BLASTX nr result
ID: Catharanthus22_contig00022047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00022047
(598 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16134.3| unnamed protein product [Vitis vinifera] 166 6e-39
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi... 166 6e-39
ref|XP_006347409.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_006347408.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_006347407.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_006488325.1| PREDICTED: pentatricopeptide repeat-containi... 159 5e-37
ref|XP_006424825.1| hypothetical protein CICLE_v10028134mg [Citr... 159 5e-37
ref|XP_004241523.1| PREDICTED: pentatricopeptide repeat-containi... 158 9e-37
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi... 155 1e-35
gb|EOY18767.1| Tetratricopeptide repeat (TPR)-like superfamily p... 152 5e-35
ref|XP_006417788.1| hypothetical protein EUTSA_v10007326mg [Eutr... 149 6e-34
gb|EXC10650.1| hypothetical protein L484_025231 [Morus notabilis] 149 7e-34
gb|ESW22317.1| hypothetical protein PHAVU_005G143900g [Phaseolus... 148 1e-33
ref|XP_004294523.1| PREDICTED: pentatricopeptide repeat-containi... 147 2e-33
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi... 147 2e-33
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,... 147 2e-33
ref|XP_002892408.1| pentatricopeptide repeat-containing protein ... 147 2e-33
ref|XP_002314181.2| hypothetical protein POPTR_0009s03620g [Popu... 147 3e-33
ref|XP_006307211.1| hypothetical protein CARUB_v10008810mg [Caps... 146 5e-33
gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana] 144 2e-32
>emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 166 bits (419), Expect = 6e-39
Identities = 79/97 (81%), Positives = 90/97 (92%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G+ L +T++R+S PWLETTLSIVEIF+ENGDVEN EKLF+ELK ANYTRYTFVYNTLIK
Sbjct: 355 GKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIK 414
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAKV++PNLLRRMILGG+RPDAETYSL+KL EQF
Sbjct: 415 AYVKAKVYDPNLLRRMILGGARPDAETYSLMKLAEQF 451
>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 166 bits (419), Expect = 6e-39
Identities = 79/97 (81%), Positives = 90/97 (92%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G+ L +T++R+S PWLETTLSIVEIF+ENGDVEN EKLF+ELK ANYTRYTFVYNTLIK
Sbjct: 452 GKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIK 511
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAKV++PNLLRRMILGG+RPDAETYSL+KL EQF
Sbjct: 512 AYVKAKVYDPNLLRRMILGGARPDAETYSLMKLAEQF 548
>ref|XP_006347409.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 419
Score = 160 bits (405), Expect = 2e-37
Identities = 75/97 (77%), Positives = 89/97 (91%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G D+ + KV+RSTPWLETTLSI+EIFA+NGDVEN EKLF+ELK ANYTRYTFVYN LIK
Sbjct: 321 GMDMETSIKVKRSTPWLETTLSIIEIFADNGDVENAEKLFEELKKANYTRYTFVYNALIK 380
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVK KV++PNLL+RMILGG+RPD+E+YSLLK+I+QF
Sbjct: 381 AYVKGKVYDPNLLKRMILGGARPDSESYSLLKVIDQF 417
>ref|XP_006347408.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 423
Score = 160 bits (405), Expect = 2e-37
Identities = 75/97 (77%), Positives = 89/97 (91%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G D+ + KV+RSTPWLETTLSI+EIFA+NGDVEN EKLF+ELK ANYTRYTFVYN LIK
Sbjct: 325 GMDMETSIKVKRSTPWLETTLSIIEIFADNGDVENAEKLFEELKKANYTRYTFVYNALIK 384
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVK KV++PNLL+RMILGG+RPD+E+YSLLK+I+QF
Sbjct: 385 AYVKGKVYDPNLLKRMILGGARPDSESYSLLKVIDQF 421
>ref|XP_006347407.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 535
Score = 160 bits (405), Expect = 2e-37
Identities = 75/97 (77%), Positives = 89/97 (91%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G D+ + KV+RSTPWLETTLSI+EIFA+NGDVEN EKLF+ELK ANYTRYTFVYN LIK
Sbjct: 437 GMDMETSIKVKRSTPWLETTLSIIEIFADNGDVENAEKLFEELKKANYTRYTFVYNALIK 496
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVK KV++PNLL+RMILGG+RPD+E+YSLLK+I+QF
