BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00022053
         (734 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297...    82   2e-13
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              80   5e-13
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              80   5e-13
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...    79   2e-12
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              78   3e-12
ref|XP_004301203.1| PREDICTED: uncharacterized protein LOC101302...    77   6e-12
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    77   6e-12
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    77   6e-12
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   2e-11
ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein A...    75   3e-11
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...    74   4e-11
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    74   6e-11
ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein A...    73   8e-11
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...    73   8e-11
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...    73   8e-11
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   1e-10
gb|EOY32759.1| Ribonuclease H protein, putative [Theobroma cacao]      72   1e-10
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    72   1e-10
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    72   1e-10
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...    71   4e-10

>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
            subsp. vesca]
          Length = 1096

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
 Frame = -2

Query: 643  DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
            + +C  K  GGLGF   R  N A +AK G +L R  +    +++K+RY       + E  
Sbjct: 607  EKLCTTKAEGGLGFRDMRLFNMALLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAEVA 666

Query: 463  ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQSCR 284
            + GCS+ WRSI   R++L KGL  Q G      +  DPWIP         P +   +  R
Sbjct: 667  K-GCSFTWRSILKGRDLLKKGLRFQVGNGESISVWDDPWIPLPYSFRPYSPPMEGTEELR 725

Query: 283  RLD--EH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY* 110
              D  +      N  L+  LF     +   R  ++    +D ++W     G YSV+S Y 
Sbjct: 726  VCDLIDPDTGDWNVWLLNELFMGNEVDIIARIALSNGGGEDRMVWHFDNKGVYSVKSGYH 785

Query: 109  NA----QQERFDNNSDIESG---LWKKVLG 41
             A    Q   F + SD  +G   L+K++ G
Sbjct: 786  VARMTNQPGNFASTSDSNNGTRTLYKRIWG 815


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
 Frame = -2

Query: 637  ICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESCES 458
            IC P+  GGLG  + RD N+AF+ K+  Q+  N DK W+K+++ +Y++      L+S +S
Sbjct: 848  ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQS-QS 906

Query: 457  GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQSCRRL 278
             CSW WRSI   ++VL   +    G         D W+      +N   +   + +  ++
Sbjct: 907  NCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKV 966

Query: 277  DEH*IRLLNSNL---VCSLFNSEVANAGLRTHITPL----EEQDSVLWCLSTSGDYSVRS 119
            ++    L+ S       +L N    N       TP+    E++D + W  ST+G  +V S
Sbjct: 967  ED----LITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSS 1022

Query: 118  AY 113
            AY
Sbjct: 1023 AY 1024


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
 Frame = -2

Query: 637  ICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESCES 458
            IC P+  GGLG  + RD N+AF+ K+  Q+  N DK W+K+++ +Y++      L+S +S
Sbjct: 848  ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQS-QS 906

Query: 457  GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQSCRRL 278
             CSW WRSI   ++VL   +    G         D W+      +N   +   + +  ++
Sbjct: 907  NCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKV 966

Query: 277  DEH*IRLLNSNL---VCSLFNSEVANAGLRTHITPL----EEQDSVLWCLSTSGDYSVRS 119
            ++    L+ S       +L N    N       TP+    E++D + W  ST+G  +V S
Sbjct: 967  ED----LITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSS 1022

Query: 118  AY 113
            AY
Sbjct: 1023 AY 1024


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 2/179 (1%)
 Frame = -2

Query: 643 DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
           + +  PK +GG+GF   R  N A I K   +L  N D    KL+K++Y      +   S 
Sbjct: 6   ERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFS-ASI 64

Query: 463 ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWI--PSLTGTTNNYPVV*KYQS 290
               S+VWRS+W  R+ L  GL    G      +   PW+  P          ++    +
Sbjct: 65  GHNPSYVWRSLWSVRDYLKHGLKWSIGMGETISVWNQPWLKDPLCLQPVTEVQIMWDALT 124

Query: 289 CRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY 113
              L +   +  N N +  +FN+E +N  L+T +    + D   W    +G YSVRSAY
Sbjct: 125 VGHLFKPNTKEWNENFIRYVFNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAY 183


