BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00022259
         (441 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   2e-21
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily p...   105   5e-21
ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi...   105   8e-21
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
emb|CBI24422.3| unnamed protein product [Vitis vinifera]              101   1e-19
ref|XP_002523876.1| pentatricopeptide repeat-containing protein,...    96   4e-18
ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containi...    96   5e-18
gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus...    95   1e-17
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]      94   2e-17
ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutr...    85   1e-14
ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata] gi...    82   1e-13
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virg...    81   1e-13
gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sati...    81   1e-13
gb|EPS65182.1| hypothetical protein M569_09592 [Genlisea aurea]        81   2e-13
ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Caps...    81   2e-13
gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya...    79   5e-13

>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Citrus sinensis]
          Length = 509

 Score =  107 bits (266), Expect = 2e-21
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = -1

Query: 219 VDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLG 40
           V+P + WTSSI+RHC+ GR++ AAL+FTRM L G  PN +TF+TLLSGCA+FP+Q +FLG
Sbjct: 42  VNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLG 101

Query: 39  AVIHGYILKLGL 4
           A+IHG + KLGL
Sbjct: 102 AMIHGLVCKLGL 113


>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05750, chloroplastic-like [Cucumis sativus]
          Length = 525

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/113 (46%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = -1

Query: 336 FFPDFYP--NPPSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGR 163
           F P   P  NP  +  P    + +   +N+ SK N ++   VDP++ WTSS+AR+C+ G+
Sbjct: 19  FTPSSIPLSNPTKLNFP---RSPNSPHRNISSKFNPNS---VDPIVLWTSSLARYCRNGQ 72

Query: 162 LSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
           LS AA +FTRMRL+G+EPN +TF+TLLS CA+FP+++ F  + +HGY  K GL
Sbjct: 73  LSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGL 125


>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cucumis sativus]
          Length = 525

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/113 (46%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = -1

Query: 336 FFPDFYP--NPPSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGR 163
           F P   P  NP  +  P    + +   +N+ SK N ++   VDP++ WTSS+AR+C+ G+
Sbjct: 19  FTPSSIPLSNPTKLNFP---RSPNSPHRNISSKFNPNS---VDPIVLWTSSLARYCRNGQ 72

Query: 162 LSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
           LS AA +FTRMRL+G+EPN +TF+TLLS CA+FP+++ F  + +HGY  K GL
Sbjct: 73  LSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGL 125


>gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 509

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 12/110 (10%)
 Frame = -1

Query: 297 IPVRRGTESKQQKNLRSKCNESNTPI------------VDPLISWTSSIARHCQKGRLST 154
           +P    T + Q  +L S+      PI            +D ++SWTSSI+RHC+ G++S 
Sbjct: 4   LPALTPTSATQPNHLVSRQTPKTQPIFSNPNHQISLKPLDHIVSWTSSISRHCRAGQISE 63

Query: 153 AALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
           AA +FTRMRLS +EPN +TFVTLLSGCA+FP ++  LG +IHGY+ KLGL
Sbjct: 64  AASEFTRMRLSEVEPNHITFVTLLSGCADFPLKSGVLGVLIHGYVCKLGL 113


>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Solanum tuberosum]
          Length = 509

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -1

Query: 312 PPSVTIPVRRGT-ESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFT 136
           PPS++ P++     +K   +  +    SN    D   SWTS IARHC+ GRL  A  +FT
Sbjct: 14  PPSLSPPLQLPQFHNKNSASASAATYRSNN---DSTASWTSLIARHCKNGRLIEAVSEFT 70

Query: 135 RMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
           RMR SG+EPN +TFVTLLSGCA+FPAQA+ LG+ +HGY  KLGL
Sbjct: 71  RMRNSGVEPNHITFVTLLSGCAHFPAQALSLGSALHGYARKLGL 114


>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Vitis vinifera]
          Length = 518

 Score =  101 bits (251), Expect = 1e-19
 Identities = 56/131 (42%), Positives = 81/131 (61%)
 Frame = -1

Query: 396 MNLPAFATIAGANQGNHPTHFFPDFYPNPPSVTIPVRRGTESKQQKNLRSKCNESNTPIV 217
           M+LPA+     ++   HP    P+  PN P  T P R    S +    RS    +++PI 
Sbjct: 1   MSLPAYTATTPSSLVTHPNSS-PNSKPNQP--TFPSR--PHSTKYHLTRS---HTHSPI- 51

Query: 216 DPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGA 37
           DP++SWTSSIA HC+ G+L  AA +F+RM+++G+ PN +TF+TLLS C +FP + +  G 
Sbjct: 52  DPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGG 111

