BLASTX nr result

ID: Catharanthus22_contig00021963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00021963
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275411.2| PREDICTED: tRNA-dihydrouridine synthase 3-li...    56   6e-06

>ref|XP_002275411.2| PREDICTED: tRNA-dihydrouridine synthase 3-like [Vitis vinifera]
           gi|297744713|emb|CBI37975.3| unnamed protein product
           [Vitis vinifera]
          Length = 678

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
 Frame = -1

Query: 269 LKLLGLVGK----MKNFEDKDNDDQPVANGSDVDRDNGNAEAIVVGSSNEVECCSQELAD 102
           LKLLGL+GK    +K FEDK   D  V+NG+    DN   E +V+ S N+VE  S ++ +
Sbjct: 188 LKLLGLLGKANSKIKTFEDKGEGDLKVSNGTHATNDNSCGE-LVIDSDNKVE-GSPKMPE 245

Query: 101 DKPDDTDVF--DESRPIKKAKSSNDEAFGSGEIIN 3
           +  DD + F  DE RP KK KS+ +E   +G   N
Sbjct: 246 E--DDVEGFATDEPRPTKKIKSATNEECCTGNADN 278


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