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
 Frame = -2

Query: 637  ICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESCES 458
            IC P+  GGLG  + RD N+AF+ K+  Q+  N DK W+K+++ +Y++      L+S +S
Sbjct: 1380 ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQS-QS 1438

Query: 457  GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQSCRRL 278
             CSW WRSI   ++VL   +    G         D W+      +N   +   + +  ++
Sbjct: 1439 NCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKV 1498

Query: 277  DEH*IRLLNSNL---VCSLFNSEVANAGLRTHITPL----EEQDSVLWCLSTSGDYSVRS 119
            ++    L  S       +L N    N       TP+    E++D   W  ST+G  +V S
Sbjct: 1499 ED----LTTSQRRWDTGALHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSS 1554

Query: 118  AY 113
            AY
Sbjct: 1555 AY 1556


>ref|XP_004301203.1| PREDICTED: uncharacterized protein LOC101302660 [Fragaria vesca
           subsp. vesca]
          Length = 540

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
 Frame = -2

Query: 649 SGDSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLE 470
           S D +  PK  GGLGF   +  N A +AK   +L  N    W +++KSRY      +   
Sbjct: 316 SWDFLSQPKADGGLGFRNLQHFNMALLAKQVWKLVENPTSLWAEVLKSRYFPDCNFF--- 372

Query: 469 SCESG--CSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KY 296
           S   G   SW W S+ ++R+++L G C Q    S  R+ +D W+P      N  P +   
Sbjct: 373 SALKGYRASWSWSSLLEARDIILAGCCWQVVNGSSVRVWQDKWLP------NPSPRLLPS 426

Query: 295 QSCRRLDEH*I---------RLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLST 143
            +  RL  H +         ++ N + +      EVA       I  ++ QD ++W    
Sbjct: 427 STVSRLTAHVLVNQLIDWERKVWNLSDILGSIGREVAEQIQEMPIGEIDGQDRLIWPHDK 486

Query: 142 SGDYSVRSAY 113
           S +Y+VRS Y
Sbjct: 487 SRNYTVRSGY 496


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
 Frame = -2

Query: 637  ICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESCES 458
            +  PK  GG+GF  F   N+A + +   +L  + D    +++K RY      W+    +S
Sbjct: 859  LSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKS 918

Query: 457  GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWI----PSLTGTTNNYPVV*KYQS 290
              S+ WRS+   RE+L KG+    G     +I  D WI    P L  T + +P      S
Sbjct: 919  P-SFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTD-ATVS 976

Query: 289  CRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY* 110
            C   ++   R  + +L+ SLF  ++A   L+  I+   + D   W     G YSVRSAY 
Sbjct: 977  CLMNED--ARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYN 1034

Query: 109  NAQQERF 89
             A+ E F
Sbjct: 1035 LARSEAF 1041


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
 Frame = -2

Query: 637  ICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESCES 458
            +  PK  GG+GF  F   N+A + +   +L  + D    +++K RY      W+    +S
Sbjct: 816  LSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKS 875

Query: 457  GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWI----PSLTGTTNNYPVV*KYQS 290
              S+ WRS+   RE+L KG+    G     +I  D WI    P L  T + +P      S
Sbjct: 876  P-SFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTD-ATVS 933

Query: 289  CRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY* 110
            C   ++   R  + +L+ SLF  ++A   L+  I+   + D   W     G YSVRSAY 
Sbjct: 934  CLMNED--ARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYN 991

Query: 109  NAQQERF 89
             A+ E F
Sbjct: 992  LARSEAF 998


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 53/214 (24%), Positives = 92/214 (42%)
 Frame = -2

Query: 643  DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
            DS+C  K +GG+GF   R  N A + +   +L R       +++K++Y       D    
Sbjct: 846  DSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLG 905

Query: 463  ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQSCR 284
             S  S+ WRSIW S+ +L +G+  + G  +  RI +DPW+    G               
Sbjct: 906  VS-TSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWVLDELGRFITSEKHGNLNMVS 964

Query: 283  RLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY*NA 104
             L +        +L+ ++FN       L   ++ L  +D + W  + +  YSV++AY   
Sbjct: 965  ELIDFDRMEWKVSLIETVFNERDIKCILSIPLSSLPLKDELTWAFTKNAHYSVKTAYMLG 1024

