BLASTX nr result

ID: Catharanthus22_contig00023072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00023072
         (302 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356447.1| PREDICTED: uncharacterized protein LOC102594...    63   4e-08
ref|XP_004239116.1| PREDICTED: putative late blight resistance p...    58   1e-06
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]                    58   1e-06
gb|AAC49408.1| PRF [Solanum lycopersicum]                              58   1e-06
gb|AAF76308.1| Prf [Solanum pimpinellifolium]                          58   1e-06
ref|XP_006348601.1| PREDICTED: putative late blight resistance p...    57   3e-06

>ref|XP_006356447.1| PREDICTED: uncharacterized protein LOC102594363 [Solanum tuberosum]
          Length = 2035

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
 Frame = +2

Query: 41   MSYAEEIEKILKLLPNLMELKALF-----YNPDGGQYNFPKLDFLKKLESLEVTHRNRFS 205
            +S  E+ EKIL+ +PNL +L+ +      Y+  G    FP+LDFL +LESL++   +  +
Sbjct: 1822 LSSGEDAEKILRSMPNLRKLRCIVEGLLGYSTKGSIVRFPRLDFLHQLESLKLLSYSYPT 1881

Query: 206  KDPCNIKNRFPKGLKKLVLSNFHLLWTEI 292
            K P      FP  L++L LSNF L WT+I
Sbjct: 1882 KHPHEF--NFPLNLRELTLSNFRLPWTQI 1908


>ref|XP_004239116.1| PREDICTED: putative late blight resistance protein homolog
            R1B-17-like [Solanum lycopersicum]
          Length = 1825

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
 Frame = +2

Query: 17   LRTLYHLKMSYAEEIEKILKLLPNLMELKALFYNPDGGQ-------YNFPKLDFLKKLES 175
            L T    ++ Y ++ EKIL+ +P L +L  +F    G           FP+LDFL  LES
Sbjct: 1599 LETFSTPRLFYGKDAEKILRKMPKLRKLSCIFSGTFGYSRKLKGRCVRFPRLDFLSHLES 1658

Query: 176  LEVTHRNRFSKDPCNIKNRFPKGLKKLVLSNFHLLWTEIS 295
            L++   +  +K P   K  FP  L++L LS F L WT+IS
Sbjct: 1659 LKLVSNSYPAKLPH--KFNFPSQLRELTLSKFRLPWTQIS 1696


>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
          Length = 1825

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
 Frame = +2

Query: 17   LRTLYHLKMSYAEEIEKILKLLPNLMELKALFYNPDGGQ-------YNFPKLDFLKKLES 175
            L T    ++ Y ++ EKIL+ +P L +L  +F    G           FP+LDFL  LES
Sbjct: 1599 LETFSTPRLFYGKDAEKILRKMPKLRKLSCIFSGTFGYSRKLKGRCVRFPRLDFLSHLES 1658

Query: 176  LEVTHRNRFSKDPCNIKNRFPKGLKKLVLSNFHLLWTEIS 295
            L++   +  +K P   K  FP  L++L LS F L WT+IS
Sbjct: 1659 LKLVSNSYPAKLPH--KFNFPSQLRELTLSKFRLPWTQIS 1696


>gb|AAC49408.1| PRF [Solanum lycopersicum]
          Length = 1824

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
 Frame = +2

Query: 17   LRTLYHLKMSYAEEIEKILKLLPNLMELKALFYNPDGGQ-------YNFPKLDFLKKLES 175
            L T    ++ Y ++ EK+L+ +P L +L  +F    G           FP+LDFL  LES
Sbjct: 1598 LETFSTPRLFYGKDAEKVLRKMPKLRKLSCIFSGTFGYSRKLKGRCVRFPRLDFLSHLES 1657

Query: 176  LEVTHRNRFSKDPCNIKNRFPKGLKKLVLSNFHLLWTEIS 295
            L++   +  +K P   K  FP  L++L LS F L WT+IS
Sbjct: 1658 LKLVSNSYPAKLPH--KFNFPSQLRELTLSKFRLPWTQIS 1695


>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
          Length = 1824

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
 Frame = +2

Query: 17   LRTLYHLKMSYAEEIEKILKLLPNLMELKALFYNPDGGQ-------YNFPKLDFLKKLES 175
            L T    ++ Y ++ EK+L+ +P L +L  +F    G           FP+LDFL  LES
Sbjct: 1598 LETFSTPRLFYGKDAEKVLRKMPKLRKLSCIFSGTFGYSRKLKGRCVRFPRLDFLSHLES 1657

Query: 176  LEVTHRNRFSKDPCNIKNRFPKGLKKLVLSNFHLLWTEIS 295
            L++   +  +K P   K  FP  L++L LS F L WT+IS
Sbjct: 1658 LKLVSNSYPAKLPH--KFNFPSQLRELTLSKFRLPWTQIS 1695


>ref|XP_006348601.1| PREDICTED: putative late blight resistance protein homolog
            R1B-16-like [Solanum tuberosum]
          Length = 1733

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
 Frame = +2

Query: 17   LRTLYHLKMSYAEEIEKILKLLPNLMELKALFYNP-------DGGQYNFPKLDFLKKLES 175
            L T    ++SY ++ E IL  +PNL +L  +F           G    FP+L+FL  LES
Sbjct: 1509 LETFSTPRLSYGKDAETILAKMPNLRKLSCIFLETFSYSEKLKGRCVLFPRLEFLSHLES 1568

Query: 176  LEVTHRNRFSKDPCNIKNRFPKGLKKLVLSNFHLLWTEIS 295
            +++   +  SK P      FP  LK+L LS F L W+EIS
Sbjct: 1569 VKLVSNSYPSKLPHEFN--FPSKLKELTLSKFRLPWSEIS 1606


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