + Y +
Sbjct: 152 IQFTREEKLRIWKPWKNTLIVKLLGRNISYTYLCTRVKQMWALLGDFQAVDLENGLYCFR 211
Query: 1169 FQYEEDFLRSIAGGPWFINDQYLTV 1095
F + D+L+ + GPW I D YLTV
Sbjct: 212 FDNKSDYLQVLTDGPWIIADHYLTV 236
Score = 44.7 bits (104), Expect(2) = 8e-13
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRAGLLA 907
F AS + V LPG+P+E+Y+ IL+++GD IGK V++ TT+S+ G A
Sbjct: 243 FRSDEASVESVATWVCLPGMPLEYYDREILDKIGDRIGKSVKID-RTTSSQSKGKFA 298
>ref|XP_006382338.1| hypothetical protein POPTR_0005s01170g, partial [Populus trichocarpa]
gi|550337696|gb|ERP60135.1| hypothetical protein
POPTR_0005s01170g, partial [Populus trichocarpa]
Length = 270
Score = 61.2 bits (147), Expect(2) = 1e-12
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = -2
Query: 1349 IKLTRADKHRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAK 1170
I+L +K RI W +IIK + L +++ + K+ G++ L+ LG+DF++A+
Sbjct: 59 IRLFMEEKKRIREPWRQTLIIKVLGCRVSYTFLLKRLQIIWKIQGDLNLVDLGNDFFLAR 118
Query: 1169 FQYEEDFLRSIAGGPWFINDQYLTV 1095
F +ED +++GGPW + D YLT+
Sbjct: 119 FSNKEDRESAMSGGPWMVADHYLTM 143
Score = 40.4 bits (93), Expect(2) = 1e-12
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTT 934
F+P +A+ V +RLP L +E+Y+ +L ++G+ IGK ++V T+
Sbjct: 150 FDPNVATIEKVAVWIRLPDLAMEYYDNTVLWKIGNHIGKTLKVDRTTS 197
>ref|XP_004309385.1| PREDICTED: uncharacterized protein LOC101293944, partial [Fragaria
vesca subsp. vesca]
Length = 328
Score = 49.7 bits (117), Expect(4) = 4e-12
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = -2
Query: 1325 HRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*K---VAGEMRLIYLGHDFYIAKFQYEE 1155
+++ + W+ ++IIK KP + D+ ++ L + G +L+ L +D++I KF E+
Sbjct: 32 NKLDFGWHCSVIIKLMGKPNSTNTFDFILKSLRRKWQTKGGWQLVDLPNDYFIVKFNLED 91
Query: 1154 DFLRSIAGGPWFINDQYLTV 1095
D + GGPW I Q L V
Sbjct: 92 DMNEVLCGGPWIIAGQTLIV 111
Score = 36.6 bits (83), Expect(4) = 4e-12
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 1083 SKFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
S FNP+ + +R+ GLPV+F+ +E++G +G +V+V T R
Sbjct: 116 SDFNPETDVIGKMALWIRICGLPVKFFKPYAIEKIGKILGDVVKVDPITLGQAR 169
Score = 27.7 bits (60), Expect(4) = 4e-12
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 925 KGWLARICIQVDINTPLIPAVRIGTRHVQLIQYEG 821
+G AR+C++VD+ PL P + + +I YEG
Sbjct: 169 RGKFARVCVEVDLGKPLKPFAEMESVAYSVI-YEG 202
Score = 24.3 bits (51), Expect(4) = 4e-12
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 20/65 (30%)
Frame = -2
Query: 809 FTSGCMGHMEIECPT--KEPPL-PSKED----------KGKKIMVKE-------ESFVKD 690
F GC GH + +CP+ P + PS D G M E S +KD
Sbjct: 208 FECGCFGHSKDKCPSIIVSPAVNPSSGDPNCSSATSNSAGNVEMTNEMEARNETPSVIKD 267
Query: 689 ELGAW 675
++G W
Sbjct: 268 DMGTW 272
>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
gi|482547819|gb|EOA12095.1| hypothetical protein
