BLASTX nr result
ID: Catharanthus22_contig00022137
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00022137
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II tra... 135 7e-30
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247... 135 7e-30
ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II tra... 132 6e-29
ref|XP_004240641.1| PREDICTED: mediator of RNA polymerase II tra... 130 2e-28
ref|XP_006355848.1| PREDICTED: mediator of RNA polymerase II tra... 130 2e-28
emb|CBI32346.3| unnamed protein product [Vitis vinifera] 128 9e-28
gb|EPS69309.1| hypothetical protein M569_05455, partial [Genlise... 127 2e-27
ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254... 127 2e-27
gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis] 126 3e-27
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra... 126 3e-27
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216... 126 3e-27
ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citr... 126 3e-27
ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II tra... 125 4e-27
gb|EXB39334.1| hypothetical protein L484_025029 [Morus notabilis] 125 7e-27
gb|EOX94837.1| REF4-related 1, putative isoform 2 [Theobroma cacao] 124 1e-26
gb|EOX94836.1| Reduced epidermal fluorescence 4, putative isofor... 124 1e-26
ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra... 123 2e-26
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra... 123 2e-26
gb|EMJ00881.1| hypothetical protein PRUPE_ppa000301mg [Prunus pe... 123 3e-26
ref|XP_004290677.1| PREDICTED: mediator of RNA polymerase II tra... 121 8e-26
>ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1321
Score = 135 bits (339), Expect = 7e-30
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = +3
Query: 165 AMATVIQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHIC 344
A+ T Q+ L+D V+E+TK AQ GTDPL+W +QLSS L SAG SMPSTDVA+LLVSHIC
Sbjct: 2 AVVTGQQSSLWDGVIELTKLAQLKGTDPLMWAMQLSSTLNSAGHSMPSTDVASLLVSHIC 61
Query: 345 WGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
WGNN P AWKFL+KAL LRIVPPM VLALLS RVI
Sbjct: 62 WGNNDPIAWKFLEKALALRIVPPMFVLALLSNRVI 96
>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
gi|297736973|emb|CBI26174.3| unnamed protein product
[Vitis vinifera]
Length = 1305
Score = 135 bits (339), Expect = 7e-30
Identities = 65/94 (69%), Positives = 77/94 (81%)
Frame = +3
Query: 168 MATVIQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICW 347
MA + ++D +LE T AQE G+DPL+W VQLSS L+SAGVS+PS +VANLLVSHICW
Sbjct: 1 MAVSVHTSIWDNILEHTNVAQEKGSDPLLWAVQLSSSLSSAGVSLPSVEVANLLVSHICW 60
Query: 348 GNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
GNNVP AWKFL+KAL ++IVPPM VLALLS RVI
Sbjct: 61 GNNVPIAWKFLEKALMIKIVPPMPVLALLSTRVI 94
>ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum lycopersicum]
Length = 1321
Score = 132 bits (331), Expect = 6e-29
Identities = 67/95 (70%), Positives = 76/95 (80%)
Frame = +3
Query: 165 AMATVIQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHIC 344
AM T Q+ L+D V+E+TK AQ GTDPL+W +QLSS L SAG S+PSTDVANLLVSHIC
Sbjct: 2 AMVTGKQSSLWDGVIELTKLAQLKGTDPLMWAMQLSSTLNSAGHSLPSTDVANLLVSHIC 61
