BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00021858
         (1549 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   607   e-171
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   580   e-163
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              558   e-156
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   558   e-156
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...   545   e-152
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   532   e-148
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   531   e-148
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   530   e-148
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   528   e-147
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]       528   e-147
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   506   e-140
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   501   e-139
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   499   e-138
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...   495   e-137
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   486   e-134
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   486   e-134
ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutr...   485   e-134
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom...   482   e-133
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...   480   e-133
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   479   e-132

>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  607 bits (1565), Expect = e-171
 Identities = 295/406 (72%), Positives = 326/406 (80%), Gaps = 1/406 (0%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YA KDSNTRFSPT LGEALVMGYDDMGYELWKP+LR+MME
Sbjct: 518  AGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMME 577

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMKAVS+GTKRKAEVLE CLQQMKACF DAR NKGKL EAM+IFFERSNR    E    
Sbjct: 578  CDMKAVSIGTKRKAEVLETCLQQMKACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAV 637

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            GDVVRRCGLC ESDMVLR+KPDGNFMVGCLGYPQCRNVVWLP S+ EA VT NTC++C+P
Sbjct: 638  GDVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSP 697

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP+FKIQFKFR+LEIPPNY V HLGCIGGCD  LRQLVEICGTGSRN S+  GRG+GNPT
Sbjct: 698  GPVFKIQFKFRRLEIPPNYSVQHLGCIGGCDDILRQLVEICGTGSRNNSNTSGRGRGNPT 757

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          +C +C QTGHLS+ CPSQASRGRTAR +E +      GESSIPCNS
Sbjct: 758  ASSSAQRGNSRAQSSCAYCRQTGHLSNDCPSQASRGRTARAQEVD-----NGESSIPCNS 812

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDRSAPPHTNMSRSASNPXXXX 1191
            CGA C+LRTANTANNRGRKF+SCQSQ CNFFVWED+L+G R+   +T+ S S+       
Sbjct: 813  CGAPCILRTANTANNRGRKFFSCQSQECNFFVWEDNLNGGRAERANTSASTSSGR---GG 869

Query: 1192 XXXXXXXXXAHANN-AFVSATGEPISGRCFVCGDPSHFANVCPNRG 1326
                     AH++N +FVSATGEPI+GRCF+CGDP HFANVCP RG
Sbjct: 870  RGRGRGQSGAHSSNVSFVSATGEPITGRCFICGDPGHFANVCPRRG 915


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  580 bits (1496), Expect = e-163
 Identities = 288/406 (70%), Positives = 316/406 (77%), Gaps = 1/406 (0%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YA KDSNTRFSPT LGEALVMGYDDMGYELWKP+LR+MME
Sbjct: 518  AGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMME 577

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMKAVS GTKRKAEVLE CLQQMKACF DAR NK KL EAM+IFFERSNR  S E    
Sbjct: 578  CDMKAVSTGTKRKAEVLETCLQQMKACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAV 637

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G VVRRCGLC ESDMVLR+KPDGNFMVGCLGYPQCRNVVWLP S+ EA VT NTC  C+P
Sbjct: 638  GAVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSP 697

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP+FKIQFKFRQ EIPP+Y V HLGCIGGCD  LRQLVEICGTGSRN+     RG+GNPT
Sbjct: 698  GPVFKIQFKFRQQEIPPDYSVQHLGCIGGCDDILRQLVEICGTGSRNS-----RGRGNPT 752

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          +C +C QTGHLS+ CPSQASR RTAR +E +      GESS+PCNS
Sbjct: 753  AFSSAQRDNSRAQSSCAYCRQTGHLSNDCPSQASRDRTARAQEVD-----NGESSMPCNS 807

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDRSAPPHTNMSRSASNPXXXX 1191
            CGA C+LRTANTANNRGRKF+SCQS  CNFFVWED+LSG R+   +T+ S S+       
Sbjct: 808  CGAPCILRTANTANNRGRKFFSCQSSECNFFVWEDNLSGGRAERANTSASTSSGR---GG 864

Query: 1192 XXXXXXXXXAHANN-AFVSATGEPISGRCFVCGDPSHFANVCPNRG 1326
                     AH++N +FVSATGEPI+ RCF+CGDP HFANVCP RG
Sbjct: 865  RGRGRGQSGAHSSNVSFVSATGEPITVRCFICGDPGHFANVCPRRG 910