Query: 36  VIHGYILKLGL 4
            IH Y+ KLGL
Sbjct: 112 SIHAYVRKLGL 122


>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  101 bits (251), Expect = 1e-19
 Identities = 56/131 (42%), Positives = 81/131 (61%)
 Frame = -1

Query: 396 MNLPAFATIAGANQGNHPTHFFPDFYPNPPSVTIPVRRGTESKQQKNLRSKCNESNTPIV 217
           M+LPA+     ++   HP    P+  PN P  T P R    S +    RS    +++PI 
Sbjct: 1   MSLPAYTATTPSSLVTHPNSS-PNSKPNQP--TFPSR--PHSTKYHLTRS---HTHSPI- 51

Query: 216 DPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGA 37
           DP++SWTSSIA HC+ G+L  AA +F+RM+++G+ PN +TF+TLLS C +FP + +  G 
Sbjct: 52  DPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGG 111

Query: 36  VIHGYILKLGL 4
            IH Y+ KLGL
Sbjct: 112 SIHAYVRKLGL 122


>ref|XP_002523876.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536964|gb|EEF38602.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 384

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
 Frame = -1

Query: 396 MNLPAFATIAGANQ-----GNHPTHFFPDFYPNPPSVTIPVRRGTESKQQKNLRSKCNES 232
           M++PA  + +   Q      + PT   P   P PP++  P         + NL+ +CN S
Sbjct: 1   MDVPALTSASTITQLPQRFNSKPT---PTLTPAPPNLPPPSH--LIQHPRTNLKHQCNRS 55

Query: 231 NTPIVDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQA 52
               +D  I+WTSSI+RHC  G+L  AA  FT+MRL+ +EPN +TF TL+S CA+FP Q 
Sbjct: 56  ----IDLTIAWTSSISRHCCNGQLPEAASLFTQMRLAAVEPNHITFATLISFCADFPFQG 111

Query: 51  VFLGAVIHGYILKLGL 4
             +G  IH Y+ KLGL
Sbjct: 112 KSIGPSIHAYVRKLGL 127


>ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Solanum lycopersicum]
          Length = 507

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = -1

Query: 216 DPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGA 37
           D   SWTS IARHC+ GRL  A  +FTRMR SG+EPN +TFVTLLS CA+FP QA+  G+
Sbjct: 42  DSTASWTSLIARHCKNGRLIEAVAEFTRMRNSGVEPNHITFVTLLSCCAHFPDQALSFGS 101

Query: 36  VIHGYILKLGL 4
            +HGY  KLGL
Sbjct: 102 ALHGYARKLGL 112


>gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
          Length = 514

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/110 (41%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = -1

Query: 330 PDFYPNPPSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTA 151
           P   P+PP+ + P+    ++    N +S   +S T   DP+++WTSSIA++C+ G L  A
Sbjct: 10  PTRLPHPPTPSSPISLPNQTHSHTN-QSLSLKSTTKYTDPVVAWTSSIAQYCKGGHLVKA 68

Query: 150 ALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQ-AVFLGAVIHGYILKLGL 4
           A +F RMR + IEPN +T +TLLS CA+ P+Q ++  G ++HGY  K+GL
Sbjct: 69  ASEFVRMREANIEPNHITLITLLSVCAHHPSQSSISFGTIVHGYACKMGL 118


>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
          Length = 508

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/103 (47%), Positives = 64/103 (62%)
 Frame = -1

Query: 318 PNPPSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDF 139
           P PP +++P           N     ++     ++P++ WTSSIARHC+ GR S AA +F
Sbjct: 17  PKPPPLSLP---SPTQPFFPNQHYPSHKLTYKPIEPVVKWTSSIARHCKNGRFSEAAAEF 73

Query: 138 TRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKL 10
           +RMRLSG+EPN VTFVTLLSGCA+     +  GA IHGY  KL
Sbjct: 74  SRMRLSGVEPNHVTFVTLLSGCAD---SNISFGASIHGYARKL 113


>ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 504

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/102 (43%), Positives = 63/102 (61%)
 Frame = -1

Query: 309 PSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRM 130
           P +T P+ +        N  S   +S    +D  + WTSSI++ C+ G+L+ A   F +M
Sbjct: 18  PPITTPIPK------HHNKHSVLLKSRKEQIDQTVLWTSSISQRCRNGQLAQAVSQFIQM 71

Query: 129 RLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
           R + +EPN +TFVTLLSGCA+FPA+A F G  +H Y+ KLGL
Sbjct: 72  RRARVEPNHITFVTLLSGCAHFPAKAAFFGPSLHAYVCKLGL 113


>ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutrema salsugineum]
           gi|557095763|gb|ESQ36345.1| hypothetical protein
           EUTSA_v10009524mg [Eutrema salsugineum]
          Length = 500

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/102 (42%), Positives = 63/102 (61%)
 Frame = -1