CARUB_v10016517mg, partial [Capsella rubella]
Length = 457
Score = 53.9 bits (128), Expect(3) = 4e-12
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W II+K + I L K+++L K GEM ++ L F++ +F+ EE++L ++ GG
Sbjct: 73 WKQCIIVKVLGRSIVLSALSRKLKELWKPTGEMSVVDLPRQFFMIRFEREEEYLAALTGG 132
Query: 1127 PWFINDQYLTVHICNRSLIP 1068
PW + +L V + P
Sbjct: 133 PWRVFGSHLMVQAWSSDFNP 152
Score = 41.2 bits (95), Expect(3) = 4e-12
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = -1
Query: 1083 SKFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
S FNP TT V VRL LPV FY+ IL + +GK ++V + T N +RA
Sbjct: 148 SDFNPLRDDIVTTPVWVRLSNLPVFFYHQDILLGIASGLGKPIKVDVTTLNFERA 202
Score = 23.9 bits (50), Expect(3) = 4e-12
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
++ AR+C++++++ P+ +V I G R+ + YEG
Sbjct: 200 ERARFARVCVEINLSKPVKGSVMINGDRY--YVAYEG 234
>ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, partial [Capsella rubella]
gi|482561732|gb|EOA25923.1| hypothetical protein
CARUB_v10019305mg, partial [Capsella rubella]
Length = 361
Score = 50.1 bits (118), Expect(3) = 7e-12
Identities = 21/71 (29%), Positives = 41/71 (57%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W +I+K + + +L K+R++ + G M ++ L F++ +F+ E+++L ++ GG
Sbjct: 77 WKQCMIVKVLGRHVSIAVLLKKLREMWRPKGAMYVVDLPRQFFMVRFELEDEYLEALTGG 136
Query: 1127 PWFINDQYLTV 1095
PW I YL V
Sbjct: 137 PWRIFGSYLMV 147
Score = 40.4 bits (93), Expect(3) = 7e-12
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = -1
Query: 1086 QSKFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
+ +F+P TT V +RL +PV FY+ +L R+ +GK V+V + T N +R
Sbjct: 151 EPEFDPMTDEIVTTPVWIRLSNIPVNFYHKRLLMRLARGLGKPVKVDLTTMNFER 205
Score = 27.7 bits (60), Expect(3) = 7e-12
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
++G ARIC+ V++ PL ++ I G+R+ + YEG
Sbjct: 204 ERGRFARICVDVNLKKPLKGSILINGSRY--FVSYEG 238
>ref|XP_002317857.1| hypothetical protein POPTR_0012s00280g [Populus trichocarpa]
gi|222858530|gb|EEE96077.1| hypothetical protein
POPTR_0012s00280g [Populus trichocarpa]
Length = 288
Score = 56.2 bits (134), Expect(3) = 2e-11
Identities = 29/100 (29%), Positives = 53/100 (53%)
Frame = -2
Query: 1370 SRPCHSSIKLTRADKHRISYYWNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLG 1191
++P S+ L + Y W +++I+K K I ++ +++++ A L+ +G
Sbjct: 80 TKPAPPSVHLDDKVFTELCYPWCDSLIVKLLGKNIGYTQMNIRLKKVWNFAKGFELMDVG 139
Query: 1190 HDFYIAKFQYEEDFLRSIAGGPWFINDQYLTVHICNRSLI 1071
H F++ KF E D ++ + GGPW I D YLTV + S +
Sbjct: 140 HGFFMVKFNQEMDRMKVMNGGPWMILDHYLTVRTWSPSFV 179
Score = 33.5 bits (75), Expect(3) = 2e-11
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -1
Query: 1077 FNPQIASTST----TTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
++P ST+ T V R+P L V FY+ + L + A+G ++V M+T N R
