BLASTX nr result
ID: Catharanthus22_contig00022275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00022275 (1335 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA94261.1| retrotransposon protein, putative, unclassified [... 105 3e-68 ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715... 108 2e-57 gb|EMJ17505.1| hypothetical protein PRUPE_ppa019597mg, partial [... 140 5e-57 emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 115 2e-56 emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group] 138 6e-53 gb|AAS98496.1| unknown protein [Oryza sativa Japonica Group] gi|... 134 6e-53 emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] 129 1e-52 gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo... 121 2e-52 ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 123 1e-51 gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 121 1e-51 ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827... 119 2e-51 emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera] 119 4e-51 gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 127 7e-51 gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 121 9e-51 gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 119 1e-50 gb|ABF93966.1| retrotransposon protein, putative, unclassified, ... 119 1e-50 emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 124 3e-49 gb|ABA95339.2| retrotransposon protein, putative, unclassified [... 132 3e-49 emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera] 122 1e-47 gb|ABA97104.1| retrotransposon protein, putative, unclassified [... 121 1e-46 >gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1369 Score = 105 bits (263), Expect(4) = 3e-68 Identities = 51/93 (54%), Positives = 65/93 (69%) Frame = +1 Query: 367 FRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFSK 546 + W + AF+A+KHA+ T PVLA+PD+S PFV+ETDASD+GMG+VLMQ PIA+ SK Sbjct: 803 YLWTSATDQAFQAIKHALVTAPVLAMPDFSIPFVVETDASDKGMGAVLMQNNHPIAFLSK 862 Query: 547 GLGNKQKELSIYEKELMALATAASKWRHYLAGA 645 LG + LS YEKE +A+ A WR YL A Sbjct: 863 ALGPRHLGLSTYEKESLAIMMAVDHWRPYLQHA 895 Score = 103 bits (256), Expect(4) = 3e-68 Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 33/231 (14%) Frame = +3 Query: 705 LSTRWSKESLPQQKWVSKLMGLDYEIQYKRGAENKVVDALSR-----KDDLYMITTVAPL 869 L+T W Q K ++KL+GL Y+I YK+G++N+V DALSR + +L ++ P Sbjct: 914 LTTPW------QHKALTKLLGLRYQIIYKKGSDNRVADALSRYPLGHQVELSALSVALPA 967 Query: 870 WVKQVEESYEGDDMAQQIISDCLLGKGNQHIF------------IGLG*KNKCRNGLLSV 1013 W+++V + Y+ D A I + G F I +G ++ +L+ Sbjct: 968 WIQEVVDGYQQDTDACCKIQTLCINSGAVLDFSLKDGVLYYKNRIWIGNNTSLQHKILAN 1027 Query: 1014 IHVREIRRKRWL-TLDCCN------------LYLFPA---SHRVISPWIGIFEGLPKSGG 1145 +H + + + C L L P + +++S + EGLP+S Sbjct: 1028 LHSSAVGGHSGIQSCTVCQQAKPEHVKYPGMLQLLPVPAHAWQIVS--LDFIEGLPRSAT 1085 Query: 1146 KDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 + IL+VVD+F++Y HF+ L HPFTA VAE +M++I++L+GLP+S++S R Sbjct: 1086 FNCILVVVDKFSKYNHFVPLSHPFTALDVAEAYMQHIHRLHGLPQSLISDR 1136 Score = 78.6 bits (192), Expect(4) = 3e-68 Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 7/87 (8%) Frame = +3 Query: 120 FQLLRQRQLYAEISMCTFAQSRVEYLGHIISDQGVEADPGKGKDIVEWPLPKNITQLRGL 299 FQ+L + QL + S C+FAQ ++ YLGHIIS GV D K + WP+P ++ +LR Sbjct: 713 FQILHKHQLKVKKSKCSFAQQKLAYLGHIISPNGVSTDSDKIAVVQSWPVPSSVKELRSF 772 Query: 300 -------RKFVKGYGVLSKPLCRMLQQ 359 RKFV+ YG+LSKPL +L++ Sbjct: 773 LGLAGYYRKFVRNYGILSKPLTNLLKK 799 Score = 42.0 bits (97), Expect(4) = 3e-68 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +1 Query: 25 TELMRKFVLVFFDDILIYSPGLQ*HLEHLKKVF 123 + L+RK VLVF DDILIYS L+ HL HL+ VF Sbjct: 681 SSLLRKCVLVFVDDILIYSRTLEEHLVHLQTVF 713 >ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715003 [Oryza brachyantha] Length = 1415 Score = 108 bits (271), Expect(3) = 2e-57 Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 7/216 (3%) Frame = +3 Query: 672 HILSLKLITSALSTRWSKESLPQQKWVSKLMGLDYEIQYKRGAENKVVDALSRK-DDLYM 848 H + L L T W Q K +KL+GLDY+I Y++G+ N DALSR+ +++ Sbjct: 905 HHSLMHLSDQRLHTVW------QHKAFTKLLGLDYKICYRKGSSNAAADALSRQFQEVHA 958 Query: 849 ITTVAPLWVKQVEESYEGDDMAQQII------SDCLLGKGNQHIFIGLG*KNKCRNGLLS 1010 I+T PLW+++V + YE D + +++ S K ++ ++ GLL Sbjct: 959 ISTCTPLWLQEVVKGYENDSESLKLLTALFQPSSQTWAKPDRAKYL----------GLLQ 1008 Query: 1011 VIHVREIRRKRWLTLDCCNLYLFPASHRVISPWIGIFEGLPKSGGKDTILLVVDQFTRYG 1190 + V E + +VIS + EGLP+S + I+++VD+F++YG Sbjct: 1009 PLPVPE------------------GAWQVIS--MDFIEGLPRSHRFNCIMVIVDKFSKYG 1048 Query: 1191 HFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 HF+ L HPF A VA++FM ++YKL+GLP +I+S R Sbjct: 1049 HFIPLAHPFNALDVAKVFMSHVYKLHGLPTTIISDR 1084 Score = 97.4 bits (241), Expect(3) = 2e-57 Identities = 50/106 (47%), Positives = 62/106 (58%) Frame = +1 Query: 367 FRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFSK 546 F+W E+ +AF LK A+ + PVLALPD+ K FV+ETDA D G+G+VL Q+ PIAY SK Sbjct: 805 FKWSAEADSAFNTLKQALVSAPVLALPDFKKTFVVETDACDTGIGAVLSQDNHPIAYVSK 864 Query: 547 GLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 L K LS YEKE M A WR YL +L + H Sbjct: 865 ALSPKYIGLSTYEKECMVALLAVDHWRSYLQLGSFTILTDHHSLMH 910 Score = 66.2 bits (160), Expect(3) = 2e-57 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 7/87 (8%) Frame = +3 Query: 120 FQLLRQRQLYAEISMCTFAQSRVEYLGHIISDQGVEADPGKGKDIVEWPLPKNITQLRGL 299 FQLLRQ Q ++ YLGH+I GV +P K +D++ W +P NI +L G Sbjct: 728 FQLLRQGQ-------------QLSYLGHVIGVNGVSTEPNKIQDVLNWQVPHNIKKLGGF 774 Query: 300 -------RKFVKGYGVLSKPLCRMLQQ 359 RKFVK YG+LSKPL ++L++ Sbjct: 775 LGLTGYYRKFVKNYGILSKPLTQLLKK 801 >gb|EMJ17505.1| hypothetical protein PRUPE_ppa019597mg, partial [Prunus persica] Length = 1392 Score = 140 bits (352), Expect(2) = 5e-57 Identities = 94/233 (40%), Positives = 126/233 (54%), Gaps = 16/233 (6%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWSI*AISSV 213 +RKFVLVFFDDIL+YS L H+ HL VF +LR V L +KA A S+V Sbjct: 658 LRKFVLVFFDDILVYSRTLNEHVHHLTTVFE-------VLR-VAQLKMKASKCTFAQSTV 709 Query: 214 TREWKQIQGKG------KI*WSGPCPRISLN*GDLENLSRVMGY*AS---HY-------V 345 I G KI PR G L + GY H+ Sbjct: 710 DYLGHTISEAGVSVDKKKIQCIDNWPRPETVKG-LRGFLGLAGYYRKFVHHFGTISKPLT 768 Query: 346 ECCNKDRFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQR 525 + KD F W + +AF+ALK A++TTPVL LPD+SK FV+E+DAS+ G+G++L QEQR Sbjct: 769 DLLRKDNFHWSPAADSAFQALKTALTTTPVLRLPDFSKQFVVESDASNNGVGAILSQEQR 828 Query: 526 PIAYFSKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 PIAY SK L + + LS+Y+KE++A+ A +WR YL G +++ T H Sbjct: 829 PIAYLSKSLSERHRSLSVYDKEMLAVVLAVQQWRPYLLGRQFKIVTDHQTIKH 881 Score = 109 bits (273), Expect(2) = 5e-57 Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 57/244 (23%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDLYMITTVA-PLW--VKQVEESYEGDD 908 Q+KW+ KL+G +YEI+Y+ G++N DALSRK +L I ++ P++ + Q++++Y D Sbjct: 892 QEKWLLKLLGYNYEIEYRAGSKNAGPDALSRKSELLAIMGLSTPIFYCIPQIQQAYTSDS 951 Query: 909 MAQQIIS----------------DCLLGKGNQHIFIGLG*KNKCRNGLLSVIHV------ 1022 AQQ+IS +CL K + +F+ + ++ R +L H Sbjct: 952 EAQQLISLLQADPTAKPHYSWQNNCLYYK--ERVFVPVS--SQWRTMILEEFHSTPMGGH 1007 Query: 1023 --------REIRRKRWLTL-----------DCCNLYLFPASHR--VISP-------WIGI 1118 R +R RW L D C + A H ++ P W I Sbjct: 1008 SGQLRTYKRILRNFRWPRLKKDVQAFVAACDTCQRQNYEALHPPGLLQPLPIPDSIWQDI 1067 Query: 1119 ----FEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESI 1286 EGLP GK+ IL+VVD+ ++YGHF+ + HP+TAS+VA+ F+ ++KL+G+P +I Sbjct: 1068 AMDFVEGLPSVNGKNAILVVVDRLSKYGHFIPIKHPYTASQVADFFICEVFKLHGMPRTI 1127 Query: 1287 VSVR 1298 VS R Sbjct: 1128 VSDR 1131 >emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] Length = 1373 Score = 115 bits (288), Expect(4) = 2e-56 Identities = 56/95 (58%), Positives = 66/95 (69%) Frame = +1 Query: 358 KDRFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAY 537 KD F W E AF+ LK M+T PVLALPD+SKPFVLETDA +G+VL+QE RPIAY Sbjct: 855 KDNFHWGPEQQKAFDQLKKIMTTCPVLALPDFSKPFVLETDACGSSIGAVLIQEGRPIAY 914 Query: 538 FSKGLGNKQKELSIYEKELMALATAASKWRHYLAG 642 +SK LG + S YEKE +A+ A KWRHYL G Sbjct: 915 YSKALGQRAAGSSTYEKEAIAILEALKKWRHYLLG 949 Score = 88.6 bits (218), Expect(4) = 2e-56 Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 11/109 (10%) Frame = +3 Query: 66 YTNLQPRTAIALGAFEKGFQ----LLRQRQLYAEISMCTFAQSRVEYLGHIISDQGVEAD 233 ++ L R+ L EK Q +LR +LYA+ S CTFA VEYLGHI+S +GV Sbjct: 747 FSKLDLRSGKNLEEHEKQLQCVLSILRSHKLYAKRSKCTFAAPSVEYLGHIVSGEGVATK 806 Query: 234 PGKGKDIVEWPLPKNITQLRGL-------RKFVKGYGVLSKPLCRMLQQ 359 P K KD++EW +P NIT+LRG R+FV+GYG + +PL +L++ Sbjct: 807 PSKIKDVLEWAVPVNITKLRGFLRLTGYYRRFVQGYGAICRPLHDLLKK 855 Score = 59.3 bits (142), Expect(4) = 2e-56 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 8/88 (9%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKD--------DLYMITTVAPLWVKQVEES 893 Q K + KL+ LDY I+YK+G EN DALSR+D Y IT V P W++ V+ S Sbjct: 974 QHKLLLKLLELDYNIEYKKGKENAAADALSRRDTKEVEEKEKCYAITLVYPEWIEDVKSS 1033 Query: 894 YEGDDMAQQIISDCLLGKGNQHIFIGLG 977 Y D +++ L + + + +G G Sbjct: 1034 YLNDAQYMKLVDGEELNEESSNFSLGAG 1061 Score = 25.8 bits (55), Expect(4) = 2e-56 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 650 WRYYLEGAHFIIKTDH*RLKY 712 WR+YL G II+ D LKY Sbjct: 943 WRHYLLGNQVIIRIDQQSLKY 963 Score = 59.3 bits (142), Expect = 4e-06 Identities = 24/51 (47%), Positives = 37/51 (72%) Frame = +2 Query: 962 FYWPRMKEQMQEWIAQCDTCQRNKEEKVAYPRLLQPLPIPSKSQSHISMDW 1114 FYWP++K+++++ +++C TCQ K E V P LL PL IP + +HISMD+ Sbjct: 1107 FYWPQLKKEVEKIVSECPTCQITKAEHVHSPGLLDPLQIPEMAWTHISMDF 1157 >emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group] Length = 1409 Score = 138 bits (347), Expect(2) = 6e-53 Identities = 88/228 (38%), Positives = 121/228 (53%), Gaps = 10/228 (4%) Frame = +1 Query: 31 LMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWS----I* 198 ++RKFVLVFFDDILIYSP + HL+HLK V + + ++L + S I Sbjct: 692 VLRKFVLVFFDDILIYSPDKESHLQHLKIVLQLLADNKWQVKLSKCSFAQQELSYLGHII 751 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 + V+ + +IQ + W P L G + G + K Sbjct: 752 