BLASTX nr result

ID: Catharanthus22_contig00022637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00022637
         (363 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD39695.1| fibrillin 8 [Coffea canephora]                          70   4e-10
ref|XP_002301454.2| plastid-lipid associated protein PAP [Populu...    55   7e-06
ref|XP_004245278.1| PREDICTED: probable plastid-lipid-associated...    55   1e-05

>gb|ABD39695.1| fibrillin 8 [Coffea canephora]
          Length = 279

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
 Frame = +2

Query: 131 CSALAMRAFFPFAKPRASNPVASIQRRSVHSLRCSAGV-----RKVQTELEDRKCQLLSL 295
           CSA  +RA  PF K     P +S        LR SA V     R  +TELED+K +LL +
Sbjct: 9   CSAAVIRAI-PFKKSLVPTPNSSTNVHHPKVLRYSATVGLSPRRDAETELEDKKYELLRV 67

Query: 296 IQDTQRGLVTTTEQRSSIEEAL 361
           IQDTQRGLVTT +QRSSIEEAL
Sbjct: 68  IQDTQRGLVTTADQRSSIEEAL 89


>ref|XP_002301454.2| plastid-lipid associated protein PAP [Populus trichocarpa]
           gi|550345309|gb|EEE80727.2| plastid-lipid associated
           protein PAP [Populus trichocarpa]
          Length = 344

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
 Frame = +2

Query: 113 MAVSFSCS---ALAMRAFFPFAKPRASNPVASIQRRSVHSLRCSAGV------RKVQTEL 265
           M ++F+ S   A   R  F    P   N           +  CSA V      R  + E+
Sbjct: 1   MNMAFATSLYPATGKRPIFKIINPFTCNAATRRNLTVRRNFSCSATVATDITARVSEFEI 60

Query: 266 EDRKCQLLSLIQDTQRGLVTTTEQRSSIEEAL 361
           E++K  LL L+QDTQRGLVTT +QRSSIEEAL
Sbjct: 61  ENKKNDLLRLVQDTQRGLVTTPDQRSSIEEAL 92


>ref|XP_004245278.1| PREDICTED: probable plastid-lipid-associated protein 10,
           chloroplastic-like [Solanum lycopersicum]
          Length = 274

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = +2

Query: 245 RKVQTELEDRKCQLLSLIQDTQRGLVTTTEQRSSIEEAL 361
           R  + ELE+RK +LL++IQDTQRGLVTT +QRS+IEEA+
Sbjct: 46  RDAEYELENRKYELLNIIQDTQRGLVTTADQRSTIEEAM 84


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