Sbjct: 174 WSPSFVSTTAKIDWTLVWARIPDLNVVFYDEIFLLALASALGTPIKVDMNTVNVTR 229
Score = 26.9 bits (58), Expect(3) = 2e-11
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 925 KGWLARICIQVDINTPLIPAVRI 857
+G ARICI+VD++ P++ V I
Sbjct: 229 RGKFARICIEVDLDKPVVGKVWI 251
>ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, partial [Capsella rubella]
gi|482554312|gb|EOA18505.1| hypothetical protein
CARUB_v10007057mg, partial [Capsella rubella]
Length = 394
Score = 47.8 bits (112), Expect(3) = 4e-11
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W N +++K + I +L ++R + + +M ++ L F++ +F+ EE+++ ++ GG
Sbjct: 77 WKNCMVVKVLGRNITIAVLSRRLRDMWNPSRDMFVLDLPRQFFMVRFESEEEYMAALTGG 136
Query: 1127 PWFINDQYL 1101
PW I YL
Sbjct: 137 PWKIFGSYL 145
Score = 42.7 bits (99), Expect(3) = 4e-11
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
F+P +TT V VRL +PV FY+ ILE + +GK ++V + TT +RA
Sbjct: 154 FDPIRDEITTTPVWVRLSNIPVTFYHTSILEEIARGLGKPLKVDLTTTKLERA 206
Score = 25.0 bits (53), Expect(3) = 4e-11
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
++ AR+C++V++ PL V I G R+ + YEG
Sbjct: 204 ERARFARVCVEVNLKKPLKGTVMINGERY--YVSYEG 238
>ref|XP_006295736.1| hypothetical protein CARUB_v10024855mg [Capsella rubella]
gi|482564444|gb|EOA28634.1| hypothetical protein
CARUB_v10024855mg [Capsella rubella]
Length = 479
Score = 49.3 bits (116), Expect(3) = 7e-11
Identities = 21/67 (31%), Positives = 41/67 (61%)
Frame = -2
Query: 1295 IIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGGPWFI 1116
+I+K K I + +++++ K G M ++ L F++A+F++EE++L ++ GGPW +
Sbjct: 70 MIVKVLGKNISIAAMSRRLKEMWKPKGAMHVLDLPRQFFMARFEHEEEYLEALTGGPWRM 129
Query: 1115 NDQYLTV 1095
YL V
Sbjct: 130 FGSYLMV 136
Score = 37.0 bits (84), Expect(3) = 7e-11
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = -1
Query: 1080 KFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTN 931
+F+P TT VLVR+ +PV FY+ +IL + +G+ ++V ++T N
Sbjct: 142 EFDPVRHEIMTTPVLVRVSNIPVIFYHKMILMGMAQGLGRPLKVDLNTMN 191
Score = 28.5 bits (62), Expect(3) = 7e-11
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 913 ARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
ARIC++VD+ PL A+ I G R+ + YEG
Sbjct: 198 ARICVEVDLRKPLKGAIMINGDRY--FVSYEG 227
>ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, partial [Capsella rubella]
gi|482555545|gb|EOA19737.1| hypothetical protein
CARUB_v10003838mg, partial [Capsella rubella]
Length = 391
Score = 45.8 bits (107), Expect(3) = 2e-10
Identities = 17/71 (23%), Positives = 42/71 (59%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W +I+K + + +L ++++L + + +M ++ L F++ +F+ ++++L ++ GG
Sbjct: 77 WKRCMIVKVLGRNVPVAVLSRRLKELWRPSRDMVVVDLPRQFFMVRFESDDEYLAALTGG 136
Query: 1127 PWFINDQYLTV 1095
PW + YL V
Sbjct: 137 PWKVFGSYLMV 147
Score = 42.4 bits (98), Expect(3) = 2e-10