GVLGVSTDPSKIQDV--LNWPQPTTLKKLRGFLGLAGYYRRFVKNFGVISKPLTMLLRKG 809 Query: 364 -RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYF 540 F+W E+ +AF+ LKHA+ PVLALPD+SKPF +ETDASDQG+G+VL Q++ PIA+ Sbjct: 810 VPFKWTAETKSAFQQLKHALVAAPVLALPDFSKPFTIETDASDQGIGAVLSQDKHPIAFL 869 Query: 541 SKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 SK LG K K LS YEKE +A+ A WR Y+ +L + H Sbjct: 870 SKALGPKTKGLSTYEKEYLAILLAMENWRPYIQQGEFVILTNHHSLMH 917 Score = 98.2 bits (243), Expect(2) = 6e-53 Identities = 68/192 (35%), Positives = 90/192 (46%), Gaps = 5/192 (2%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKD-----DLYMITTVAPLWVKQVEESYEG 902 QQK +KL+GL Y I Y++G N DALSRK+ +L I+ PLW K Y G Sbjct: 928 QQKAFTKLLGLQYRICYRKGLSNAAADALSRKELPDSAELAAISECIPLWAKPDRSKYPG 987 Query: 903 DDMAQQIISDCLLGKGNQHIFIGLG*KNKCRNGLLSVIHVREIRRKRWLTLDCCNLYLFP 1082 LL + V E W TL Sbjct: 988 ---------------------------------LLQPLPVPE---GAWQTLS-------- 1003 Query: 1083 ASHRVISPWIGIFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYK 1262 + EGLP+SG + IL+VVD+F++Y HF+ L HPFTA+ VA FM++IYK Sbjct: 1004 ---------LDFIEGLPRSGHYNCILVVVDKFSKYSHFIPLTHPFTANGVATEFMKHIYK 1054 Query: 1263 LNGLPESIVSVR 1298 L+GLP+ I+S R Sbjct: 1055 LHGLPKVIISDR 1066 >gb|AAS98496.1| unknown protein [Oryza sativa Japonica Group] gi|50300521|gb|AAT73663.1| hypothetical protein [Oryza sativa Japonica Group] Length = 915 Score = 134 bits (336), Expect(2) = 6e-53 Identities = 88/224 (39%), Positives = 117/224 (52%), Gaps = 12/224 (5%) Frame = +1 Query: 16 HEYTELMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLV-CVL-LLKAGW 189 H +RKFVLVFFDDILIYS + HLEHLK V + + ++RL C L + + Sbjct: 320 HVLRPFLRKFVLVFFDDILIYSQNQEEHLEHLKLVMQVLEENNLVIRLKKCAFGLSEVAY 379 Query: 190 SI*AISSV-----TREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASH 339 + IS R+ +I G WS P L G + G Sbjct: 380 LVHIISKKGVATDPRKVDKITG-----WSIPTDVTELRKFLGMTGYYRRFIKGYGLICRP 434 Query: 340 YVECCNKDRFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQE 519 + K +W E AAF LK+ M ++PVLA+PD++K FV+E DA G+G+VLMQ Sbjct: 435 MHDMLKKQGLQWGPEQTAAFNELKNKMVSSPVLAMPDFNKEFVIEADACGTGIGAVLMQS 494 Query: 520 QRPIAYFSKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHL 651 RPI++FSK LG K S+YEKE +A+ A KWRHY+ G L Sbjct: 495 GRPISFFSKALGPKAAGQSVYEKEAIAIMEAIKKWRHYILGGKL 538 Score = 102 bits (254), Expect(2) = 6e-53 Identities = 78/213 (36%), Positives = 107/213 (50%), Gaps = 26/213 (12%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSR--------KDDLYMITTVAPLWVKQVEES 893 Q K + KLM DY I+YK G EN VVDALSR ++ IT V P WV+ + S Sbjct: 560 QHKLMLKLMEYDYSIEYKPGWENSVVDALSRMPRQQEGVEESSQAITVVVPDWVEDIRRS 619 Query: 894 YEGDDMAQQIISDCLLGKGNQHIFIGLG*KNKCRNGLLSV---IHVREIRRKRWLTLDC- 1061 Y+ D A +I+S L+G + K +GLL I V R +C Sbjct: 620 YDEDLQAHKILS--LVGSEADP-----NGEYKLESGLLKYKGRIFVGLKREVDKFVRECP 672 Query: 1062 -CNLYLFPASH--RVISP-------WIGI----FEGLPKSGGKDTILLVVDQFTRYGHFL 1199 C + H ++ P W I LP S GKD L+VVD+ T+Y HFL Sbjct: 673 TCQVTKGENVHIPGLLEPLEIPDMAWSHITMDFIVDLPLSRGKDVTLVVVDRLTKYAHFL 732 Query: 1200 SLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 +L HP+T V E+FM+NI+KL+G+P +I++ R Sbjct: 733 ALSHPYTVQMVVEIFMDNIHKLHGMPTAIITDR 765 >emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] Length = 1366 Score = 129 bits (325), Expect(2) = 1e-52 Identities = 80/215 (37%), Positives = 114/215 (53%), Gaps = 7/215 (3%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRL--VCVLLLKAGWSI*AIS 207 +RKF+LVFFDDIL+YS L H+ HL+ V + C + + IS Sbjct: 676 LRKFILVFFDDILVYSKNLADHVYHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLIS 735 Query: 208 SVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKDRFR 372 + + + + W P SL G + G A+ K+ F+ Sbjct: 736 KDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTXLLKKNSFK 795 Query: 373 WCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFSKGL 552 W E + AF+ LKHA+++ PVLALPD+S PF ++ DAS G+G+VLMQ+ RP+AY S+ + Sbjct: 796 WTESAKRAFQDLKHAVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAI 855 Query: 553 GNKQKELSIYEKELMALATAASKWRHYLAGAHLEV 657 K +LS YEKELMAL A KWR YL G + ++ Sbjct: 856 HGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKI 890 Score = 105 bits (262), Expect(2) = 1e-52 Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 47/234 (20%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDD------LYMITTVAPLWVKQVEESYE 899 QQ+W++KL+G ++ ++YK+G ENKV DALSRK + LY IT A W++Q+ SY Sbjct: 910 QQQWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTSYA 969 Query: 900 GDDMAQQIISD----------------CLLGKGNQHIFIGLG*KNKCRNGLLSVIH---- 1019 D QQII + L KG +I + R +L ++H Sbjct: 970 IDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPA----SKELREQILYLLHSSPQ 1025 Query: 1020 ---------------------VREIRRKRWLTLDCCNLYLFPASHRVISPWIGIFEGLPK 1136 +R+ R+ D C H G+ + LP Sbjct: 1026 GGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPA-----GLLQPLP- 1079 Query: 1137 SGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 K I++VVD+ ++Y HF+ + HP+TASK+A++F+ NI+KL+GLP SIV+ R Sbjct: 1080 IPTKSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDR 1133 >gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group] gi|31433481|gb|AAP54986.