BLASTX nr result
ID: Catharanthus22_contig00022610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00022610
(200 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 95 1e-17
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_004290462.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_004238502.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_002306730.2| pentatricopeptide repeat-containing family p... 93 4e-17
ref|XP_006359053.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17
ref|XP_006473158.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_006434562.1| hypothetical protein CICLE_v10003512mg [Citr... 92 7e-17
gb|EMJ00471.1| hypothetical protein PRUPE_ppa022734mg [Prunus pe... 92 7e-17
emb|CBI29340.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EOY17416.1| Tetratricopeptide repeat (TPR)-like superfamily p... 89 5e-16
gb|EPS70180.1| hypothetical protein M569_04582 [Genlisea aurea] 89 8e-16
ref|XP_004515953.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|ESW03397.1| hypothetical protein PHAVU_011G010900g [Phaseolus... 79 8e-13
gb|EXC75282.1| hypothetical protein L484_000391 [Morus notabilis] 78 1e-12
ref|XP_004959633.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ... 76 5e-12
ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/66 (59%), Positives = 54/66 (81%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F MHGDG KAL+LF+ +G+ G+S D+VSYLA +CACNH G+V++GLKLF SM + G++
Sbjct: 282 FAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPN 341
Query: 18 VKHYGT 1
+KHYG+
Sbjct: 342 IKHYGS 347
>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/66 (59%), Positives = 54/66 (81%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F MHGDG KAL+LF+ +G+ G+S D+VSYLA +CACNH G+V++GLKLF SM + G++
Sbjct: 282 FAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPN 341
Query: 18 VKHYGT 1
+KHYG+
Sbjct: 342 IKHYGS 347
>ref|XP_004290462.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Fragaria vesca subsp. vesca]
Length = 576
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F +HGD KALELFQ MG+ G+ AD+VSYLA +CACNHGG+VD G+KLF SM G+
Sbjct: 281 FAIHGDCEKALELFQKMGRNGVRADAVSYLAVLCACNHGGLVDYGVKLFNSMAGGGMVPN 340
Query: 18 VKHYGT 1
VKHYGT
Sbjct: 341 VKHYGT 346
>ref|XP_004238502.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Solanum lycopersicum]
Length = 574
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = -3
Query: 192 MHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKTVK 13
++GDG +ALELF+ MG+ G+ DSVSYLAA+CACNH GMV+EG+KLF+ M GV K VK
Sbjct: 281 IYGDGEQALELFERMGQAGIDPDSVSYLAAICACNHAGMVEEGMKLFDDMDRCGVSKNVK 340
Query: 12 HYGT 1
HYG+
Sbjct: 341 HYGS 344
>ref|XP_002306730.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550339513|gb|EEE93726.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 577
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F MHG+G KALELF+ M + G+S D VSYLA +CACNHGG+V+EG +LF SM GV
Sbjct: 283 FAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPN 342
Query: 18 VKHYGT 1
VKHYG+
Sbjct: 343 VKHYGS 348
>ref|XP_006359053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Solanum tuberosum]
Length = 574
Score = 92.4 bits (228), Expect = 5e-17
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = -3
Query: 192 MHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKTVK 13
M+GDG +ALELF+ M + G+ DSVSYLAA+CACNH GMV+EG+KLF+ M GV K VK
Sbjct: 281 MYGDGEQALELFERMSQAGIDPDSVSYLAAICACNHAGMVEEGMKLFDDMDRCGVSKNVK 340
Query: 12 HYGT 1
HYG+
Sbjct: 341 HYGS 344
>ref|XP_006473158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Citrus sinensis]
Length = 582
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F +HGDG +ALELF+ MG+ G+ D VSYLAA+CACNH G+VD+G++LF SM GV
Sbjct: 287 FAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPN 346
Query: 18 VKHYGT 1
+KHYG+
Sbjct: 347 MKHYGS 352
>ref|XP_006434562.1| hypothetical protein CICLE_v10003512mg [Citrus clementina]
gi|557536684|gb|ESR47802.1| hypothetical protein
CICLE_v10003512mg [Citrus clementina]
Length = 582
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F +HGDG +ALELF+ MG+ G+ D VSYLAA+CACNH G+VD+G++LF SM GV
Sbjct: 287 FAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPN 346
Query: 18 VKHYGT 1
+KHYG+