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
F+P T V VRL +PV FY+ IL + + +GK ++V + TTN RA
Sbjct: 154 FDPVRDELEMTPVWVRLSNIPVSFYHTTILMGIAEGLGKPIKVDLTTTNFSRA 206
Score = 25.0 bits (53), Expect(3) = 2e-10
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 913 ARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
AR+C++V++ PL +V I G R+ + YEG
Sbjct: 209 ARVCVEVNLKMPLKGSVMINGERY--YVSYEG 238
>ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, partial [Capsella rubella]
gi|482561670|gb|EOA25861.1| hypothetical protein
CARUB_v10019240mg, partial [Capsella rubella]
Length = 405
Score = 50.4 bits (119), Expect(3) = 3e-10
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W +I+K + I + K+R+L K G M + L F++ +F EE+++ ++ GG
Sbjct: 45 WKRCMIVKVLGRNIPIAAMSRKLRELWKPKGAMHVTDLPRQFFMVRFDMEEEYMEALTGG 104
Query: 1127 PWFINDQYLTV 1095
PW + YL V
Sbjct: 105 PWKVFGSYLMV 115
Score = 38.5 bits (88), Expect(3) = 3e-10
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
F+P +TT V VRL +P+ FY+ IL + + +GK ++V + T N RA
Sbjct: 122 FDPMRDEITTTPVWVRLSNIPMLFYHRQILMGIAEGLGKPLKVDLTTQNLDRA 174
Score = 23.9 bits (50), Expect(3) = 3e-10
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -3
Query: 913 ARICIQVDINTPLIPAVRIGTRHVQLIQYEG 821
AR+C++V++ PL + + + YEG
Sbjct: 177 ARVCVEVNLKKPLKGTIMVNDERF-FVSYEG 206
>ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, partial [Capsella rubella]
gi|482565486|gb|EOA29675.1| hypothetical protein
CARUB_v10015822mg, partial [Capsella rubella]
Length = 333
Score = 46.6 bits (109), Expect(3) = 3e-10
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W N +++K + + L ++R+L K G M ++ L F++ +F E D++ + GG
Sbjct: 74 WKNCMLVKVLDRHVPIAALSKRLRELWKPTGGMSVLDLPRQFFMVRFDNEADYMAVMTGG 133
Query: 1127 PWFINDQYLTVHICNRSLIPK 1065
PW + L V + S P+
Sbjct: 134 PWRLFGSVLMVQAWSPSFDPQ 154
Score = 38.1 bits (87), Expect(3) = 3e-10
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
F+PQ TT V VR+ LPV FY+ IL + + +GK + V + T +RA
Sbjct: 151 FDPQHDEIRTTPVWVRVSKLPVLFYHKAILMGIAEGLGKPLRVDLTTFRFERA 203
Score = 27.7 bits (60), Expect(3) = 3e-10
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
++ ARIC++VD+ PL +V + G R+ + YEG
Sbjct: 201 ERARFARICVEVDLTQPLKGSVMVNGDRY--FVSYEG 235
>ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, partial [Capsella rubella]
gi|482564485|gb|EOA28675.1| hypothetical protein
CARUB_v10024899mg, partial [Capsella rubella]
Length = 451
Score = 56.2 bits (134), Expect(3) = 6e-10
Identities = 24/71 (33%), Positives = 44/71 (61%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W N +I+K + I +L+ K+++L K +G M ++ L F++ +F+ EE++L ++ GG
Sbjct: 77 WKNCMIVKVLGRQIPVAVLNRKLKELWKPSGRMYVMDLPRHFFMVRFELEEEYLNALTGG 136
Query: 1127 PWFINDQYLTV 1095
PW + YL V
Sbjct: 137 PWRVFGNYLMV 147
Score = 33.1 bits (74), Expect(3) = 6e-10