Query: 345 WGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
W NN P AWK L+KAL LRIVPPM VLALLS RV+
Sbjct: 62 WDNNDPIAWKLLEKALALRIVPPMFVLALLSNRVV 96
>ref|XP_004240641.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum lycopersicum]
Length = 1336
Score = 130 bits (327), Expect = 2e-28
Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Frame = +3
Query: 168 MATV-IQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHIC 344
M TV +++ +D V E+TK AQE TDPLVW ++LSS L SAG+SMPSTDVA LLVSHIC
Sbjct: 1 METVTVRSSQWDRVTELTKLAQERNTDPLVWAMELSSSLNSAGISMPSTDVAELLVSHIC 60
Query: 345 WGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
W NNVP AWK L+KAL RIVPP+ VLALLS RVI
Sbjct: 61 WSNNVPNAWKLLEKALVFRIVPPLFVLALLSTRVI 95
>ref|XP_006355848.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1373
Score = 130 bits (326), Expect = 2e-28
Identities = 65/95 (68%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +3
Query: 168 MATV-IQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHIC 344
M TV + + +D V E+TK AQE TDPLVW ++LSS L SAG+SMPSTDVA LLVSHIC
Sbjct: 1 METVTVHSSQWDRVTELTKLAQERNTDPLVWAMELSSSLNSAGISMPSTDVAELLVSHIC 60
Query: 345 WGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
W NNVP AWK L+KAL RIVPP+ VLALLS RVI
Sbjct: 61 WSNNVPNAWKLLEKALVFRIVPPLFVLALLSTRVI 95
>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
Length = 1388
Score = 128 bits (321), Expect = 9e-28
Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 13/118 (11%)
Frame = +3
Query: 135 TFQKQRLLFPAMA--TVI-----------QAPLFDEVLEMTKAAQEMGTDPLVWGVQLSS 275
T K+R LF + A TV+ Q L+D VLE+TK+AQE +DPL+W VQLSS
Sbjct: 38 TTNKERKLFLSFAGMTVVSVQACQLSQSTQPGLWDSVLELTKSAQERNSDPLLWAVQLSS 97
Query: 276 ILTSAGVSMPSTDVANLLVSHICWGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
IL SAG S+PS ++A+LLVSHICW NNVP WKFL+KA++ RI PPMLVLALLS RVI
Sbjct: 98 ILNSAGTSLPSPELAHLLVSHICWANNVPITWKFLEKAVSGRIAPPMLVLALLSSRVI 155
>gb|EPS69309.1| hypothetical protein M569_05455, partial [Genlisea aurea]
Length = 353
Score = 127 bits (319), Expect = 2e-27
Identities = 57/84 (67%), Positives = 73/84 (86%)
Frame = +3
Query: 195 FDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQAWK 374
+DE+LEMTKAAQE G DPLVW V+L+++L + GVS+PS +VA ++VSHICW NNVP AWK
Sbjct: 13 WDEILEMTKAAQERGADPLVWAVELTTVLNAFGVSVPSIEVAEMIVSHICWSNNVPIAWK 72
Query: 375 FLDKALTLRIVPPMLVLALLSIRV 446
+L+KAL++R+VPPM VLALLS RV
Sbjct: 73 YLEKALSIRVVPPMFVLALLSARV 96
>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
Length = 1321
Score = 127 bits (319), Expect = 2e-27
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +3
Query: 183 QAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVP 362
Q L+D VLE+TK+AQE +DPL+W VQLSSIL SAG S+PS ++A+LLVSHICW NNVP
Sbjct: 16 QPGLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVP 75
Query: 363 QAWKFLDKALTLRIVPPMLVLALLSIRVI 449
WKFL+KA++ RI PPMLVLALLS RVI
Sbjct: 76 ITWKFLEKAVSGRIAPPMLVLALLSSRVI 104
>gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis]
Length = 1285
Score = 126 bits (317), Expect = 3e-27
Identities = 60/93 (64%), Positives = 74/93 (79%)
Frame = +3
Query: 168 MATVIQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICW 347