Sbjct: 347 MKHYGS 352
>gb|EMJ00471.1| hypothetical protein PRUPE_ppa022734mg [Prunus persica]
Length = 576
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F MHGDG KALELF M K G+ D+VSYLAA+CACNH G+V++G++LF SM GV
Sbjct: 281 FAMHGDGGKALELFGEMAKSGVCPDAVSYLAALCACNHAGLVEDGVRLFNSMEVQGVSPN 340
Query: 18 VKHYGT 1
VKHYGT
Sbjct: 341 VKHYGT 346
>emb|CBI29340.3| unnamed protein product [Vitis vinifera]
Length = 434
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F MHGDG +ALELF+ MGK + DSV+YLA +CACNH G+V+EG++LF+ M GV++
Sbjct: 214 FAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGRGVNRN 273
Query: 18 VKHYGT 1
VKHYG+
Sbjct: 274 VKHYGS 279
>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F MHGDG +ALELF+ MGK + DSV+YLA +CACNH G+V+EG++LF+ M GV++
Sbjct: 278 FAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGRGVNRN 337
Query: 18 VKHYGT 1
VKHYG+
Sbjct: 338 VKHYGS 343
>gb|EOY17416.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 574
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F M GDG KALELF+ M GL D+V+YLA +CACNH G+V++GL+LF +MG +GV
Sbjct: 279 FAMDGDGHKALELFEQMDGAGLQPDAVTYLAVLCACNHAGLVEDGLRLFNTMGRHGVQPN 338
Query: 18 VKHYGT 1
VKHYG+
Sbjct: 339 VKHYGS 344
>gb|EPS70180.1| hypothetical protein M569_04582 [Genlisea aurea]
Length = 577
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F + GDGV AL LF+L+ GL D V+YLAA+CACNH GMVDEGL LFE M + GV +
Sbjct: 282 FAIDGDGVNALRLFRLVEGRGLKPDGVTYLAALCACNHSGMVDEGLDLFEKMEKNGVFRN 341
Query: 18 VKHYGT 1
+KHYGT
Sbjct: 342 MKHYGT 347
>ref|XP_004515953.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cicer arietinum]
Length = 577
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F M+GDG KAL+L M +G D+VSYLAA+CACNH G+VDEG++LF+SM GV
Sbjct: 282 FAMNGDGYKALDLLDGMFLDGTCPDAVSYLAALCACNHAGLVDEGVRLFDSMKVSGVKLN 341
Query: 18 VKHYGT 1
VKHYG+
Sbjct: 342 VKHYGS 347
>gb|ESW03397.1| hypothetical protein PHAVU_011G010900g [Phaseolus vulgaris]
Length = 577
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -3
Query: 192 MHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKTVK 13
M+GDG +ALEL M +G+ D+VSYL A+CACNH G+V+EG+KLF++M GV VK
Sbjct: 284 MNGDGNQALELLDKMVVDGVVPDAVSYLGALCACNHAGLVEEGVKLFDTMKGCGVKLNVK 343
Query: 12 HYGT 1
HYG+
Sbjct: 344 HYGS 347
>gb|EXC75282.1| hypothetical protein L484_000391 [Morus notabilis]
Length = 581
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F +HG+ KALE+F M + GL D+VSYL A+CACNH G+VDEG++LF+SM +
Sbjct: 286 FALHGEASKALEIFGQMREAGLEPDAVSYLGALCACNHAGLVDEGVRLFDSMVGSCLVPN 345
Query: 18 VKHYGT 1
VKH+G+
Sbjct: 346 VKHFGS 351
>ref|XP_004959633.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Setaria italica]
Length = 488
Score = 76.6 bits (187), Expect = 3e-12
Identities = 31/64 (48%), Positives = 49/64 (76%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
+G HG GV+AL+LF LM G++ D V +++ + AC HGG+VD+GL++F++MG++GV+K
Sbjct: 314 YGSHGHGVEALDLFHLMLANGVTPDGVCFVSVLSACAHGGLVDDGLRVFDTMGDHGVEKR 373
Query: 18 VKHY 7
HY
Sbjct: 374 QVHY 377
>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484591|gb|AES65794.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 958
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = -3
Query: 198 FGMHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGEYGVDKT 19
F +G GV+AL LF+ M KEG+ DS++++A + AC+H G+VDEG K+F MGEYG+
Sbjct: 764 FAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLMGEYGIKPV 823
Query: 18 VKHY 7
V+HY
Sbjct: 824 VEHY 827
>ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Solanum lycopersicum]
Length = 602
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -3
Query: 192 MHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGE-YGVDKTV 16
+HG GV+ALELF+ M EGL D V+ L MCAC++ G+VD+G K FESM E YG++ +
Sbjct: 308 VHGLGVEALELFKKMDLEGLVPDDVTMLVIMCACSNVGLVDQGCKFFESMKEDYGIEPKL 367
Query: 15 KHYGT 1
+HYGT
Sbjct: 368 EHYGT 372
>ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Solanum tuberosum]
Length = 602
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -3
Query: 192 MHGDGVKALELFQLMGKEGLSADSVSYLAAMCACNHGGMVDEGLKLFESMGE-YGVDKTV 16
+HG G++ALELF+ M EGL D V+ L MCAC++ G+VD+G K FESM E YG++ +
Sbjct: 308 VHGLGLEALELFKKMDLEGLVPDDVTMLVIMCACSNVGLVDQGCKFFESMKEDYGIEPKL 367
Query: 15 KHYGT 1
+HYGT
Sbjct: 368 EHYGT 372