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  558 bits (1437), Expect = e-156
 Identities = 281/415 (67%), Positives = 313/415 (75%), Gaps = 10/415 (2%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKDSNTRFSPT LGEALVMGYDDMGYELWKP+LRSMME
Sbjct: 183  AGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMME 242

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMKAVS+GTKR+ EVL  CL+QMKACF+DAR NK KL EAM++FFERSNR   +E H  
Sbjct: 243  CDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEV 302

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            GDVVR+C LC ESDMVLR+KPDGNFMVGCLGYPQCRNVVWLP SI EA +TT +C+ CTP
Sbjct: 303  GDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTP 362

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++KIQFKFR+LEIPPNY+++HLGC+ GCD  LRQL EICGTGSR    I  RG+G+  
Sbjct: 363  GPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEILRQLTEICGTGSR----ISARGRGS-N 417

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          AC HC QTGH S+ CPS+  R R +++   N     +GESSIPCN 
Sbjct: 418  ASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMP---SGESSIPCNV 474

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMSRSASNPX 1182
            CG  C+LRTANT NNRGRKFYSCQSQ CNFFVWEDSL   SG RSA P T  S SASNP 
Sbjct: 475  CGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARS-SASNPS 533

Query: 1183 XXXXXXXXXXXXAHANNA------FVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                           + A      FVSATG+P+SG RCFVCGDPSHFANVCPNRG
Sbjct: 534  RRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 588


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  558 bits (1437), Expect = e-156
 Identities = 281/415 (67%), Positives = 313/415 (75%), Gaps = 10/415 (2%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKDSNTRFSPT LGEALVMGYDDMGYELWKP+LRSMME
Sbjct: 508  AGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMME 567

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMKAVS+GTKR+ EVL  CL+QMKACF+DAR NK KL EAM++FFERSNR   +E H  
Sbjct: 568  CDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEV 627

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            GDVVR+C LC ESDMVLR+KPDGNFMVGCLGYPQCRNVVWLP SI EA +TT +C+ CTP
Sbjct: 628  GDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTP 687

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++KIQFKFR+LEIPPNY+++HLGC+ GCD  LRQL EICGTGSR    I  RG+G+  
Sbjct: 688  GPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEILRQLTEICGTGSR----ISARGRGS-N 742

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          AC HC QTGH S+ CPS+  R R +++   N     +GESSIPCN 
Sbjct: 743  ASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMP---SGESSIPCNV 799

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMSRSASNPX 1182
            CG  C+LRTANT NNRGRKFYSCQSQ CNFFVWEDSL   SG RSA P T  S SASNP 
Sbjct: 800  CGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARS-SASNPS 858

Query: 1183 XXXXXXXXXXXXAHANNA------FVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                           + A      FVSATG+P+SG RCFVCGDPSHFANVCPNRG
Sbjct: 859  RRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 913


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score =  545 bits (1403), Expect = e-152
 Identities = 270/408 (66%), Positives = 302/408 (74%), Gaps = 4/408 (0%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPT LGEALVMGYDDMGYELWKPHLR+MME
Sbjct: 417  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPHLRAMME 476

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
            SDMK+VS+GTKRK EVLEACLQQMKACF+DARANK KLFEAM +FFERSNR  + + H  
Sbjct: 477  SDMKSVSMGTKRKGEVLEACLQQMKACFLDARANKEKLFEAMGVFFERSNRSQTADQHMS 536

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            GD+VR+CGLC ESDMVLRKKPDGNFMVGCLGYPQCRNVVWLP S+  A VTT  CS C+P
Sbjct: 537  GDIVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSP 596

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++ IQFKFRQLEIPPNY+V+HLGC+GGCD  LRQLVEICGTGSR+ S++PG GQG  +
Sbjct: 597  GPVYMIQFKFRQLEIPPNYNVDHLGCVGGCDSVLRQLVEICGTGSRSNSNVPGTGQGQTS 656

Query: 832  XXXXXXXXXXXXW-MACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCN 1008
                              H   TG  S   PS +S                AGESS+PC 
Sbjct: 657  SSSFNHPQHGNLRNRGAAHPTTTGRSSARHPSPSSTTHVG-----------AGESSVPCG 705

Query: 1009 SCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL-SGDRSAPPHTNMSR--SASNP 1179
            SCGA C LRTANTA NRGR+FYSCQ+Q+CNFFVW+D   SG         +SR   +SN 
Sbjct: 706  SCGAPCNLRTANTAANRGRQFYSCQAQSCNFFVWKDDAGSGGVRGGDGGGVSRRGGSSNQ 765

