BLASTX nr result

ID: Catharanthus22_contig00022465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00022465
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ23914.1| hypothetical protein PRUPE_ppa009903mg [Prunus pe...    80   4e-13
ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, ...    77   3e-12
ref|XP_002303791.1| chlorophyll a/b-binding protein type II prec...    75   9e-12
ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7...    75   1e-11
gb|ABK95601.1| unknown [Populus trichocarpa]                           75   1e-11
ref|XP_006484100.1| PREDICTED: chlorophyll a-b binding protein, ...    74   2e-11
ref|XP_006352516.1| PREDICTED: chlorophyll a-b binding protein 7...    74   2e-11
ref|XP_006438030.1| hypothetical protein CICLE_v10031886mg [Citr...    74   2e-11
ref|XP_004310079.1| PREDICTED: chlorophyll a-b binding protein, ...    74   2e-11
ref|XP_004310078.1| PREDICTED: chlorophyll a-b binding protein, ...    74   2e-11
ref|XP_002514914.1| chlorophyll A/B binding protein, putative [R...    74   2e-11
ref|XP_002299309.1| chlorophyll a/b-binding protein type II prec...    74   2e-11
gb|ABK95596.1| unknown [Populus trichocarpa]                           74   2e-11
gb|ESW07340.1| hypothetical protein PHAVU_010G121400g, partial [...    74   3e-11
gb|AGV54335.1| chlorophyll A/B binding protein 7 chloroplastic-l...    74   3e-11
gb|AGV54278.1| light-harvesting complex I protein Lhca2 [Phaseol...    74   3e-11
ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7...    74   3e-11
ref|XP_002984998.1| light-harvesting complex [Selaginella moelle...    73   3e-11
sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding pro...    73   5e-11
gb|EPS71951.1| chlorophyll a-b binding protein 7, chloroplastic,...    72   6e-11

>gb|EMJ23914.1| hypothetical protein PRUPE_ppa009903mg [Prunus persica]
          Length = 272

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 40/62 (64%), Positives = 47/62 (75%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+TL ATKASF  G+KLR  + T    S ++F+V AAAA D +RPLWFPGSTPP WLDGS
Sbjct: 25  GSTLAATKASFFGGRKLRVRNLTASSGSSTSFTVRAAAA-DPDRPLWFPGSTPPPWLDGS 83

Query: 7   LP 2
           LP
Sbjct: 84  LP 85


>ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
           vinifera] gi|297738455|emb|CBI27656.3| unnamed protein
           product [Vitis vinifera]
          Length = 271

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/62 (62%), Positives = 45/62 (72%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ +GATKASFL G++L     T   A   +F+VSAAAA D  RPLWFPGSTPP WLDGS
Sbjct: 24  GSVVGATKASFLGGKRLSLKKFTAPAAGTRSFTVSAAAA-DPNRPLWFPGSTPPPWLDGS 82

Query: 7   LP 2
           LP
Sbjct: 83  LP 84


>ref|XP_002303791.1| chlorophyll a/b-binding protein type II precursor [Populus
           trichocarpa] gi|222841223|gb|EEE78770.1| chlorophyll
           a/b-binding protein type II precursor [Populus
           trichocarpa]
          Length = 269

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 37/62 (59%), Positives = 45/62 (72%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ +G+TKASFL G+KLR  + T   A+RS   V+   A D +RPLWFPGSTPP WLDGS
Sbjct: 24  GSLVGSTKASFLRGEKLRLRTYTSPTAARS---VTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 7   LP 2
           LP
Sbjct: 81  LP 82


>ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           isoform 1 [Glycine max]
          Length = 270

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ LG+TKASFL G+KL+  S T    +RS+ +V A A  D  RPLWFPGSTPP WLDGS
Sbjct: 24  GSLLGSTKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPD--RPLWFPGSTPPPWLDGS 81

Query: 7   LP 2
           LP
Sbjct: 82  LP 83


>gb|ABK95601.1| unknown [Populus trichocarpa]
          Length = 269

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/62 (59%), Positives = 45/62 (72%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ +G+TKASFL G+KLR  + T   A+RS   V+   A D +RPLWFPGSTPP WLDGS
Sbjct: 24  GSLVGSTKASFLRGKKLRLRTYTSPTAARS---VTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 7   LP 2
           LP
Sbjct: 81  LP 82