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1409 Score = 121 bits (303), Expect(2) = 2e-52 Identities = 83/220 (37%), Positives = 115/220 (52%), Gaps = 14/220 (6%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLR-LVCVLLLKAGWSI*AI-- 204 +RKFVLVFFDDILIYS H +H+K V ++R C L + + I Sbjct: 773 LRKFVLVFFDDILIYSKNRAEHKQHIKFVLEVLRAHELVIRPKKCAFGLSSVSYLGHIIF 832 Query: 205 -SSVTREWKQIQGKGKI*WSGPCPRISLN*GDLENLSRVMGY*ASH---YVECCN----- 357 + V + +++ W P P+ N DL + GY Y C Sbjct: 833 QNGVATDPSKVEKIAN--W--PIPK---NVTDLRKFLGITGYYRRFIKGYGLICRPLHDM 885 Query: 358 --KDRFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPI 531 K+ F+W E+ AF+ LK M ++PVL LPD++K F +E DA G+G+VLMQ +PI Sbjct: 886 LKKEGFQWGEKQTEAFQELKQKMCSSPVLTLPDFTKEFTIEADACGTGIGAVLMQSGKPI 945 Query: 532 AYFSKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHL 651 A+FSK LG K SIY+KE MA+ + KWRHY+ G+ L Sbjct: 946 AFFSKSLGPKAAAQSIYKKEAMAILESLKKWRHYILGSKL 985 Score = 113 bits (282), Expect(2) = 2e-52 Identities = 81/222 (36%), Positives = 115/222 (51%), Gaps = 35/222 (15%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSR-------KDDLYMITTVAPLWVKQVEESY 896 Q K + KLM DY I+YK G EN V DALSR ++ IT V P W+ ++ SY Sbjct: 1007 QHKLLLKLMEYDYCIEYKAGKENVVADALSRLPQGKSEEEQCDAITVVIPDWILDIQRSY 1066 Query: 897 EGDDMAQQIISDCLLGKGN---QHIFIGLG*KNKCRNGLLSVIHVREIRRK-RWLTL--- 1055 EGD A +I+S ++G + Q G+ R L I+ WL L Sbjct: 1067 EGDIQAHKILS--IIGTDSDPDQQYSFGIWNPKIQRKDLCMRATYHRIKSLFYWLGLKKV 1124 Query: 1056 ------DCCNLYLFPASH----RVISP-------WIGI----FEGLPKSGGKDTILLVVD 1172 +C + A H +++P W I EGLPKS GKD IL+VVD Sbjct: 1125 VEQFIRECPVCQVTKAEHVHIPGLLNPLEVPDMAWTHITMDFIEGLPKSKGKDVILVVVD 1184 Query: 1173 QFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 + T+Y HFL+L HP++ +V E+FM+NI+KL+G+P +I++ R Sbjct: 1185 RLTKYAHFLALTHPYSVEQVVEVFMDNIHKLHGMPMAIITDR 1226 >ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group] Length = 866 Score = 123 bits (309), Expect(2) = 1e-51 Identities = 80/216 (37%), Positives = 108/216 (50%), Gaps = 10/216 (4%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLR-LVCVL----LLKAGWSI* 198 +RKFVLVFFDDILIYS H +HL V + + CV + G+ I Sbjct: 113 LRKFVLVFFDDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYII- 171 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 + S V + ++Q W P L G + G + K+ Sbjct: 172 SSSGVATDPVKVQAVQN--WPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKN 229 Query: 364 RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFS 543 F W E AF+A+K ++ PVLA+PD+S PF+LE DAS G+G+VLMQ RP+AY S Sbjct: 230 NFHWQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLS 289 Query: 544 KGLGNKQKELSIYEKELMALATAASKWRHYLAGAHL 651 K +G K LS Y+KE +A+ A KW+HY G L Sbjct: 290 KAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSL 325 Score = 108 bits (270), Expect(2) = 1e-51 Identities = 77/241 (31%), Positives = 108/241 (44%), Gaps = 54/241 (22%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDLYMITT--VAPLWVKQVEESYEGDDM 911 Q K + KL+ DY+I+YK+G ENK DALSR L +TT + P W+ +V SY D Sbjct: 347 QHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALTTTVIVPQWITEVAASYSTDPK 406 Query: 912 AQQIISDCLLG---------KGN-----QHIFIGLG*KNKCRNGLLSVIHVREI---RRK 1040 ++ S + KG HI +G G N R LL H + + Sbjct: 407 CHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAG--NTLREQLLVSFHDSALGGHSGE 464 Query: 1041 RWLTLDCCNLYLFPASHRVISPWI-----------------------------------G 1115 R L+ +P ++ ++ Sbjct: 465 RATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMD 524 Query: 1116 IFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSV 1295 EGLPKS GKD I ++VD+FT+Y HF+ L HPFTA ++ F+E+ YKL+GLP IVS Sbjct: 525 FVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSD 584 Query: 1296 R 1298 R Sbjct: 585 R 585 >gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 1548 Score = 121 bits (304), Expect(3) = 1e-51 Identities = 82/216 (37%), Positives = 109/216 (50%), Gaps = 11/216 (5%) Frame = +1 Query: 22 YTELMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRL-----VCVLLLKAG 186 + +RKFVLVF DDIL+YS HL+HL+ V +L L G Sbjct: 763 FAPYLRKFVLVFMDDILVYSKSWTDHLKHLRCVLQLLQQHQLCAKLSKCSFAAPQLEYLG 822 Query: 187 WSI*AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVEC 351 I A T K K + W P L G + G A Sbjct: 823 HIISAAGVATDAEKT---KVMLQWPVPTNLTELRGFLGLTGYYRKFVKNYGILAKPLTVL 879 Query: 352 CNKD-RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRP 528 K+ +F W E + AF++LK AMS+TPVL LP+++KPF +ETDA G+G+VL QE P Sbjct: 880 LKKNVKFVWTEHTQKAFDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHP 939 Query: 529 IAYFSKGLGNKQKELSIYEKELMALATAASKWRHYL 636 +A++SK LG ++LSIYEKE +A+ A KWR YL Sbjct: 940 VAFYSKALGINNQKLSIYEKEFLAIMMAIDKWRPYL 975 Score = 106 bits (265), Expect(3) = 1e-51 Identities = 80/240 (33%), Positives = 113/240 (47%), Gaps = 53/240 (22%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDLYMITTVA---PLWVKQVEESYEGDD 908 Q+K ++KL+GL Y+ QYKRGAENK DALSR + + ++ P+WV++V SY D+ Sbjct: 1002 QRKAMTKLIGLQYKFQYKRGAENKSADALSRVGHFFSLQAISIAQPVWVQEVVNSYVVDN 1061 Query: 909 MAQQIISDCLLGKGNQHIF------------IGLG*KNKCRNGLLSVIHVREI------- 1031 AQ ++++ + N F I LG + ++S H I Sbjct: 1062 QAQSLLTELAIMSPNASGFSLVHGLIKKKGRIWLGANSALHTKIISSFHDSAIGGHSGVM 1121 Query: 1032 ----RRKR---WLTLD--------------------CCNLYLFPASHRVISPWIGI---- 1118 R K+ W L C + L W I Sbjct: 1122 ATYHRVKKLFVWKGLKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTGAWQDISMDF 1181 Query: 1119 FEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 EGLP S G D IL+VVD+FT+Y HFL L HPFTA +VA+ ++ + L G+P+SIVS R Sbjct: 1182 IEGLPLSKGSDVILVVVDRFTKYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKSIVSDR 1241 Score = 24.3 bits (51), Expect(3) = 1e-51 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 650 WRYYLEGAHFIIKTDH 697 WR YL F+I+TDH Sbjct: 971 WRPYLLRGPFVIRTDH 986 >ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium distachyon] Length = 1665 Score = 119 bits (299), Expect(2) = 2e-51 Identities = 81/223 (36%), Positives = 117/223 (52%), Gaps = 36/223 (16%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDL---YMITTVAPLWVKQVEESYEGDD 908 QQ+ +LMGL Y+I YK+G NK DALSR+ +L Y ++ V P WV+ + E Y+ D Sbjct: 1144 QQRAFFRLMGLQYKIVYKKGNTNKAADALSRRPNLLHNYAMSAVQPRWVEIIIEGYQHDP 1203 Query: 909 MAQQIISDCLLGKGNQ------------HIFIGLG*KNKCRNGLLSVIHVREIRRK---R 1043 A+Q++++ + N H I LG +L +H + + Sbjct: 1204 QAKQLLAELAIHSPNSQGYSLTDGIIRFHGRIWLGVHKAAHQAVLLALHSSGVGGHSDVQ 1263 Query: 1044 WLTLDC--CN------------LYLFP----ASHRVISPWIGIFEGLPKSGGKDTILLVV 1169 C C L FP A H V +I EGLP S DTIL+V+ Sbjct: 1264 TFVQHCRVCQQAKGDHNRTPGLLQPFPVPPEAWHTVSMDFI---EGLPSSNHFDTILVVI 1320 Query: 1170 DQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 D+FT+YGHF+ L HPFTA+ VA+LF++N+Y+L+GLP+ I+S R Sbjct: 1321 DKFTKYGHFIPLKHPFTAATVAQLFLDNVYRLHGLPKIIISDR 1363 Score = 111 bits (278), Expect(2) = 2e-51 Identities = 79/215 (36%), Positives = 111/215 (51%), Gaps = 10/215 (4%) Frame = +1 Query: 22 YTELMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*-DNASFMLRLVCVLL---LKAGW 189 + ++RKFVLVF DDILIYS ++ H+ HL++VF+ N F+ C L+ Sbjct: 905 FAHVIRKFVLVFVDDILIYSRTMEDHVNHLEQVFTLLFQNQLFVKLNKCSFAQPSLEYLG 964 Query: 190 SI*AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECC 354 I + V+ + +I+ + W P L G R G Sbjct: 965 HIIGANGVSTDPAKIEAVQQ--WPTPLNVKQLRGFLGLAGYYRRFIRNFGIICRPLTTLL 1022 Query: 355 NKD-RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPI 531 K+ F W AF ALK A+ PVLALPD++K FVLETDA G+G+VLMQ+ P+ Sbjct: 1023 KKNVPFIWTSIEDDAFSALKQALVQAPVLALPDFAKEFVLETDACAYGVGAVLMQQGHPL 1082 Query: 532 AYFSKGLGNKQKELSIYEKELMALATAASKWRHYL 636 A+ S+ LG K + LS Y+KE +A+ A KW+ YL Sbjct: 1083 AFLSRALGPKNQSLSTYDKECLAILLAIEKWKSYL 1117 >emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera] Length = 1308 Score = 119 bits (297), Expect(2) = 4e-51 Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 10/213 (4%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWSI*AISSV 213 +RKF+LVFFD+ILIYSP + HLEH++ + F ++ K Sbjct: 569 LRKFILVFFDBILIYSPTWEQHLEHVQXTLAVLRQHQFYVKXSKXAFGKQELEYLGHIIT 628 Query: 214 TREWKQIQGKGKI*WSGPCPRISLN*GDLENLSRVMGY*----------ASHYVECCNKD 363 R K + K + + P P N +L + GY A K+ Sbjct: 629 HRGVKVDEKKIEAMVAXPRPS---NITELRGFLGLTGYYRKFVQGYGLIARPLTNLLKKE 685 Query: 364 RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFS 543 +F+W +++ AAF ALK AM++T LA+P++++PF +ETDAS G+G+VL Q+ PIAY S Sbjct: 686 KFQWNDKAEAAFLALKQAMTSTXTLAMPNFTEPFTIETDASGNGIGAVLTQQNXPIAYMS 745 Query: 544 KGLGNKQKELSIYEKELMALATAASKWRHYLAG 642 LG ++ SIY KE++A+ A WR YL G Sbjct: 746 XALGITKQTWSIYAKEMLAIVEAIRLWRPYLLG 778 Score = 111 bits (277), Expect(2) = 4e-51 Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 34/224 (15%) Frame = +3 Query: 729 SLPQQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDLYMITTV----APLWVKQVEESY 896 +L QQKWV+KL+G DYEI ++ G EN DALSR+ + ++ T+ +W KQ+ E++ Sbjct: 800 TLEQQKWVAKLLGYDYEIIFRTGRENSAADALSRRQESPLLATLHFSEVDIW-KQIREAF 858 Query: 897 EGDDMAQQIISDCLLGK-------GNQHIFIGL---------G*KNKCRNGLLSVIHVRE 1028 + D Q LLGK GN GL + R LL +H + Sbjct: 859 KSDSYVQ------LLGKKAGDPPHGNLTWHDGLLLYKGKVVVPADHSLRAKLLYEVHDSK 912 Query: 1029 IRRKRWLTLDCCNL---YLFPASHRVISPWI-----------GIFEGLPKSGGKDTILLV 1166 + + L + +P H+ + ++ EGLP S GKDTIL+V Sbjct: 913 VGGHSGILRTYRRLQQQFYWPKMHKAVQXFVQKCEVWEDITLDFIEGLPTSHGKDTILVV 972 Query: 1167 VDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 VD+ +++ HF+ L HPFTA V E F+E + KL+G+P I+S R Sbjct: 973 VDRLSKFAHFIPLTHPFTAKVVVENFIEGVVKLHGMPRFIISDR 1016 >gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group] Length = 1608 Score = 127 bits (319), Expect(2) = 7e-51 Identities = 85/228 (37%), Positives = 116/228 (50%), Gaps = 10/228 (4%) Frame = +1 Query: 31 LMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWS----I* 198 ++RKF LVFFDDILIYSP L+ HL+H++ V + ++L + S + Sbjct: 783 VLRKFALVFFDDILIYSPTLELHLQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYLGHVI 842 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 + V + +IQ + W P L G R G + + K Sbjct: 843 GAAGVATDPAKIQDV--VSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKG 900 Query: 364 -RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYF 540 F+W E +AF+ LK A+ PVLALPD+SK F +ETDASD G+G+VL QE+ PIAY Sbjct: 901 IPFKWTPEIESAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYL 960 Query: 541 SKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 S+ LG K + LS YEKE MA+ A WR YL +L + H Sbjct: 961 SRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEFIILTDHHSLMH 1008 Score = 102 bits (253), Expect(2) = 7e-51 Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 54/263 (20%) Frame = +3 Query: 672 HILSLKLITSALSTRWSKESLPQQKWVSKLMGLDYEIQYKRGAENKVVDALSRKD----D 839 H + L L T W QQK +KL+GL Y+I Y++G N DALSR++ + Sbjct: 1003 HHSLMHLTEQRLHTPW------QQKAFTKLLGLQYKICYRKGVSNAAADALSRRESPISE 1056 Query: 840 LYMITTVAPLWVKQVEESYEGDDMAQQIISDCLLGKGNQHIF------------IGLG*K 983 + I+ P W++++ + Y+ D ++Q++++ + ++ + I +G Sbjct: 1057 VAAISECIPSWMQELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQGILKYKGKIWVGNN 1116 Query: 984 NKCRNGLLSVIHVREI----------RRKRWL------------TLDCCNLYLFPASHRV 1097 ++ L++ +H + R+ + L L C + L R Sbjct: 1117 TALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRA 1176 Query: 1098 ISP------------W----IGIFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASK 1229 P W + EGLP+S + IL+VVD+F++Y HF+ L HPF A Sbjct: 1177 RYPGLLQPLPVPAGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGG 1236 Query: 1230 VAELFMENIYKLNGLPESIVSVR 1298 VA+ FM+NIYKL+GLP +I+S R Sbjct: 1237 VAQEFMKNIYKLHGLPRAIISDR 1259 >gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 937 Score = 121 bits (304), Expect(3) = 9e-51 Identities = 87/211 (41%), Positives = 106/211 (50%), Gaps = 10/211 (4%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLR-----LVCVLLLKAGWSI* 198 +RKFVLVF DDIL+YSP L HL HL++VF R C L G I Sbjct: 160 IRKFVLVFMDDILVYSPDLDSHLHHLQQVFVILRQHQLFARRSKCSFACTQLEYLGHIIS 219 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*G-DLENLSR--VMGY*--ASHYVECCNKD 363 T K + W P L L R V GY A K Sbjct: 220 DKGVSTDPEKTA---AMLAWPVPTSVTELRGFLGLTGYYRKFVQGYSIIARPLTLLLKKK 276 Query: 364 RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFS 543 F W + + AF+ LK AMS TP+LALP++ PF LETDA G+G+VL Q+ PIAY+S Sbjct: 277 AFLWTDAAQLAFDQLKTAMSNTPMLALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYS 336 Query: 544 KGLGNKQKELSIYEKELMALATAASKWRHYL 636 K LG ++LSIYEKE +A+ A KWR YL Sbjct: 337 KTLGPVNQKLSIYEKEFLAIMMAVDKWRCYL 367 Score = 103 bits (257), Expect(3) = 9e-51 Identities = 80/240 (33%), Positives = 114/240 (47%), Gaps = 53/240 (22%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSR---KDDLYMITTVAPLWVKQVEESYEGDD 908 QQK ++KLMGL Y QYKRG N V DALSR + V P+W++++ SY D Sbjct: 394 QQKAMTKLMGLQYSFQYKRGVNNIVADALSRMPSSSQFCAFSVVQPIWIQEMINSYTVDP 453 Query: 909 MAQQIISDCLLGKGNQHIF------------IGLG*KNKCRNGLLSVIHVREI------- 1031 AQQ++++ + N + I +G L+ H + Sbjct: 454 QAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIA 513 Query: 1032 ----RRKR---W--LTLDCCNLY-----LFPASHR------VISP-------WIGI---- 1118 R K+ W L LD N A H +++P W I Sbjct: 514 ATYHRIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDF 573 Query: 1119 FEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVSVR 1298 EGLP+S G + IL+VVD+FT+Y +F+ L HPFTAS+VA L + ++K +G+P SIVS R Sbjct: 574 IEGLPRSDGYNAILVVVDRFTKYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDR 633 Score = 24.6 bits (52), Expect(3) = 9e-51 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +2 Query: 650 WRYYLEGAHFIIKTDH 697 WR YL+ FIIKT H Sbjct: 363 WRCYLQRGPFIIKTYH 378 >gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group] Length = 1923 Score = 119 bits (297), Expect(2) = 1e-50 Identities = 82/228 (35%), Positives = 113/228 (49%), Gaps = 10/228 (4%) Frame = +1 Query: 31 LMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWS----I* 198 ++RKF LVFFDDILIYSP L H++HL++V + ++L + + I Sbjct: 219 VLRKFTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGHII 278 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 VT + +I + W P L G R G + K Sbjct: 279 GKDGVTTDPSKIADV--LHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKG 336 Query: 364 -RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYF 540 F+W + AF ALK A+ + PVLALPD+SK F +ETDA D G+G+VL Q++ PIA+ Sbjct: 337 VPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFV 396 Query: 541 SKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 SK LG K + LS YEKE +A+ A +WR YL +L H Sbjct: 397 SKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMH 444 Score = 109 bits (273), Expect(2) = 1e-50 Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 55/242 (22%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDD-----LYMITTVAPLWVKQVEESYEG 902 Q K +KLMGL Y++ Y+RG N DALSR+D+ L+ ++ PLW+ V + YE Sbjct: 455 QHKAFTKLMGLQYKVCYRRGTSNAAADALSRRDEETNDQLWAVSECQPLWLTAVVKGYET 514 Query: 903 DDMAQQIISDCLLGKGNQHIF------------IGLG*KNKCRNGLLSVIHVREIRRKRW 1046 D+ AQQ++++ L + F I +G + L++ +H I Sbjct: 515 DEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSG 574 Query: 1047 LTLDCCN---LYLFPASHRVISPWI----------------------------------- 1112 + L+ +P ++I W+ Sbjct: 575 FPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSL 634 Query: 1113 GIFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVS 1292 EGLPKS + IL+VVD+F+RY HF+ L HPF+A VA +M+NIYKL+G+P+ ++S Sbjct: 635 DFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLIS 694 Query: 1293 VR 1298 R Sbjct: 695 DR 696 >gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 1920 Score = 119 bits (297), Expect(2) = 1e-50 Identities = 82/228 (35%), Positives = 113/228 (49%), Gaps = 10/228 (4%) Frame = +1 Query: 31 LMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWS----I* 198 ++RKF LVFFDDILIYSP L H++HL++V + ++L + + I Sbjct: 219 VLRKFTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGHII 278 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 VT + +I + W P L G R G + K Sbjct: 279 GKDGVTTDPSKIADV--LHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKG 336 Query: 364 -RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYF 540 F+W + AF ALK A+ + PVLALPD+SK F +ETDA D G+G+VL Q++ PIA+ Sbjct: 337 VPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFV 396 Query: 541 SKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 SK LG K + LS YEKE +A+ A +WR YL +L H Sbjct: 397 SKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMH 444 Score = 109 bits (273), Expect(2) = 1e-50 Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 55/242 (22%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDD-----LYMITTVAPLWVKQVEESYEG 902 Q K +KLMGL Y++ Y+RG N DALSR+D+ L+ ++ PLW+ V + YE Sbjct: 455 QHKAFTKLMGLQYKVCYRRGTSNAAADALSRRDEETNDQLWAVSECQPLWLTAVVKGYET 514 Query: 903 DDMAQQIISDCLLGKGNQHIF------------IGLG*KNKCRNGLLSVIHVREIRRKRW 1046 D+ AQQ++++ L + F I +G + L++ +H I Sbjct: 515 DEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSG 574 Query: 1047 LTLDCCN---LYLFPASHRVISPWI----------------------------------- 1112 + L+ +P ++I W+ Sbjct: 575 FPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSL 634 Query: 1113 GIFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLPESIVS 1292 EGLPKS + IL+VVD+F+RY HF+ L HPF+A VA +M+NIYKL+G+P+ ++S Sbjct: 635 DFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLIS 694 Query: 1293 VR 1298 R Sbjct: 695 DR 696 >emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] Length = 1469 Score = 124 bits (312), Expect(2) = 3e-49 Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 7/215 (3%) Frame = +1 Query: 34 MRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRL--VCVLLLKAGWSI*AIS 207 +RKF+LVFF DIL+YS L H+ HL+ V + C + + IS Sbjct: 709 LRKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLIS 768 Query: 208 SVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKDRFR 372 + + + + W P SL G + G A+ K+ F+ Sbjct: 769 KDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTALLKKNSFK 828 Query: 373 WCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFSKGL 552 W E + AF+ LKH +++ PVLALPD+S PF ++ DAS G+G+VLMQ+ RP+AY S+ + Sbjct: 829 WTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAI 888 Query: 553 GNKQKELSIYEKELMALATAASKWRHYLAGAHLEV 657 K +LS YEKELMAL A KWR YL G + ++ Sbjct: 889 HGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKI 923 Score = 99.4 bits (246), Expect(2) = 3e-49 Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 60/247 (24%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDD------LYMITTVAPLWV-------- 875 QQKW++KL+G ++ ++YK+G ENKV DALSRK + LY IT A W+ Sbjct: 943 QQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYA 1002 Query: 876 -----KQVEESYEGDDMAQQIISD---CLLGKGNQHIFIGLG*KNKCRNGLLSVIH---- 1019 +Q+ ++ E +A Q L KG +I + R +L ++H Sbjct: 1003 IDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPAS----KELREQILYLLHSSPQ 1058 Query: 1020 ---------------------VREIRRKRWLTLDCCNLYLFPASHR--VISP-------W 1109 +R+ R+ D C H ++ P W Sbjct: 1059 GGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVW 1118 Query: 1110 IGI----FEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLP 1277 I EGLP S I++VVD+ ++Y HF+ + HP+TASK+A++F+ NI+KL+GLP Sbjct: 1119 TDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLP 1178 Query: 1278 ESIVSVR 1298 SIV+ R Sbjct: 1179 NSIVTDR 1185 >gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1348 Score = 132 bits (332), Expect(2) = 3e-49 Identities = 92/228 (40%), Positives = 120/228 (52%), Gaps = 10/228 (4%) Frame = +1 Query: 31 LMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWS----I* 198 ++RK LVFFDDIL+YSP LQ HL HLK+V + +++ + S I Sbjct: 653 VLRKCALVFFDDILVYSPDLQSHLTHLKQVLQLLRQDHWQVKMSKCSFAQPQVSYLGHII 712 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 V+ E