BLASTX nr result
ID: Catharanthus22_contig00021981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021981
(324 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 50 9e-09
emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera] 50 1e-08
emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera] 50 2e-08
emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera] 50 2e-08
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 49 3e-08
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 47 3e-08
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 47 7e-08
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 47 7e-08
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 48 2e-07
emb|CAN62325.1| hypothetical protein VITISV_029802 [Vitis vinifera] 43 2e-07
emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera] 44 1e-06
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group] 49 4e-06
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 49 4e-06
gb|ABF93543.1| retrotransposon protein, putative, unclassified [... 49 4e-06
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni... 49 4e-06
gb|ABF94836.1| retrotransposon protein, putative, unclassified [... 49 4e-06
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group] 49 4e-06
gb|AAX96296.1| retrotransposon protein, putative, unclassified [... 49 8e-06
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 50.1 bits (118), Expect(2) = 9e-09
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPVQ+ +TKHI+IR+H+I E V + ++LE+ +T
Sbjct: 1507 INISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDT 1545
Score = 35.0 bits (79), Expect(2) = 9e-09
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVI 122
T +Q DI TK+LD+ +F+K R LGIC++
Sbjct: 1545 TEEQIADIFTKALDAKQFEKLRGKLGICLL 1574
>emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera]
Length = 324
Score = 50.1 bits (118), Expect(2) = 1e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPV + +TKHI+IR+HFI + V+ + +SLEY T
Sbjct: 256 INISKNPVLHXRTKHIDIRHHFIRDLVEDKVVSLEYVPT 294
Score = 34.7 bits (78), Expect(2) = 1e-08
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVIN 119
T Q DILTK LD RF+ R ++G+C +N
Sbjct: 294 TEGQIADILTKPLDVSRFESLRKSIGLCTVN 324
>emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]
Length = 324
Score = 49.7 bits (117), Expect(2) = 2e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPV + +TKHI+IR+HFI + V+ + +SLEY T
Sbjct: 256 INISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYVPT 294
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVIN 119
T Q DILTK LD RF+ R ++G+C +N
Sbjct: 294 TEGQIADILTKPLDVSRFESLRKSIGLCTVN 324
>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
Length = 956
Score = 49.7 bits (117), Expect(2) = 2e-08
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPV + +TKHI+IR+HFI + V+ + +SLEY T
Sbjct: 888 INISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYVPT 926
Score = 34.3 bits (77), Expect(2) = 2e-08
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVIN 119
T Q DILTK LD RF+ R ++G+C +N
Sbjct: 926 TEGQIADILTKPLDVSRFESLRKSIGLCXVN 956
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 48.9 bits (115), Expect(2) = 3e-08
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPVQ+ +TKHI+IR+H+I + V + ++LE+ +T
Sbjct: 1480 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDT 1518
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVI 122
T +Q DI TK+LD+ +F+K R LGIC++
Sbjct: 1518 TEEQIADIFTKALDANQFEKLRGKLGICLL 1547
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 47.4 bits (111), Expect(2) = 3e-08
Identities = 19/39 (48%), Positives = 32/39 (82%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPVQ+ +TKHI+IR+H+I + V + ++L++ +T
Sbjct: 1506 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDT 1544
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVI 122
T +Q DI TK+LD+ +F+K R LGICV+
Sbjct: 1544 TEEQIADIFTKALDANQFEKLRGKLGICVL 1573
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 47.4 bits (111), Expect(2) = 7e-08
Identities = 19/39 (48%), Positives = 32/39 (82%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPVQ+ +TKHI+IR+H+I + V + ++L++ +T
Sbjct: 1506 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDT 1544
Score = 34.7 bits (78), Expect(2) = 7e-08
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVI 122
T +Q DI TK+LD+ +F+K R LGIC++
Sbjct: 1544 TEEQIADIFTKALDANQFEKLRGKLGICLL 1573
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 47.4 bits (111), Expect(2) = 7e-08