Query: 1180 XXXXXXXXXXXXXAHANNAFVSATGEPISGRCFVCGDPSHFANVCPNR 1323
                           A  +FVSATGEP+SGRCF+CG+PSHFAN CPNR
Sbjct: 766  RGRGWGRRRHDEQRRATTSFVSATGEPVSGRCFLCGEPSHFANECPNR 813


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  532 bits (1371), Expect = e-148
 Identities = 268/413 (64%), Positives = 303/413 (73%), Gaps = 9/413 (2%)
 Frame = +1

Query: 115  GIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMMES 294
            GIGTDATMHDHIKKLLDR YATKD++ RF+PT LGEALVMGYDDMGY+LWKP+LR++ME 
Sbjct: 514  GIGTDATMHDHIKKLLDRFYATKDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMER 573

Query: 295  DMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTGG 474
            DMK+VS GTK K EVL+  LQQMKACF+DAR NK KL EAM IFFERSNR    E +  G
Sbjct: 574  DMKSVSEGTKSKTEVLDTSLQQMKACFLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIG 633

Query: 475  DVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTPG 654
            +VVRRCGLC ESDMVL+K  DGNFMVGCLG+PQCRN VWLP S+ EAVVTTNTCS CTPG
Sbjct: 634  EVVRRCGLCRESDMVLKKSRDGNFMVGCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPG 693

Query: 655  PIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPTX 834
            P+++IQFKFRQLEIPPNYDVNHLGCIGGCD  L QL EICGTG R    +P R +G PT 
Sbjct: 694  PVYRIQFKFRQLEIPPNYDVNHLGCIGGCDEILTQLTEICGTGPR----MPARPRG-PTT 748

Query: 835  XXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNSC 1014
                          C +C +TGH S+ CPSQ  R R AR +  N  N  +GE+S+ CNSC
Sbjct: 749  STGNAHHTNPRQAVCMNCQETGHSSNDCPSQTLRSRNAR-QHGNVMNQQSGEASVSCNSC 807

Query: 1015 GASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGD--------RSAPPHTNMSRSA 1170
            G  CVLRTANTANNRGRKFYSC SQ CNFFVWED L+           ++ P +N  R+ 
Sbjct: 808  GTPCVLRTANTANNRGRKFYSCPSQECNFFVWEDDLNSGTGGGSFTRSNSIPTSNRGRNG 867

Query: 1171 SNPXXXXXXXXXXXXXAHANNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
             N              + +N  FVSATG+PISG RCFVCGDPSHFANVCPNRG
Sbjct: 868  RN-GGRGARGRGRNASSSSNVTFVSATGDPISGRRCFVCGDPSHFANVCPNRG 919


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  531 bits (1369), Expect = e-148
 Identities = 268/410 (65%), Positives = 302/410 (73%), Gaps = 5/410 (1%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR Y TKD+NTRFSPT LGEALVMGYDDMGYELWKP+LRS+ME
Sbjct: 509  AGIGTDATMHDHIKKLLDRFYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLME 568

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMK VSVG K KAEVL  CLQQMKACF+DA+ NK KL EAM+IFF RS+R   ++    
Sbjct: 569  CDMKEVSVGNKSKAEVLATCLQQMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSAL 628

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+ VR CGLC E++MVL+K  DGNFMVGC G+PQCRN VWLP  + EA +T N C++CTP
Sbjct: 629  GENVRPCGLCQEANMVLKKNRDGNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTP 688

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++ IQFKFRQLEIPP ++VNHLGCIGGCD TLRQL+EICGTGSR    + G G G PT
Sbjct: 689  GPVYLIQFKFRQLEIPPGFNVNHLGCIGGCDETLRQLIEICGTGSR----VQG-GNGPPT 743

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                           C +C QTGH S  CPS+ S  R  ++   N +N   GESSIPC++
Sbjct: 744  TTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRISATRHVQSHGMNQQN---GESSIPCST 800

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMSRSASNPX 1182
            CG  CVLRTANTANNRGRKFYSC SQACNFFVWED+L   S  RSA P  NMS SASNP 
Sbjct: 801  CGTPCVLRTANTANNRGRKFYSCSSQACNFFVWEDNLNNGSAPRSA-PRPNMSNSASNPS 859

Query: 1183 XXXXXXXXXXXXAHANN-AFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                          A +  FVSATGEPISG RCFVCGDPSHFAN CP+RG
Sbjct: 860  RRGGRGRGVQNAGRAADVTFVSATGEPISGRRCFVCGDPSHFANACPSRG 909