K+IQ + W P L G + G + + K Sbjct: 713 GAQGVSTEPKKIQDV--LTWPTPISVKKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKG 770 Query: 364 -RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYF 540 FRW E+ AAF+ LK A+++ PVL LPD+SK F +ET+ASD G+G+VL QE PIAY Sbjct: 771 VSFRWGSEAEAAFQQLKQALTSAPVLGLPDFSKQFTVETNASDAGIGAVLSQEGHPIAYL 830 Query: 541 SKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH 684 SK LG + K LS YEKE MA+ A WR YL H E L+ T YH Sbjct: 831 SKALGPRSKGLSTYEKECMAILLAVDHWRSYL--QHQEFLI--LTDYH 874 Score = 91.7 bits (226), Expect(2) = 3e-49 Identities = 67/187 (35%), Positives = 92/187 (49%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDLYMITTVAPLWVKQVEESYEGDDMAQ 917 QQ+ +KL+GL Y+I Y++G+ N V DALSR+ E EG ++ Sbjct: 889 QQRAFTKLLGLQYKIGYRKGSSNAVADALSRR------------------EVGEGGQLSA 930 Query: 918 QIISDCLLGKGNQHIFIGLG*KNKCRNGLLSVIHVREIRRKRWLTLDCCNLYLFPASHRV 1097 IS C+ K + + GLL + V E W T+ Sbjct: 931 --ISVCIQAKPERVKY----------PGLLQPLPVPE---GAWQTIT------------- 962 Query: 1098 ISPWIGIFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTASKVAELFMENIYKLNGLP 1277 + EGLPKS + IL+VVD+F++Y HF+ L HPFTA VA FM+NIYKL+G+P Sbjct: 963 ----MDFLEGLPKSERYNCILVVVDKFSKYAHFVPLTHPFTAETVATAFMKNIYKLHGMP 1018 Query: 1278 ESIVSVR 1298 IVS R Sbjct: 1019 RVIVSDR 1025 >emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera] Length = 1122 Score = 122 bits (306), Expect(2) = 1e-47 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 9/210 (4%) Frame = +1 Query: 40 KFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLL----LKAGWSI*AIS 207 KFVLVFF DILIYSP HLEH+K+ F F +++ L+ I Sbjct: 346 KFVLVFFXDILIYSPNXNMHLEHVKQAFEILRQHQFFVKISKCAFGQXELEYLGHIVTXX 405 Query: 208 SVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKDRFR 372 V + +I K + W P L+ G R G A K +F Sbjct: 406 GVQVDXGKI--KAMLNWPRPTNISELHGFLGLTGYYRKFVRNYGIIARALTNLLKKGQFA 463 Query: 373 WCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYFSKGL 552 W +++ AF+ALK AM++TP LA+P++++PFV+E+DA G+G+VL Q+ +PIA+ S+ L Sbjct: 464 WTKDAETAFQALKQAMTSTPTLAMPNFNEPFVIESDALGDGIGAVLTQQGKPIAFMSRAL 523 Query: 553 GNKQKELSIYEKELMALATAASKWRHYLAG 642 G ++ SIY +E++A+ A WR YL G Sbjct: 524 GVSKRSWSIYAREMLAIVHAIQTWRPYLLG 553 Score = 96.3 bits (238), Expect(2) = 1e-47 Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 18/205 (8%) Frame = +3 Query: 738 QQKWVSKLMGLDYEIQYKRGAENKVVDALSRKDDLYMITTV----APLW----------- 872 QQ+WV+KL+G DYEI YK G EN +ALSR + + APLW Sbjct: 578 QQEWVAKLLGYDYEITYKXGRENSAENALSRVVSSPSLNALFVPQAPLWDEIKAEAIKHP 637 Query: 873 -VKQVEESYEGDDMAQQIISDCLLGKGNQHIFIGLG*KNKCRNGLLSVIHVREIRRKRW- 1046 + ++++ Q +S C + + + + L GLL + + + W Sbjct: 638 YMDKIDKLANWQQTVQDYVSSCDVCQRVKSETLALA-------GLLQPLPIPCLV---WD 687 Query: 1047 -LTLDCCNLYLFPASHRVISPWIGIFEGLPKSGGKDTILLVVDQFTRYGHFLSLIHPFTA 1223 +T+D EGLP S GK+TIL+VVD ++ HF +L HPFTA Sbjct: 688 DITMD-------------------FIEGLPTSNGKNTILVVVDHLSKSAHFFALAHPFTA 728 Query: 1224 SKVAELFMENIYKLNGLPESIVSVR 1298 VAE F+E + KL+G+P+SI+S R Sbjct: 729 KMVAEKFVEGVVKLHGMPKSIISDR 753 >gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1412 Score = 121 bits (303), Expect(2) = 1e-46 Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 10/230 (4%) Frame = +1 Query: 31 LMRKFVLVFFDDILIYSPGLQ*HLEHLKKVFSC*DNASFMLRLVCVLLLKAGWS----I* 198 ++RKF LVFFDDIL+YSP L H+ HL++V + ++L + S I Sbjct: 675 VLRKFALVFFDDILVYSPDLVSHVHHLRQVLQLLTEHQWKVKLSKCSFAQHQLSYLGHII 734 Query: 199 AISSVTREWKQIQGKGKI*WSGPCPRISLN*-----GDLENLSRVMGY*ASHYVECCNKD 363 + VT + +I+ + W+ P L G + G KD Sbjct: 735 SDQRVTTDPAKIEEV--VNWAVPKFVKKLRGFLGLAGYYRKFVKQFGILCRPLTNLLKKD 792 Query: 364 -RFRWCEESMAAFEALKHAMSTTPVLALPDWSKPFVLETDASDQGMGSVLMQEQRPIAYF 540 F W E+ AF+ALK A+ + PVL+LPD+S PF +ETDASD+G+G+VL Q PIA+ Sbjct: 793 VPFVWSVEADQAFKALKQALVSAPVLSLPDFSLPFTIETDASDEGIGAVLSQCGHPIAFL 852 Query: 541 SKGLGNKQKELSIYEKELMALATAASKWRHYLAGAHLEVLLRRCTFYH*N 690 SK LG K K LS YEKE +A+ A WR YL +L + H N Sbjct: 853 SKALGVKTKGLSTYEKEYLAILLAVDHWRSYLQQQEFVILTDHHSLMHLN 902 Score = 94.0 bits (232), Expect(2) = 1e-46 Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 55/264 (20%) Frame = +3 Query: 672 HILSLKLITSALSTRWSKESLPQQKWVSKLMGLDYEIQYKRGAENKVVDALSRK-----D 836 H + L L T W Q K +KL+GL ++I Y++G+ N +ALSRK Sbjct: 895 HHSLMHLNEQRLHTPW------QHKAFTKLLGLQFKICYRKGSSNAAANALSRKYPEELS 948 Query: 837 DLYMITTVAPLWVKQVEESYEGDDMAQQIISDCLLGKGNQHIF------------IGLG* 980 +L+++++ +P+W+++V + Y D + Q+++D L ++ F + + Sbjct: 949 ELHVVSSCSPVWLQEVSDGYLQDVFSAQLLTDLTLNAESRPNFSLCNGVLRFKGRVWIDN 1008 Query: 981 KNKCRNGLLSVIHVREIRRKRWLTLDCC---NLYLFPASHRVI----------------- 1100 ++ ++S +H + + +L+ +P + I Sbjct: 1009 NPSVQDKIISALHSSPLGGHSGFPVTYSKIKSLFAWPKMKKQIHTAVKTCGICMQAKPDH 1068 Query: 1101 SPWIGIFEGLP------------------KSGGKDTILLVVDQFTRYGHFLSLIHPFTAS 1226 S + G+ + LP KSG + IL+VVD+F++Y HF L HPF+A Sbjct: 1069 SKYPGLLQPLPVPDGAWQIITMDFIEGLPKSGQFNCILVVVDKFSKYSHFFPLSHPFSAI 1128 Query: 1227 KVAELFMENIYKLNGLPESIVSVR 1298 VA+ FM N+YKL+GLP+ I+S R Sbjct: 1129 DVAQSFMVNVYKLHGLPKFIISDR 1152