Identities = 19/39 (48%), Positives = 32/39 (82%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPVQ+ +TKHI+IR+H+I + V + ++L++ +T
Sbjct: 1504 INISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDT 1542
Score = 34.7 bits (78), Expect(2) = 7e-08
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVI 122
T +Q DI TK+LD+ +F+K R LGIC++
Sbjct: 1542 TEEQIADIFTKALDANQFEKLRGKLGICLL 1571
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPVQ+ +TKHI+IR+H+I + V + ++LE+ +T
Sbjct: 1506 INISKNPVQHNRTKHIDIRHHYIRDLVDDKIITLEHVDT 1544
Score = 32.7 bits (73), Expect(2) = 2e-07
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVI 122
T +Q DI TK+LD+ +F+K R LG C++
Sbjct: 1544 TEEQVADIFTKALDANQFEKLRGKLGTCLL 1573
>emb|CAN62325.1| hypothetical protein VITISV_029802 [Vitis vinifera]
Length = 399
Score = 43.1 bits (100), Expect(2) = 2e-07
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNP+ + +TKHI I YHFI + V+++ + L++ T
Sbjct: 331 INISKNPILHSRTKHIEISYHFIRDLVEEKIVYLKFIPT 369
Score = 37.7 bits (86), Expect(2) = 2e-07
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVIN 119
T Q DILTK LDS+RF+ R +LGIC+I+
Sbjct: 369 TKHQLADILTKPLDSLRFEYLRKSLGICLIH 399
>emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera]
Length = 1291
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI+KNPV + + KHI+I++HFI + V+ + + LEY T
Sbjct: 1223 INISKNPVLHSRIKHIDIKHHFICDLVEDKVVLLEYVPT 1261
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGICVIN 119
T Q VDIL K LD RF+ R ++G+C +N
Sbjct: 1261 TEGQIVDILIKPLDVSRFESLRKSIGLCTVN 1291
>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
Length = 2256
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQ+ +TKHI IRYHF+ + V++ T+ LE+ +
Sbjct: 1703 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVES 1741
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 217 MRTHKQSVDILTKSLDSMRFKKFR*TLGI 131
+ + KQ DI TK LD RF+ R LG+
Sbjct: 1739 VESEKQLADIFTKPLDRSRFEFLRSELGV 1767
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group]
Length = 2145
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQ+ +TKHI IRYHF+ + V++ T+ LE+ +
Sbjct: 1724 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVES 1762
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 217 MRTHKQSVDILTKSLDSMRFKKFR*TLGI 131
+ + KQ DI TK LD RF+ R LG+
Sbjct: 1760 VESEKQLADIFTKPLDRSRFEFLRSELGV 1788
>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2124
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQ+ +TKHI IRYHF+ + V++ T+ LE+ +
Sbjct: 1703 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVES 1741
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 217 MRTHKQSVDILTKSLDSMRFKKFR*TLGI 131
+ + KQ DI TK LD RF+ R LG+
Sbjct: 1739 VESEKQLADIFTKPLDRSRFEFLRSELGV 1767
>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108712101|gb|ABF99896.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1969
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQ+ +TKHI IRYHF+ + V++ T+ LE+ +
Sbjct: 1724 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVES 1762
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 217 MRTHKQSVDILTKSLDSMRFKKFR*TLGI 131
+ + KQ DI TK LD RF+ R LG+
Sbjct: 1760 VESEKQLADIFTKPLDRSRFEFLRSELGV 1788
>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1948
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQ+ +TKHI IRYHF+ + V++ T+ LE+ +
Sbjct: 1703 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVES 1741
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 217 MRTHKQSVDILTKSLDSMRFKKFR*TLGI 131
+ + KQ DI TK LD RF+ R LG+
Sbjct: 1739 VESEKQLADIFTKPLDRSRFEFLRSELGV 1767
>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1799
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQ+ +TKHI IRYHF+ + V++ T+ LE+ +
Sbjct: 1728 INIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVES 1766
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 217 MRTHKQSVDILTKSLDSMRFKKFR*TLGI 131
+ + KQ DI TK LD RF+ R LG+
Sbjct: 1764 VESEKQLADIFTKPLDRSRFEFLRSELGV 1792
>gb|AAX96296.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77548987|gb|ABA91784.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1325
Score = 48.5 bits (114), Expect(2) = 8e-06
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = -2
Query: 323 INITKNPVQYIKTKHINIRYHFI*EFVKQQTLSLEYANT 207
INI KNPVQY +TKHI+IR+HF+ + V++ + L++ +T
Sbjct: 1254 INIAKNPVQYSRTKHIDIRFHFLRDHVEKGDVELQFLDT 1292
Score = 26.6 bits (57), Expect(2) = 8e-06
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 211 THKQSVDILTKSLDSMRFKKFR*TLGI 131
T Q DI TK LDS RF R LGI
Sbjct: 1292 TKLQLADIFTKPLDSNRFAFLRGELGI 1318