Query: 103  QQERFDNNSDIESGLWKKVLGC*DYNRLKHFLLR 2
            +    D+       +W   +      ++KHFL R
Sbjct: 1025 KGGNLDSFHQAWIDIWSMEVS----PKVKHFLWR 1054


>ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 677

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
 Frame = -2

Query: 655 FTSGDSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWD 476
           F S DS+C  K  GG+GF      NKAF+ K   +L +N +  W +++K RY        
Sbjct: 214 FRSWDSVCKSKSAGGIGFKDLAVFNKAFLGKQCWRLIKNPNSLWCRVLKGRYFENSNFVH 273

Query: 475 LESCESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTG-------TTNN 317
            +   S  SWVW S+   ++ +      Q   +    + KD W+P+  G       T+N 
Sbjct: 274 AKK-GSRPSWVWNSLLAGQDTITSNAFWQVRNRQSIEVWKDRWVPNSIGGSIIPIDTSNR 332

Query: 316 YPVV*KYQSCRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSG 137
           +  +   +      E  I  L   L  S FNS  A       I    E+D ++W  S S 
Sbjct: 333 FTPLLVAEVIDENREWQIDHLKPFLRDSDFNSIKA-----IPIGAASERDVLVWPHSKSE 387

Query: 136 DYSVRSAY 113
           +YSVRS Y
Sbjct: 388 NYSVRSGY 395


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
 Frame = -2

Query: 643 DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
           + +  PK  GGLGF      N A +AK G +L +  +    +++K++Y     + D +  
Sbjct: 152 EQLLKPKEEGGLGFRDIHSFNMAMLAKQGWRLLKEPESLCARVLKAKYHPNGSVLDAQP- 210

Query: 463 ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTG----TTNNYPVV*KY 296
             G S+ WRSI    EV+ KG+  + G  +G  I  DPW+P        T   + +V   
Sbjct: 211 RRGMSYSWRSILLGLEVVKKGMIWRVGDGAGIHIWSDPWLPRDESRKPLTPRGHSLV--- 267

Query: 295 QSCRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSA 116
           +S   L +      +  LV  LF  E A   L   I    E + + W     G +SV+SA
Sbjct: 268 ESVDELIDPHTGTWDEQLVSDLFWEEDAAVILALPIHQGRE-NFISWHFEKLGIFSVKSA 326

Query: 115 Y*NAQQERFDNN---------SDIESGLWKKVLGC*DYNRLKHFLLR 2
           Y  A++   ++N         S     +WK +      N+LKHFL R
Sbjct: 327 YRVARKMVINSNTANGQQGSTSRGVDSVWKSIWRLKCPNKLKHFLWR 373


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
 Frame = -2

Query: 643  DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
            D +C+ K  GGLGF    D N A +AK   +L    D  + K+ K RY   RK   L+S 
Sbjct: 626  DKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYF--RKSNPLDSI 683

Query: 463  ES-GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNY--PVV*KYQ 293
            +S   S+ WRS+  +R ++ KGL  + G  +   +  DPWIP+       Y   +V    
Sbjct: 684  KSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQFPRPAKYGGSIVDPSL 743

Query: 292  SCRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY 113
              + L +      N +L+  LF+ E         I     +D++ W  + +G+Y+V+S Y
Sbjct: 744  KVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGY 803

Query: 112  *NAQQERFDNN-------SDIESGLWKKVLGC*DYNRLKHFL 8
              A+ +  +         + +++ +WK  + C    +L+HFL
Sbjct: 804  HTARLDLNEGTTLIGPDLTTLKAYIWK--VQC--PPKLRHFL 841


>ref|XP_006478726.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 473

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
 Frame = -2

Query: 637 ICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESCES 458
           +C  K+ GGLGF  F   N A +AK G +L  N D    K++K++Y       + +   S
Sbjct: 1   MCHAKIRGGLGFRDFSSFNHALLAKQGWRLLHNPDSLMAKILKAKYFSHSGFMEAK-LGS 59

Query: 457 GCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQSCRRL 278
             S+VWRSI   RE+L +GL  + G  +        W+ ++ G+  + P     +     
Sbjct: 60  KPSFVWRSIIWGRELLQEGLRWRIGQGTKISACSKIWLRNV-GSCTSIPPSNSLKDVVVA 118