Query: 309 PSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRM 130
           PS  IP R    +++ +    K  + N    +  +SWTS I    + GRL+ AA +F+ M
Sbjct: 10  PSPAIPQRLPFVTRENQ-ANPKIQKLNQSTSETTVSWTSRITLLSRNGRLADAAKEFSDM 68

Query: 129 RLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
           RL+G+EPN +TF+ LLSGC +FP+ +  LG ++HGY  KLGL
Sbjct: 69  RLAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGL 110


>ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
           gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 500

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/88 (42%), Positives = 57/88 (64%)
 Frame = -1

Query: 267 QQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVT 88
           ++++   K    N    +  +SWTS I    + GRL+ AA +F+ MRL+G+EPN +TF+ 
Sbjct: 17  RKRHANPKIQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIA 76

Query: 87  LLSGCANFPAQAVFLGAVIHGYILKLGL 4
           +LSGC +FP+ +  LG ++HGY  KLGL
Sbjct: 77  ILSGCGDFPSGSEALGDLLHGYACKLGL 104


>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Glycine max]
          Length = 521

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 36/72 (50%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = -1

Query: 216 DPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCANFPAQ-AVFLG 40
           DP++SWT+SIA +C+ G L  AA  F +MR + IEPN +TF+TLLS CA++P++ ++  G
Sbjct: 54  DPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFG 113

Query: 39  AVIHGYILKLGL 4
             IH ++ KLGL
Sbjct: 114 TAIHAHVRKLGL 125


>gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
          Length = 485

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 38/88 (43%), Positives = 56/88 (63%)
 Frame = -1

Query: 267 QQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVT 88
           ++ +   K  + N    + ++SWTS I    + GRL+ A  +F+ MRL+GIEPN +TF+ 
Sbjct: 2   RKNHANPKIQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIA 61

Query: 87  LLSGCANFPAQAVFLGAVIHGYILKLGL 4
           LLS C NFP+ +  LG ++HGY  KLGL
Sbjct: 62  LLSACGNFPSGSEGLGYLLHGYACKLGL 89


>gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
          Length = 494

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 38/88 (43%), Positives = 57/88 (64%)
 Frame = -1

Query: 267 QQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVT 88
           ++ N+  K  + N    + ++SWTS I    +  RL+ AA +F+ MRL+GIEPN +TF++
Sbjct: 14  RKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFIS 73

Query: 87  LLSGCANFPAQAVFLGAVIHGYILKLGL 4
           LLS C NFP+ +  L  ++HGY  KLGL
Sbjct: 74  LLSACGNFPSGSEALSDLLHGYACKLGL 101


>gb|EPS65182.1| hypothetical protein M569_09592 [Genlisea aurea]
          Length = 579

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/105 (42%), Positives = 55/105 (52%)
 Frame = -1

Query: 318 PNPPSVTIPVRRGTESKQQKNLRSKCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDF 139
           P P  + +P R G +S                   P  SWT SI+R C+ GRL  +   F
Sbjct: 18  PLPLPLPLPQRHGNDS-------------------PAASWTRSISRCCKNGRLCESISLF 58

Query: 138 TRMRLSGIEPNDVTFVTLLSGCANFPAQAVFLGAVIHGYILKLGL 4
            RMR SGI PN VTFV LLSGC  FP + + LG  +HGY  K+GL
Sbjct: 59  NRMRESGIAPNRVTFVVLLSGCGRFPDRGLLLGPSLHGYARKIGL 103


>ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Capsella rubella]
           gi|482572309|gb|EOA36496.1| hypothetical protein
           CARUB_v10011161mg [Capsella rubella]
          Length = 506

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 37/81 (45%), Positives = 54/81 (66%)
 Frame = -1

Query: 246 KCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCAN 67
           K  + N    + ++SWTS I    + GRL+ AA +F+ MRL+G+EPN +TF+ LLSGC +
Sbjct: 30  KIQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSNMRLAGVEPNHITFIALLSGCGD 89

Query: 66  FPAQAVFLGAVIHGYILKLGL 4
           F + +  LG ++HGY  KLGL
Sbjct: 90  FSSGSEALGDLLHGYACKLGL 110


>gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
          Length = 491

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/81 (46%), Positives = 51/81 (62%)
 Frame = -1

Query: 246 KCNESNTPIVDPLISWTSSIARHCQKGRLSTAALDFTRMRLSGIEPNDVTFVTLLSGCAN 67
           K    N    +  +SWTS I    + GRL+ AA  F+ MRLSG+EPN +TF+ LLSGC +
Sbjct: 15  KIQRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGD 74

Query: 66  FPAQAVFLGAVIHGYILKLGL 4
           FP+ +  L  ++HGY  KLGL
Sbjct: 75  FPSGSETLSNLLHGYACKLGL 95