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
F+P TT V VRL +PV +Y+ IL + + +G + V + T + +RA
Sbjct: 154 FDPLKDDIVTTPVWVRLMNIPVWYYHKSILMAIAEGVGTPLRVDLTTLSLERA 206
Score = 22.3 bits (46), Expect(3) = 6e-10
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRIGTRHVQLIQYEG 821
++ AR+C++V+++ PL + I + YEG
Sbjct: 204 ERARFARVCVEVNLSEPLKGTLLINGEWF-FVAYEG 238
>ref|XP_006286623.1| hypothetical protein CARUB_v10002432mg, partial [Capsella rubella]
gi|482555329|gb|EOA19521.1| hypothetical protein
CARUB_v10002432mg, partial [Capsella rubella]
Length = 450
Score = 46.2 bits (108), Expect(3) = 6e-10
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W + +I+K + + L K+R+L K +G M ++ L F++ +F + D+L ++ GG
Sbjct: 74 WKHCLIVKVLGRHVPIAALVRKLRELLKPSGGMYVVDLPKQFFLVRFDNKADYLAAVTGG 133
Query: 1127 PWFINDQYLTV 1095
PW + L V
Sbjct: 134 PWRLFGSILMV 144
Score = 41.2 bits (95), Expect(3) = 6e-10
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = -1
Query: 1080 KFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
+F+P TT V VR+ LPV Y+ VIL +V A+GK + V M T RA
Sbjct: 150 EFDPLKDEIVTTPVWVRISSLPVNLYHKVILSKVSGALGKPLRVDMTTLQLNRA 203
Score = 24.3 bits (51), Expect(3) = 6e-10
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 913 ARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
AR+C++V++ PL +V + G R+ + YEG
Sbjct: 206 ARVCVEVNLKKPLKGSVLVNGERYA--VAYEG 235
>ref|XP_003630108.1| hypothetical protein MTR_8g091870 [Medicago truncatula]
gi|355524130|gb|AET04584.1| hypothetical protein
MTR_8g091870 [Medicago truncatula]
Length = 423
Score = 40.8 bits (94), Expect(4) = 8e-10
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W +A+++K K + + ++ ++ K G ++ + FY+ KF D + I GG
Sbjct: 35 WKDALVVKLLRKNLGYNTMKERLHKVWKTQGGFEIMDNDNGFYMVKFDQTSDKEKVITGG 94
Query: 1127 PWFINDQYLTV 1095
PW I D + V
Sbjct: 95 PWMIFDHCMVV 105
Score = 35.8 bits (81), Expect(4) = 8e-10
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 1095 AHLQSKFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
AH +F A T V VR PGL + +Y+ L + AIG+ ++V +T N +R
Sbjct: 106 AHWSPEFASPNAKVERTVVWVRFPGLNLVYYDENFLLAMASAIGRPIKVDTNTLNVER 163
Score = 29.3 bits (64), Expect(4) = 8e-10
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRIGTRHVQLIQYE 824
++G AR+C+++D+ P++ + + H IQYE
Sbjct: 162 ERGKFARVCVEIDLTAPVVGKIWV-NGHWYKIQYE 195
Score = 24.3 bits (51), Expect(4) = 8e-10
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Frame = -2
Query: 815 VCFTSGCMGHMEIECPTKEPPL-PSKEDKGKK----IMVKEESFVKDELGAWNTVTPEFW 651
+C GC GH+ C K L + +G + + + + G W VT +
Sbjct: 200 ICTNCGCCGHLRRNCSQKSTTLHQAAATQGSSHPPVSTQRNDEEINEFYGDWMLVTRKKK 259
Query: 650 SPATYQQSGGNQASTSNH 597
S QSG Q S + H
Sbjct: 260 S-----QSGPTQNSKNVH 272
>ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, partial [Capsella rubella]