Sbjct: 497 AYVKGKVYDPNLLKRMILGGARPDSESYSLLKVIDQF 533
>ref|XP_006488325.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Citrus sinensis]
Length = 521
Score = 159 bits (402), Expect = 5e-37
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G L+ T KVR STPWLETTLSI+EIFAE GDV N E LF+ELK ANYT+YTFVYNTLIK
Sbjct: 422 GMKLITTKKVRSSTPWLETTLSIIEIFAEKGDVGNAENLFEELKKANYTKYTFVYNTLIK 481
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQFPR 297
AYVKAK+ +PNLLRRMILGG+RPDAETYSLLKL EQF +
Sbjct: 482 AYVKAKINDPNLLRRMILGGARPDAETYSLLKLAEQFQK 520
>ref|XP_006424825.1| hypothetical protein CICLE_v10028134mg [Citrus clementina]
gi|557526759|gb|ESR38065.1| hypothetical protein
CICLE_v10028134mg [Citrus clementina]
Length = 546
Score = 159 bits (402), Expect = 5e-37
Identities = 78/99 (78%), Positives = 86/99 (86%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G L+ T KVR STPWLETTLSI+EIFAE GDV N E LF+ELK ANYT+YTFVYNTLIK
Sbjct: 447 GMKLITTKKVRSSTPWLETTLSIIEIFAEKGDVGNAENLFEELKKANYTKYTFVYNTLIK 506
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQFPR 297
AYVKAK+ +PNLLRRMILGG+RPDAETYSLLKL EQF +
Sbjct: 507 AYVKAKINDPNLLRRMILGGARPDAETYSLLKLAEQFQK 545
>ref|XP_004241523.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Solanum lycopersicum]
Length = 535
Score = 158 bits (400), Expect = 9e-37
Identities = 74/96 (77%), Positives = 88/96 (91%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G D+ + KV+RSTPWLETTLSI+EIFA+NGDVEN EKLF+ELK ANYTRYTFVYN LIK
Sbjct: 437 GMDMKTSIKVKRSTPWLETTLSIIEIFADNGDVENAEKLFEELKKANYTRYTFVYNALIK 496
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQ 288
AYVK KV++PNLL+RMILGG+RPD+E+YSLLK+I+Q
Sbjct: 497 AYVKGKVYDPNLLKRMILGGARPDSESYSLLKVIDQ 532
>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 155 bits (391), Expect = 1e-35
Identities = 75/98 (76%), Positives = 88/98 (89%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GRDLLATTK-VRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLI 177
G + ++TK VR+STPWLETTLS++EI AE GD+ENTEKLFKELK+A YTRYTFVYNTLI
Sbjct: 428 GSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLI 487
Query: 178 KAYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
KAYVKAK+ PNLLRRMI+GG+RPD+ETYSL+KL EQF
Sbjct: 488 KAYVKAKIHNPNLLRRMIVGGARPDSETYSLIKLSEQF 525
>gb|EOY18767.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 519
Score = 152 bits (385), Expect = 5e-35
Identities = 74/99 (74%), Positives = 85/99 (85%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G + + KVR STPWLETT ++EIFAE GDV+N EKLF+ELK ANYTRYTFVYNTLIK
Sbjct: 421 GMNFPTSNKVRCSTPWLETTFCMIEIFAEKGDVKNVEKLFEELKRANYTRYTFVYNTLIK 480
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQFPR 297
AYVKAK+++PNLL+RMILGG+RPDAETYSLLKL EQ R
Sbjct: 481 AYVKAKIYDPNLLKRMILGGARPDAETYSLLKLGEQLQR 519
>ref|XP_006417788.1| hypothetical protein EUTSA_v10007326mg [Eutrema salsugineum]
gi|557095559|gb|ESQ36141.1| hypothetical protein
EUTSA_v10007326mg [Eutrema salsugineum]
Length = 534
Score = 149 bits (376), Expect = 6e-34
Identities = 69/97 (71%), Positives = 83/97 (85%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G +L + VR STPWLETTLSI+E FAE GDVEN+EKLF+ELK+A Y RY FVYNTL K
Sbjct: 436 GSNLTTSKSVRSSTPWLETTLSIIECFAEKGDVENSEKLFEELKNAKYNRYAFVYNTLFK 495
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVK KV++PNL +RM+LGG+RPDAE+YSLLKL+EQ+
Sbjct: 496 AYVKGKVYDPNLFKRMVLGGARPDAESYSLLKLVEQY 532
>gb|EXC10650.1| hypothetical protein L484_025231 [Morus notabilis]
Length = 524
Score = 149 bits (375), Expect = 7e-34
Identities = 70/97 (72%), Positives = 82/97 (84%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G DL + +R STPWLETTLSI+E FA+ GDV N EKLF+ELK A Y RYTFV+NTLIK
Sbjct: 426 GMDLTTSNVIRNSTPWLETTLSIIESFADKGDVRNAEKLFEELKKAKYIRYTFVFNTLIK 485
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAK+++PNLL RMILGG+RPDAETYSL+KL EQ+
Sbjct: 486 AYVKAKIYDPNLLTRMILGGARPDAETYSLMKLAEQY 522
>gb|ESW22317.1| hypothetical protein PHAVU_005G143900g [Phaseolus vulgaris]
Length = 512
Score = 148 bits (374), Expect = 1e-33