MA ++ ++D VLE+TK AQ+ G+DPLVW +QLSS L S GVS+PS +VAN LVS+ICW
Sbjct: 1 MAVCVERSVWDSVLELTKVAQQKGSDPLVWAIQLSSNLNSMGVSLPSVEVANALVSYICW 60
Query: 348 GNNVPQAWKFLDKALTLRIVPPMLVLALLSIRV 446
NNVP WKFL+KAL +IVPP+LVLALLS RV
Sbjct: 61 ENNVPIVWKFLEKALVFKIVPPLLVLALLSSRV 93
>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cucumis sativus]
Length = 1311
Score = 126 bits (317), Expect = 3e-27
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 168 MATVIQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICW 347
MA +Q L+D V E+TK AQ+ G DPL+W +QLSS L SAGV +PS ++ANLLVSHICW
Sbjct: 1 MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60
Query: 348 GNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
NN P +WKFL+KAL L IVPP+LVLALL+ RVI
Sbjct: 61 DNNEPVSWKFLEKALILNIVPPILVLALLTTRVI 94
>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 126 bits (317), Expect = 3e-27
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 168 MATVIQAPLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICW 347
MA +Q L+D V E+TK AQ+ G DPL+W +QLSS L SAGV +PS ++ANLLVSHICW
Sbjct: 1 MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60
Query: 348 GNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
NN P +WKFL+KAL L IVPP+LVLALL+ RVI
Sbjct: 61 DNNEPVSWKFLEKALILNIVPPILVLALLTTRVI 94
>ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citrus clementina]
gi|568872251|ref|XP_006489285.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A-like [Citrus
sinensis] gi|557521672|gb|ESR33039.1| hypothetical
protein CICLE_v10006738mg [Citrus clementina]
Length = 1331
Score = 126 bits (316), Expect = 3e-27
Identities = 59/86 (68%), Positives = 75/86 (87%)
Frame = +3
Query: 192 LFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQAW 371
++D V+E+TK AQE G+DPL+W VQLSS L SAGVS+PS ++A++LVS+ICW NNVP AW
Sbjct: 15 VWDNVMEVTKVAQEKGSDPLLWAVQLSSSLNSAGVSLPSVELAHVLVSYICWDNNVPIAW 74
Query: 372 KFLDKALTLRIVPPMLVLALLSIRVI 449
KF++KALTLRI PP+L+LALLS RVI
Sbjct: 75 KFVEKALTLRIAPPLLLLALLSTRVI 100
>ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Fragaria vesca subsp. vesca]
Length = 1322
Score = 125 bits (315), Expect = 4e-27
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +3
Query: 192 LFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQAW 371
++D V+E+TK AQ+ G+DPLVW +QLSS L+S GVS+PS D+AN+LVSHICW NNVP W
Sbjct: 6 IWDSVVELTKVAQQKGSDPLVWVLQLSSNLSSRGVSLPSVDLANVLVSHICWENNVPIMW 65
Query: 372 KFLDKALTLRIVPPMLVLALLSIRVI 449
KFL+KAL L+IVPPM+VLALLS RVI
Sbjct: 66 KFLEKALMLKIVPPMIVLALLSQRVI 91
>gb|EXB39334.1| hypothetical protein L484_025029 [Morus notabilis]
Length = 1330
Score = 125 bits (313), Expect = 7e-27
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = +3
Query: 192 LFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQAW 371
L+D VLE+TK+AQE DP+VW +QLSS L SAG+ +PS D+A+LLV+HICW N+VP W
Sbjct: 13 LWDTVLEITKSAQEKNCDPVVWAIQLSSCLNSAGIPLPSPDLAHLLVNHICWANHVPITW 72
Query: 372 KFLDKALTLRIVPPMLVLALLSIRVI 449
KFL+KAL L+I PPMLVLALLS+RVI
Sbjct: 73 KFLEKALALKIAPPMLVLALLSVRVI 98
>gb|EOX94837.1| REF4-related 1, putative isoform 2 [Theobroma cacao]
Length = 967
Score = 124 bits (312), Expect = 1e-26
Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 MATVIQA--PLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHI 341
MA IQA P+++ VLE TK+AQ +DPL+W VQLSS L SAGVS+PS D+A+LLVSHI
Sbjct: 1 MAVSIQAASPVWESVLEQTKSAQGKNSDPLLWAVQLSSSLNSAGVSLPSIDLAHLLVSHI 60
Query: 342 CWGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
CW N+VP WK+L+KA+T++ VPP+LVLALLS RVI
Sbjct: 61 CWDNHVPITWKYLEKAMTVKFVPPILVLALLSTRVI 96
>gb|EOX94836.1| Reduced epidermal fluorescence 4, putative isoform 1 [Theobroma
cacao]
Length = 1334
Score = 124 bits (312), Expect = 1e-26
Identities = 62/96 (64%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 MATVIQA--PLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHI 341
MA IQA P+++ VLE TK+AQ +DPL+W VQLSS L SAGVS+PS D+A+LLVSHI
Sbjct: 1 MAVSIQAASPVWESVLEQTKSAQGKNSDPLLWAVQLSSSLNSAGVSLPSIDLAHLLVSHI 60
Query: 342 CWGNNVPQAWKFLDKALTLRIVPPMLVLALLSIRVI 449
CW N+VP WK+L+KA+T++ VPP+LVLALLS RVI
Sbjct: 61 CWDNHVPITWKYLEKAMTVKFVPPILVLALLSTRVI 96
>ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33B-like [Cucumis sativus]
Length = 739
Score = 123 bits (309), Expect = 2e-26
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +3
Query: 186 APLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQ 365
A L+D VLE+TK+AQ+ DPL+W VQLSS L SAGVS+PS ++A LLVSHICW N+VP
Sbjct: 15 AGLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPI 74
Query: 366 AWKFLDKALTLRIVPPMLVLALLSIRVI 449
WKFL+KA+T RIVPP+LV+ALLS R I
Sbjct: 75 MWKFLEKAMTARIVPPLLVIALLSTRAI 102
>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cucumis sativus]
Length = 1335
Score = 123 bits (309), Expect = 2e-26
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +3
Query: 186 APLFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQ 365
A L+D VLE+TK+AQ+ DPL+W VQLSS L SAGVS+PS ++A LLVSHICW N+VP
Sbjct: 15 AGLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPI 74
Query: 366 AWKFLDKALTLRIVPPMLVLALLSIRVI 449
WKFL+KA+T RIVPP+LV+ALLS R I
Sbjct: 75 MWKFLEKAMTARIVPPLLVIALLSTRAI 102
>gb|EMJ00881.1| hypothetical protein PRUPE_ppa000301mg [Prunus persica]
Length = 1313
Score = 123 bits (308), Expect = 3e-26
Identities = 59/95 (62%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
Frame = +3
Query: 168 MATVIQAPL---FDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSH 338
MA +Q PL +D VL++TK+AQ+ +DPL+W VQLS+ L SAGV++PS ++A+LLVSH
Sbjct: 2 MAVSVQQPLSHLWDTVLQLTKSAQDKNSDPLLWAVQLSNSLNSAGVALPSVELAHLLVSH 61
Query: 339 ICWGNNVPQAWKFLDKALTLRIVPPMLVLALLSIR 443
ICW N+VP WKFL+KALT++IVPPMLVLALLS +
Sbjct: 62 ICWANHVPITWKFLEKALTVKIVPPMLVLALLSTK 96
>ref|XP_004290677.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33B-like [Fragaria vesca subsp. vesca]
Length = 1331
Score = 121 bits (304), Expect = 8e-26
Identities = 56/86 (65%), Positives = 73/86 (84%)
Frame = +3
Query: 192 LFDEVLEMTKAAQEMGTDPLVWGVQLSSILTSAGVSMPSTDVANLLVSHICWGNNVPQAW 371
L+D VL +TK+AQ+ +DPL+W +QLSS L SA VS+PS ++A+LLVSHICW N+VP W
Sbjct: 13 LWDSVLHLTKSAQDKNSDPLLWALQLSSSLNSAAVSLPSVELAHLLVSHICWANHVPITW 72
Query: 372 KFLDKALTLRIVPPMLVLALLSIRVI 449
KFL+KALT++IVPPMLVLALLS +V+
Sbjct: 73 KFLEKALTVKIVPPMLVLALLSTKVV 98