gi|482564602|gb|EOA28792.1| hypothetical protein
CARUB_v10025024mg, partial [Capsella rubella]
Length = 507
Score = 45.8 bits (107), Expect(3) = 9e-10
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W N +I+K + + L K+R+L G M +I L F++ +F+ E+D++ + GG
Sbjct: 95 WKNCMIVKVLGRNVPLAPLLRKLRELWAPKGGMTVIDLPRQFFLVRFELEDDYMGVVTGG 154
Query: 1127 PW 1122
PW
Sbjct: 155 PW 156
Score = 40.0 bits (92), Expect(3) = 9e-10
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
FNP TT V VR+ LPV +Y+ IL + +A+GK + + T +RA
Sbjct: 172 FNPMQDEIETTPVWVRISNLPVHYYHKTILMGIAEALGKPLRADLTTLQVERA 224
Score = 25.0 bits (53), Expect(3) = 9e-10
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
++ AR+CI+V++ PL +V + G R+ + YEG
Sbjct: 222 ERARFARVCIEVNLKKPLKGSVMVNGERY--MASYEG 256
>dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 591
Score = 47.4 bits (111), Expect(3) = 3e-09
Identities = 17/62 (27%), Positives = 37/62 (59%)
Frame = -2
Query: 1307 WNNAIIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGG 1128
W + +K + + + +++R++ K +G M ++ L F++ +F+ EE+FL ++ GG
Sbjct: 77 WKQCMFVKVLGRKVSLAAVSHRLREMWKPSGAMYVLDLPRHFFMVRFEKEEEFLTALTGG 136
Query: 1127 PW 1122
PW
Sbjct: 137 PW 138
Score = 33.5 bits (75), Expect(3) = 3e-09
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -1
Query: 1080 KFNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKR 922
+FNP TT + VR+ +PV FY+ IL V +G+ ++V + + +R
Sbjct: 153 EFNPLKDEIVTTPIWVRIADMPVSFYHKSILMSVAQGLGRPLKVDLTMLHFER 205
Score = 28.5 bits (62), Expect(3) = 3e-09
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 928 QKGWLARICIQVDINTPLIPAVRI-GTRHVQLIQYEG 821
++G AR+C++VD+ PL A+ + G R+ + YEG
Sbjct: 204 ERGRFARVCVEVDLKRPLQGALLVNGDRY--YVAYEG 238
>ref|XP_006289412.1| hypothetical protein CARUB_v10002911mg [Capsella rubella]
gi|482558118|gb|EOA22310.1| hypothetical protein
CARUB_v10002911mg [Capsella rubella]
Length = 474
Score = 42.7 bits (99), Expect(3) = 3e-09
Identities = 16/67 (23%), Positives = 41/67 (61%)
Frame = -2
Query: 1295 IIIKPYWKPIRSGLLDYKVRQL*KVAGEMRLIYLGHDFYIAKFQYEEDFLRSIAGGPWFI 1116
+I+K + + +L +++++ K + +M ++ L F++ +F+ E++++ ++ GGPW +
Sbjct: 64 MIVKVLGRTVPVAVLSRRLKEMWKPSRDMVVVDLPRQFFMVRFESEDEYMAALTGGPWRV 123
Query: 1115 NDQYLTV 1095
YL V
Sbjct: 124 FGSYLMV 130
Score = 42.0 bits (97), Expect(3) = 3e-09
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1
Query: 1077 FNPQIASTSTTTVLVRLPGLPVEFYNCVILERVGDAIGKLVEVHMHTTNSKRA 919
F+P TT V VRL LPV FY+ IL + + +GK ++V + T N RA
Sbjct: 137 FDPIRDEIETTPVWVRLSNLPVSFYHTTILMGIAEGLGKPIKVDITTMNLTRA 189
Score = 24.3 bits (51), Expect(3) = 3e-09
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 913 ARICIQVDINTPLIPAVRIGTRHVQLIQYEG 821
AR+C++V++ PL V I + YEG
Sbjct: 192 ARVCVEVNLKMPLKGTVMINEER-YYVSYEG 221