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  530 bits (1365), Expect = e-148
 Identities = 264/407 (64%), Positives = 294/407 (72%), Gaps = 2/407 (0%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YA KD+NTRF+PT +GEALVMGYDDMGYELWKP+LRSMME
Sbjct: 544  AGIGTDATMHDHIKKLLDRFYAIKDANTRFAPTNIGEALVMGYDDMGYELWKPNLRSMME 603

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
            SDMK VSVG K KA+VL  CLQQMKACF+DAR  K KL EAM IFFERS      +    
Sbjct: 604  SDMKEVSVGNKSKADVLANCLQQMKACFLDARLKKVKLLEAMGIFFERSG---GEDQQAA 660

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+VVR+CG+C ES+MVL+K  DGN MVGCL +PQCRN VWLP S+ EA VTTNTC++CTP
Sbjct: 661  GEVVRQCGICQESNMVLKKSRDGNLMVGCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTP 720

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++ IQFKFRQ EIPP ++VNHLGCIGGCD TLRQL+EICGTGSR    IP RG+G PT
Sbjct: 721  GPVYLIQFKFRQHEIPPGFNVNHLGCIGGCDETLRQLIEICGTGSR----IPARGRG-PT 775

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          AC +C Q GH S  CPSQ S  R AR    NP+   +GESSI C +
Sbjct: 776  ASSNNGQQSNHRQRACIYCQQMGHSSSDCPSQFSGSRNARANGMNPQ---SGESSIQCTT 832

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDRSAPPHTNMSRSASNPXXXX 1191
            CG  CVLRTANTANNRGRKFYSC SQ CNFFVWED         P   +S SASNP    
Sbjct: 833  CGTPCVLRTANTANNRGRKFYSCSSQECNFFVWEDDAKNGTRRMPQAGVSGSASNPSQRG 892

Query: 1192 XXXXXXXXXAH-ANNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                      H     FVSATG+PISG RC+VCG+PSHFAN CPNRG
Sbjct: 893  GRGRGGQSRGHNTGMTFVSATGDPISGRRCYVCGEPSHFANACPNRG 939


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  528 bits (1361), Expect = e-147
 Identities = 262/407 (64%), Positives = 297/407 (72%), Gaps = 3/407 (0%)
 Frame = +1

Query: 115  GIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMMES 294
            GIGTDATMHDHIKKLLDR YATKD+NTRFSPT LGEALVMGYDDMGY+LWKP+LR++ME 
Sbjct: 510  GIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMER 569

Query: 295  DMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTGG 474
            DMKAVS G K KAEVLE CLQQMK CF+DAR NK KLFEAM++FFERSNRP  ++ HT G
Sbjct: 570  DMKAVSEGNKSKAEVLETCLQQMKGCFLDARQNKVKLFEAMAVFFERSNRPGGDDQHTSG 629

Query: 475  DVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTPG 654
            + +RRCGLC E+DMVLRK  DGNFMVGC+GYPQCRN +WLP S+ EAV TTN C++CTPG
Sbjct: 630  EFIRRCGLCQEADMVLRKNRDGNFMVGCMGYPQCRNAIWLPGSVSEAVATTNICNSCTPG 689

Query: 655  PIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPTX 834
            P+  IQF FR+LEIPPNY  NHLGCIGGCD  LRQL EICGTGSR+A+    RG+G  T 
Sbjct: 690  PVHLIQFTFRRLEIPPNYSTNHLGCIGGCDEILRQLTEICGTGSRSAA----RGRGPTTS 745

Query: 835  XXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNSC 1014
                         AC +C Q+GH S  CPSQ+S  R+ R R  N +   +GE S+ C +C
Sbjct: 746  SNVQQNNTRQG--ACIYCHQSGHSSGDCPSQSSGPRSVRPRTMNAQ---SGEISVSCTTC 800

Query: 1015 GASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDRSAPPHTNMSRSASNPXXXXX 1194
            GA CVLRTANT  NRGRKFY C SQ CNFFVWED++S           + SA        
Sbjct: 801  GAPCVLRTANTTQNRGRKFYKCPSQECNFFVWEDNVSNGNGGRGFQRANVSAGRGAGGRG 860

Query: 1195 XXXXXXXXA-HA-NNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                    A HA    FVSATG+P SG RCFVCGDPSHFANVCPNRG
Sbjct: 861  SGGRGAQGAGHATGGTFVSATGDPNSGRRCFVCGDPSHFANVCPNRG 907