>ref|XP_006484100.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Citrus sinensis]
          Length = 268

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/58 (68%), Positives = 43/58 (74%)
 Frame = -2

Query: 175 GATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGSLP 2
           GATKASFL G+KL+   N     +RS  SVSAAAA D  RPLWFPGSTPP WLDGSLP
Sbjct: 26  GATKASFLGGKKLKLRKNGATAGTRSV-SVSAAAA-DPNRPLWFPGSTPPEWLDGSLP 81


>ref|XP_006352516.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Solanum tuberosum]
          Length = 270

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 45/62 (72%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ +GATKASFL G++LR +  +   A+RS  +V  AA  D  RPLWFPGSTPP WLDGS
Sbjct: 24  GSIVGATKASFLGGRRLRVSKYSTTPAARSATTVCVAAEPD--RPLWFPGSTPPPWLDGS 81

Query: 7   LP 2
           LP
Sbjct: 82  LP 83


>ref|XP_006438030.1| hypothetical protein CICLE_v10031886mg [Citrus clementina]
           gi|557540226|gb|ESR51270.1| hypothetical protein
           CICLE_v10031886mg [Citrus clementina]
          Length = 367

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/58 (68%), Positives = 43/58 (74%)
 Frame = -2

Query: 175 GATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGSLP 2
           GATKASFL G+KL+   N     +RS  SVSAAAA D  RPLWFPGSTPP WLDGSLP
Sbjct: 125 GATKASFLGGKKLKLRKNGATAGTRSV-SVSAAAA-DPNRPLWFPGSTPPEWLDGSLP 180


>ref|XP_004310079.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           isoform 2 [Fragaria vesca subsp. vesca]
          Length = 269

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 41/62 (66%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ L ATKASF  G+KLR  +      S ST     AAA D +RPLWFPGSTPP WLDGS
Sbjct: 22  GSALAATKASFFGGRKLRVRNVAAPSGSSSTSFRVCAAAADPDRPLWFPGSTPPPWLDGS 81

Query: 7   LP 2
           LP
Sbjct: 82  LP 83


>ref|XP_004310078.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           isoform 1 [Fragaria vesca subsp. vesca]
          Length = 286

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 41/62 (66%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ L ATKASF  G+KLR  +      S ST     AAA D +RPLWFPGSTPP WLDGS
Sbjct: 22  GSALAATKASFFGGRKLRVRNVAAPSGSSSTSFRVCAAAADPDRPLWFPGSTPPPWLDGS 81

Query: 7   LP 2
           LP
Sbjct: 82  LP 83


>ref|XP_002514914.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223545965|gb|EEF47468.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 270

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTL-VKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDG 11
           G+T+GATKASFL G++L    +T  V ASRS   V+  A  D +RPLWFPGSTPP WLDG
Sbjct: 24  GSTVGATKASFLSGKRLTVRKHTSPVVASRS---VTVCAVADPDRPLWFPGSTPPPWLDG 80

Query: 10  SLP 2
           SLP
Sbjct: 81  SLP 83


>ref|XP_002299309.1| chlorophyll a/b-binding protein type II precursor [Populus
           trichocarpa] gi|222846567|gb|EEE84114.1| chlorophyll
           a/b-binding protein type II precursor [Populus
           trichocarpa]
          Length = 272

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G  +G+TKASFL G+KLR    T   A+RS   V+   A D +RPLWFPGSTPP WLDGS
Sbjct: 27  GFLVGSTKASFLSGKKLRLKKYTAPTAARS---VTVCVAADPDRPLWFPGSTPPPWLDGS 83

Query: 7   LP 2
           LP
Sbjct: 84  LP 85


>gb|ABK95596.1| unknown [Populus trichocarpa]
          Length = 269

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G  +G+TKASFL G+KLR    T   A+RS   V+   A D +RPLWFPGSTPP WLDGS
Sbjct: 24  GFLVGSTKASFLSGKKLRLKKYTAPTAARS---VTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 7   LP 2
           LP
Sbjct: 81  LP 82