Identities = 72/97 (74%), Positives = 82/97 (84%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G L + +VR STPWLETTLSIVEIFAE GDV N E+LF+E A Y RYTFVYNTLIK
Sbjct: 414 GLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLIK 473
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAK+++PNLL+RMILGG+RPDAETYSLLK+ EQF
Sbjct: 474 AYVKAKIYDPNLLKRMILGGARPDAETYSLLKIAEQF 510
>ref|XP_004294523.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 418
Score = 147 bits (372), Expect = 2e-33
Identities = 70/97 (72%), Positives = 80/97 (82%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G DL + VR STPWLETTL I+E F E GD+ N EKLF+EL A Y RYTFVYNTLIK
Sbjct: 320 GMDLTMSNVVRNSTPWLETTLLIIEAFVEKGDIRNVEKLFEELAKAKYIRYTFVYNTLIK 379
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAK+++PNLL+RMILGG+RPDAETYSL+KL EQF
Sbjct: 380 AYVKAKIYDPNLLKRMILGGARPDAETYSLMKLAEQF 416
>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 147 bits (372), Expect = 2e-33
Identities = 72/97 (74%), Positives = 81/97 (83%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G L + +VR STPWLETTLSIVEIFAE GDV N E+LF+E A Y RYTFVYNTLIK
Sbjct: 409 GLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLIK 468
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAK++ PNLL+RMILGG+RPDAETYSLLK+ EQF
Sbjct: 469 AYVKAKIYNPNLLKRMILGGARPDAETYSLLKIAEQF 505
>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 521
Score = 147 bits (372), Expect = 2e-33
Identities = 72/97 (74%), Positives = 79/97 (81%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G D + K++ S PWLETT SIVEIFAE GDV N EK F+EL A Y RYTFVYNTLIK
Sbjct: 423 GMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYTFVYNTLIK 482
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAKV+ P LLRRMILGG+RPDAETYSL+KLIEQF
Sbjct: 483 AYVKAKVYVPYLLRRMILGGARPDAETYSLIKLIEQF 519
>ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338250|gb|EFH68667.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 147 bits (371), Expect = 2e-33
Identities = 67/97 (69%), Positives = 83/97 (85%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G +L + +R STPWLETTLSI+E FAE GDVEN+EKLF+E+K+A Y RY FVYN L K
Sbjct: 438 GSNLKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFK 497
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAKV++PNL +RM+LGG+RPDAE+YSLLKL+EQ+
Sbjct: 498 AYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQY 534
>ref|XP_002314181.2| hypothetical protein POPTR_0009s03620g [Populus trichocarpa]
gi|550330961|gb|EEE88136.2| hypothetical protein
POPTR_0009s03620g [Populus trichocarpa]
Length = 525
Score = 147 bits (370), Expect = 3e-33
Identities = 69/97 (71%), Positives = 83/97 (85%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G++L + +V+ STPWLETTLSI+E+FAE GDV N EKLF+EL A Y R+TFV+N LIK
Sbjct: 427 GKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRHTFVFNILIK 486
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAK++ PNLLRRMILGG+RPDAETYSL+KL EQF
Sbjct: 487 AYVKAKIYSPNLLRRMILGGARPDAETYSLIKLAEQF 523
>ref|XP_006307211.1| hypothetical protein CARUB_v10008810mg [Capsella rubella]
gi|482575922|gb|EOA40109.1| hypothetical protein
CARUB_v10008810mg [Capsella rubella]
Length = 534
Score = 146 bits (368), Expect = 5e-33
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G L + VR STPWLETTLSI+E FAE GDVENTEKLF+E+K+A Y R+ FVYN L K
Sbjct: 436 GSTLKTSKSVRSSTPWLETTLSIIECFAEKGDVENTEKLFEEVKNAKYNRHAFVYNALFK 495
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAKV++PNL +RM+LGG+RPDAE+YSLLKL+EQ+
Sbjct: 496 AYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQY 532
>gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 144 bits (362), Expect = 2e-32
Identities = 66/97 (68%), Positives = 82/97 (84%)
Frame = +1
Query: 1 GRDLLATTKVRRSTPWLETTLSIVEIFAENGDVENTEKLFKELKDANYTRYTFVYNTLIK 180
G +L + + STPWLETTLSI+E FAE GDVEN+EKLF+E+K+A Y RY FVYN L K
Sbjct: 457 GLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFK 516
Query: 181 AYVKAKVFEPNLLRRMILGGSRPDAETYSLLKLIEQF 291
AYVKAKV++PNL +RM+LGG+RPDAE+YSLLKL+EQ+
Sbjct: 517 AYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQY 553