>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
          Length = 914

 Score =  528 bits (1359), Expect = e-147
 Identities = 266/412 (64%), Positives = 303/412 (73%), Gaps = 7/412 (1%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKDSNTRFSPT LGEALVMGYDDMGYELWKP+LRSMME
Sbjct: 512  AGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMME 571

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMK VSVG KRK EVL  CLQQMKACF+DAR NK KL EAM++FFERSN+   ++ H  
Sbjct: 572  FDMKEVSVGNKRKDEVLATCLQQMKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVA 631

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+VVR+CGLC ES MVL+K  DGNFMVGCLG+PQCRN +WLP S+ EA VT+N C +C P
Sbjct: 632  GEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNP 691

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++ IQFKFRQLEIPP ++ NHLGCIGGCD  LRQL+EICGTGSR    +  RG+G PT
Sbjct: 692  GPVYLIQFKFRQLEIPPGFNANHLGCIGGCDDILRQLIEICGTGSR----MSARGRG-PT 746

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          AC +C QTGH S+ CPSQ S  R +R+R  +      GE S+ C++
Sbjct: 747  TTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSGSRNSRSRTSSQN----GEPSVSCST 802

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWED---SLSGDRSAPPHTNMSRSASNPX 1182
            CG  CVLRTANTANNRGRKFYSC SQ CNFF+WED   + +G RS  P   ++ SASN  
Sbjct: 803  CGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDEHNNGTGGRSI-PRAGINGSASNSS 861

Query: 1183 XXXXXXXXXXXXAHANNA---FVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                          A  A   FVSATG+PISG RC+VCGDPSHFANVCPNRG
Sbjct: 862  RGGGRGRGRFGQNGARAADVTFVSATGDPISGRRCYVCGDPSHFANVCPNRG 913


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  506 bits (1302), Expect = e-140
 Identities = 255/423 (60%), Positives = 293/423 (69%), Gaps = 19/423 (4%)
 Frame = +1

Query: 115  GIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMMES 294
            GIGTDATMHDHIKKLLDR YATKD+NTRF+PT LGEALVMGYDDMGY LWKP+LR++ME 
Sbjct: 516  GIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEH 575

Query: 295  DMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTGG 474
            +MKAVS GTKRK EVL +CLQQMK CF+DAR NK KL EAM +FFERSN    +E    G
Sbjct: 576  EMKAVSEGTKRKDEVLASCLQQMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVG 635

Query: 475  DVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTPG 654
            +VV+ CGLC +SDMVL++  DGN+MVGCLG+PQCRNVVWLP SI EA VT++ C+ CTPG
Sbjct: 636  EVVQLCGLCQDSDMVLKRNRDGNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPG 695

Query: 655  PIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPTX 834
            P++ IQFKFRQLEIPPNY+ NHLGC+GGCD  LRQL EICGTGSR    +  RG+G  + 
Sbjct: 696  PVYLIQFKFRQLEIPPNYNANHLGCVGGCDDILRQLTEICGTGSR----VSARGRGTSSS 751

Query: 835  XXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNSC 1014
                          C  C Q GH S+ CPSQ+   R+A+ R+       +GESS+ C+SC
Sbjct: 752  NVQRDNPGQ---SVCIFCQQVGHSSNDCPSQSVGSRSAQRRQ-------SGESSVSCSSC 801

Query: 1015 GASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDR--------------SAP--- 1143
            G+ CVLRTANTANNRGRKFY CQSQ CNFFVWED++                  SAP   
Sbjct: 802  GSPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNGGNSVQRSNVRSSGSAPSNL 861

Query: 1144 -PHTNMSRSASNPXXXXXXXXXXXXXAHANNAFVSATGEPISG-RCFVCGDPSHFANVCP 1317
             P  N  R                        FVSATGEPIS  RCFVCGDPSHFANVCP
Sbjct: 862  NPGQNTGRGRGRGRGRGRDRDRDRGQGQIAATFVSATGEPISDRRCFVCGDPSHFANVCP 921

Query: 1318 NRG 1326
            NRG
Sbjct: 922  NRG 924


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  501 bits (1290), Expect = e-139
 Identities = 248/411 (60%), Positives = 286/411 (69%), Gaps = 7/411 (1%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKD+NTRFSPT LGEALVMGYDDMGYELWKP+LR++ME
Sbjct: 516  AGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALME 575

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DM  VSVG K KAEVLE CLQQMKACF+DAR  K KL EAM+IFFERSN    +E  T 
Sbjct: 576  HDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTA 635