>gb|ESW07340.1| hypothetical protein PHAVU_010G121400g, partial [Phaseolus
           vulgaris]
          Length = 264

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ LG  KASFL G+KL+  S T    +RS+ +V A A  D +RPLWFPGSTPP WLDGS
Sbjct: 23  GSLLGTAKASFLSGRKLKVNSLTAPVGARSSTTVCAVA--DPDRPLWFPGSTPPPWLDGS 80

Query: 7   LP 2
           LP
Sbjct: 81  LP 82


>gb|AGV54335.1| chlorophyll A/B binding protein 7 chloroplastic-like protein
           [Phaseolus vulgaris]
          Length = 269

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ LG  KASFL G+KL+  S T    +RS+ +V A A  D +RPLWFPGSTPP WLDGS
Sbjct: 23  GSLLGTAKASFLSGRKLKVNSFTAPVGARSSTTVCAVA--DPDRPLWFPGSTPPPWLDGS 80

Query: 7   LP 2
           LP
Sbjct: 81  LP 82


>gb|AGV54278.1| light-harvesting complex I protein Lhca2 [Phaseolus vulgaris]
          Length = 269

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ LG  KASFL G+KL+  S T    +RS+ +V A A  D +RPLWFPGSTPP WLDGS
Sbjct: 23  GSLLGTAKASFLSGRKLKVNSFTAPVGARSSTTVCAVA--DPDRPLWFPGSTPPPWLDGS 80

Query: 7   LP 2
           LP
Sbjct: 81  LP 82


>ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           isoform 1 [Glycine max] gi|255645717|gb|ACU23352.1|
           unknown [Glycine max]
          Length = 270

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/62 (59%), Positives = 45/62 (72%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ LG+TKASFL G+KL+  + T    +RS+ +V A A  D  RPLWFPGSTPP WLDGS
Sbjct: 24  GSLLGSTKASFLSGRKLKVNNFTAPVGARSSTTVCAVAEPD--RPLWFPGSTPPPWLDGS 81

Query: 7   LP 2
           LP
Sbjct: 82  LP 83


>ref|XP_002984998.1| light-harvesting complex [Selaginella moellendorffii]
           gi|300147208|gb|EFJ13873.1| light-harvesting complex
           [Selaginella moellendorffii]
          Length = 268

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = -2

Query: 172 ATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGSLP 2
           + K +FL G+ LR  ++ + KA+++ FSV+AAAAT  ERPLWFPGSTPPAWLDGSLP
Sbjct: 28  SAKTTFLAGRPLRNKAH-VAKAAKAVFSVTAAAAT--ERPLWFPGSTPPAWLDGSLP 81


>sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCI type II CAB; Flags: Precursor
           gi|169214|gb|AAA33711.1| chlorophyll binding protein
           precursor [Petunia x hybrida] gi|226259|prf||1503272A
           chlorophyll binding protein
          Length = 270

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 39/62 (62%), Positives = 46/62 (74%)
 Frame = -2

Query: 187 GTTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGS 8
           G+ +GATKASFL G++LR +       SRS  +VSA AA D +RPLWFPGSTPP WLDGS
Sbjct: 24  GSIVGATKASFLGGKRLRVSKFIAPVGSRSV-AVSAVAA-DPDRPLWFPGSTPPEWLDGS 81

Query: 7   LP 2
           LP
Sbjct: 82  LP 83


>gb|EPS71951.1| chlorophyll a-b binding protein 7, chloroplastic, partial [Genlisea
           aurea]
          Length = 259

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = -2

Query: 184 TTLGATKASFLVGQKLRQTSNTLVKASRSTFSVSAAAATDSERPLWFPGSTPPAWLDGSL 5
           +++GATKASF   +KLR    +   +SRS   VS   A D +RPLWFPGSTPPAWLDGSL
Sbjct: 15  SSVGATKASFFGARKLRVGKFSTTSSSRS---VSVCVAADPDRPLWFPGSTPPAWLDGSL 71

Query: 4   P 2
           P
Sbjct: 72  P 72


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