BLASTX nr result

ID: Catharanthus22_contig00022513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00022513
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006432164.1| hypothetical protein CICLE_v10002244mg [Citr...    67   2e-09
ref|XP_006351753.1| PREDICTED: uncharacterized protein LOC102599...    60   4e-07
ref|XP_004230583.1| PREDICTED: uncharacterized protein LOC101255...    58   1e-06
ref|XP_002307037.2| hypothetical protein POPTR_0005s06600g [Popu...    55   7e-06

>ref|XP_006432164.1| hypothetical protein CICLE_v10002244mg [Citrus clementina]
           gi|567879213|ref|XP_006432165.1| hypothetical protein
           CICLE_v10002244mg [Citrus clementina]
           gi|568821177|ref|XP_006465066.1| PREDICTED:
           uncharacterized protein LOC102630478 isoform X1 [Citrus
           sinensis] gi|557534286|gb|ESR45404.1| hypothetical
           protein CICLE_v10002244mg [Citrus clementina]
           gi|557534287|gb|ESR45405.1| hypothetical protein
           CICLE_v10002244mg [Citrus clementina]
          Length = 253

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -1

Query: 467 SQDSPDKRAVQIPASTKTSNRVVPAYRRAKVRGVLLKDTEDD 342
           SQDSPDK+A Q P ++K +NRV+PA+RRAKVRG LL+DTEDD
Sbjct: 209 SQDSPDKQAAQSPVASKVANRVIPAHRRAKVRGALLQDTEDD 250


>ref|XP_006351753.1| PREDICTED: uncharacterized protein LOC102599500 isoform X1 [Solanum
           tuberosum]
          Length = 251

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = -1

Query: 470 TSQDSPDKRAVQIPASTKTSNRVVPAYRRAKVRGVLLKDTEDDPQD 333
           +S +SP K+A Q+P STK +NRVVPA+RRA+VRGVLL DTE++ QD
Sbjct: 207 SSLESPVKQAAQLP-STKVTNRVVPAHRRARVRGVLLHDTEEERQD 251


>ref|XP_004230583.1| PREDICTED: uncharacterized protein LOC101255339 isoform 1 [Solanum
           lycopersicum] gi|460369468|ref|XP_004230584.1|
           PREDICTED: uncharacterized protein LOC101255339 isoform
           2 [Solanum lycopersicum]
          Length = 250

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/42 (69%), Positives = 36/42 (85%)
 Frame = -1

Query: 458 SPDKRAVQIPASTKTSNRVVPAYRRAKVRGVLLKDTEDDPQD 333
           SP K+A Q+P STK +NRVVPA+RRA+VRGVLL DTE++ QD
Sbjct: 210 SPVKQAAQLP-STKVTNRVVPAHRRARVRGVLLHDTEEERQD 250


>ref|XP_002307037.2| hypothetical protein POPTR_0005s06600g [Populus trichocarpa]
           gi|550338263|gb|EEE94033.2| hypothetical protein
           POPTR_0005s06600g [Populus trichocarpa]
          Length = 297

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -1

Query: 452 DKRAVQIPASTKTSNRVVPAYRRAKVRGVLLKDTEDD 342
           DK A + PASTK +NRVVPA+RRAKVRG LL+D EDD
Sbjct: 258 DKLAGRDPASTKVTNRVVPAFRRAKVRGALLQDIEDD 294


Top