Query: 277 DE-H*IRLLNSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDYSVRSAY*NAQ 101
           D  + I     + +  L+  E++   ++  +    ++D ++W     G Y+V+S Y  A 
Sbjct: 119 DLINDINQWKEDKIAQLYPKEISERIVKLPLPKTPQEDILIWRFDKHGTYTVKSGYQLAV 178

Query: 100 QERFDNN---SDIESGLWKKVLGC*DYNRLKHFLLR 2
           Q +F  N   SD     WK +       ++K F+ R
Sbjct: 179 QLKFPENPGCSDASKSQWKVIWSTEIPEKVKIFMWR 214


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
 Frame = -2

Query: 643 DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
           D I  PK  GGLGF      N A +A+ G +L +N D    +L+K++Y     + D +S 
Sbjct: 232 DKIMKPKSQGGLGFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSR 291

Query: 463 ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIP-SLTGTTNNYPVV*KYQSC 287
           +   S+ WRSI    ++L KG+  + G      I  DPW+P  +   T         + C
Sbjct: 292 KQ-MSYSWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRDMRFVTTRRGASLITRVC 350

Query: 286 RRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEE--QDSVLWCLSTSGDYSVRSAY 113
             +D       +  L+  +FN    +A + T I PL E  +D + W   T G +SV+SAY
Sbjct: 351 ELIDPT-TGQWDIELIQQIFNEN--DAKIITRI-PLREGQEDFIAWQPDTKGIFSVKSAY 406


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
 Frame = -2

Query: 643 DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
           D I  PK  GGLGF      N A +A+ G +L +N D    +L+K++Y     + D +S 
Sbjct: 363 DKIMKPKSQGGLGFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSR 422

Query: 463 ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIP-SLTGTTNNYPVV*KYQSC 287
           +   S+ WRSI    ++L KG+  + G      I  DPW+P  +   T         + C
Sbjct: 423 KQ-MSYSWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRDMRFVTTRRGASLITRVC 481

Query: 286 RRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEE--QDSVLWCLSTSGDYSVRSAY 113
             +D       +  L+  +FN    +A + T I PL E  +D + W   T G +SV+SAY
Sbjct: 482 ELIDPT-TGQWDIELIQQIFNEN--DAKIITRI-PLREGQEDFIAWQPDTKGIFSVKSAY 537


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 11/227 (4%)
 Frame = -2

Query: 649  SGDSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLE 470
            S D++C PK  GGLGF      N++ +AK   +LC  D     +L+++RY +  ++ +  
Sbjct: 843  SWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLEAR 902

Query: 469  SCESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYPVV*KYQS 290
               +  S+ WRSIW S+ +LL+GL    G     R+ +D WI           +V   Q+
Sbjct: 903  RGYNP-SFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDAWI-----LGEGAHMVPTPQA 956

Query: 289  CRRLDEH*IRLL-------NSNLVCSLFNSEVANAGLRTHITPLEEQDSVLWCLSTSGDY 131
               LD     L+       N   V   F  E     L   ++     D   W  S +G +
Sbjct: 957  DSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIF 1016

Query: 130  SVRSAY*NAQQERFD----NNSDIESGLWKKVLGC*DYNRLKHFLLR 2
            SVRS Y   +          + + E+ LW++V       +L HFL R
Sbjct: 1017 SVRSCYWLGRLGPVRTWQLQHGERETELWRRVWQLQGPPKLSHFLWR 1063


>gb|EOY32759.1| Ribonuclease H protein, putative [Theobroma cacao]
          Length = 337

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
 Frame = -2

Query: 649 SGDSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLE 470
           S + +C+PK  GGL     R +N A + KLG +L  + +  W+ +++ +YLR   +  + 
Sbjct: 20  SWEKLCSPKEEGGLQLRNLRFLNLALLGKLGWRLLMDTNHLWVDMLQKKYLRDDNLMTV- 78

Query: 469 SCESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIP----------SLTGTTN 320
           + +S  S VWRSI  +R +L KGL          R   D W+            ++    
Sbjct: 79  TAKSSDSHVWRSILKARYILEKGLGKVVTNGIATRFWVDSWLDCGPLIDYANRDISNIEA 138

Query: 319 NYPVV*KYQSCRRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITP-LEEQDSVLWCLST 143
           N PVV     C    +  +  LN  L   +    VA       I P  ++ D+ +W  ++
Sbjct: 139 NLPVV---SFCDESGQWDLEYLNQVLPLHIVLRIVA-----VLIDPKSDKDDATVWIFTS 190

Query: 142 SGDYSVRSAY*NAQQERFDNNSDIESGLWK 53
           +G+++V SAY  +QQ     NS     +WK
Sbjct: 191 NGEFTVNSAY-KSQQVSTGANSSFWKTIWK 219


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 14/237 (5%)
 Frame = -2

Query: 670 ESESTFTSGDSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRG 491
           E++  + S + +  PK  GGLGF      N A +AK G +L +N +    +++K++Y   
Sbjct: 71  ENKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPS 130

Query: 490 RKIWDLESCESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYP 311
             I+  + C +  S+ WRSI      L  G+  + G  +   I  DPWIPS        P
Sbjct: 131 GNIFSAKKC-ANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPS---DHTRRP 186

Query: 310 VV*KYQSCRRLDEH*IRLLNSN----LVCSLFNSEVANAGLRTHITPLEEQDSVLWCLST 143
           +  + ++     E  I     +    L+   F  E  N  +RT    +E  D + W    
Sbjct: 187 ITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNM-IRTIPVHIEMDDMLAWHYDE 245

Query: 142 SGDYSVRSAY----*NAQQERFDNNSDIESG------LWKKVLGC*DYNRLKHFLLR 2
            G +SV+SAY        Q R   ++ + +G       WKKV       ++KHF+ R
Sbjct: 246 KGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWR 302


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 14/237 (5%)
 Frame = -2

Query: 670  ESESTFTSGDSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRG 491
            E++  + S + +  PK  GGLGF      N A +AK G +L +N +    +++K++Y   
Sbjct: 964  ENKMHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPS 1023

Query: 490  RKIWDLESCESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIPSLTGTTNNYP 311
              I+  + C +  S+ WRSI      L  G+  + G  +   I  DPWIPS        P
Sbjct: 1024 GNIFSAKKC-ANMSYTWRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPS---DHTRRP 1079

Query: 310  VV*KYQSCRRLDEH*IRLLNSN----LVCSLFNSEVANAGLRTHITPLEEQDSVLWCLST 143
            +  + ++     E  I     +    L+   F  E  N  +RT    +E  D + W    
Sbjct: 1080 ITPRGRNLVTRVEELIDPSTGSWDVELLTQTFWPEDVNM-IRTIPVHIEMDDMLAWHYDE 1138

Query: 142  SGDYSVRSAY----*NAQQERFDNNSDIESG------LWKKVLGC*DYNRLKHFLLR 2
             G +SV+SAY        Q R   ++ + +G       WKKV       ++KHF+ R
Sbjct: 1139 KGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWR 1195


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
 Frame = -2

Query: 643 DSICAPKLYGGLGFLLFRDVNKAFIAKLGCQLCRNDDKQWIKLIKSRYLRGRKIWDLESC 464
           D I  PK  GGL F      N A +A+ G +L +N D    +L+K++Y     + D +S 
Sbjct: 363 DKIMKPKSQGGLAFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSR 422

Query: 463 ESGCSWVWRSIWDSREVLLKGLCLQAGGQSGFRIMKDPWIP-SLTGTTNNYPVV*KYQSC 287
           +   S+ WRSI    ++L KG+  + G      I  DPW+P  +   T         + C
Sbjct: 423 KQ-MSYSWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRDMRFVTTRRGASLITRVC 481

Query: 286 RRLDEH*IRLLNSNLVCSLFNSEVANAGLRTHITPLEE--QDSVLWCLSTSGDYSVRSAY 113
             +D       +  L+  +FN    +A + T I PL E  +D + W   T G +SV+SAY
Sbjct: 482 ELIDPT-TGQWDIELIQQIFNEN--DAKIITRI-PLREGQEDFIAWQPDTKGIFSVKSAY 537