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+VVRRC LCNESDM LRK  DGNFMVGC+ YPQCRN VWLP    EA VTTN C +C P
Sbjct: 636  GEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGP 695

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRN-ASSIPGRGQGNP 828
            GP++KI FKFRQ+ IPP +DVNHLGC+GGCD  L+QL++ICGTGSR+ A   PG    N 
Sbjct: 696  GPVYKILFKFRQIGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRSQARRTPGTAPSNN 755

Query: 829  TXXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCN 1008
                            C HC Q GH S  CPS+    R +R    NP N    ES++ CN
Sbjct: 756  IQGSNTRQSN-----VCIHCQQRGHASTNCPSRVPASRNSRPTATNPRN---DESTVSCN 807

Query: 1009 SCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMS--RSAS 1173
            +CG+ CVLRTANT  NRGR+F+SC +Q C+FF WEDS+   SG+ +   ++  S  R + 
Sbjct: 808  TCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGSR 867

Query: 1174 NPXXXXXXXXXXXXXAHANNAFVSATGEPISG-RCFVCGDPSHFANVCPNR 1323
                             +  +FVSATGEP+SG RCF CGDPSHFAN CPNR
Sbjct: 868  GRGRGGRGGQSSGGRRGSGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 918


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  499 bits (1285), Expect = e-138
 Identities = 247/408 (60%), Positives = 283/408 (69%), Gaps = 4/408 (0%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKD+NTRFSPT LGEALVMGYDDMGYELWKP+LR++ME
Sbjct: 516  AGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALME 575

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DM  VSVG K KAEVLE CLQQMKACF+DAR  K KL EAM+IFFERSN    +E  T 
Sbjct: 576  RDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTA 635

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+V+RRC LCNESDM LRK  DGNFMVGC+ YPQCRN VWLP    EA VTT+ C  C P
Sbjct: 636  GEVIRRCNLCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGP 695

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRN-ASSIPGRGQGNP 828
            GP++KI FKFRQ+ IPP +DVNHLGCIGGCD  L+QL++ICGTGSR+ A   PG    N 
Sbjct: 696  GPVYKILFKFRQIGIPPGFDVNHLGCIGGCDDILKQLIDICGTGSRSQARRAPGTVPSNN 755

Query: 829  TXXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCN 1008
                            C HC Q GH S  CPS+A+  R +R    NP N    ES++ CN
Sbjct: 756  IQGSNTRQGNF-----CIHCQQRGHASANCPSRATAFRNSRLTATNPRN---DESTVSCN 807

Query: 1009 SCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDRSAPPHTNMSRSASNPXXX 1188
            +CG  CVLRTANT  NRGR+F+SC +Q C+FF WEDS++         + S  +      
Sbjct: 808  TCGTQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGRG 867

Query: 1189 XXXXXXXXXXAHANN--AFVSATGEPISG-RCFVCGDPSHFANVCPNR 1323
                         N+  +FVSATGEP+SG RCF CGDPSHFANVCPNR
Sbjct: 868  RGGRGGQSGGGRRNSGTSFVSATGEPVSGIRCFSCGDPSHFANVCPNR 915


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
            gi|482548679|gb|EOA12873.1| hypothetical protein
            CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score =  495 bits (1274), Expect = e-137
 Identities = 244/409 (59%), Positives = 283/409 (69%), Gaps = 5/409 (1%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKD+NTRFSPT LGEALVMGYDDMGYELWKP+LR++ME
Sbjct: 516  AGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIME 575

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DM  VSVG K KAEVLE CLQQMKACF+DAR  K KL EAM+IFFERSN     E  T 
Sbjct: 576  HDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDEGENQTA 635

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+VVRRC LCNESDM LRK  DGNFMVGC+ YPQCRN VWLP    EA VTTN C +C P
Sbjct: 636  GEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGP 695

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++KI FKFRQ+ IPP ++VNHLGC+GGCD  L+QL++ICGTGSR+ +    R   +  
Sbjct: 696  GPVYKILFKFRQIGIPPGFEVNHLGCVGGCDGILKQLIDICGTGSRSQA----RRAPDTV 751

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                           C HC Q GH S  CPS+ S  R +R    NP N    ES++ CN+
Sbjct: 752  PPNNIRGSNTRQSNVCIHCQQRGHASSNCPSRVSASRNSRPTGTNPRN---DESTVSCNT 808

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMS-RSASNP 1179
            CG  CVLRTANT  NRGR+F+SC +Q C+FF WED +   SG+ +   ++  S R  +  
Sbjct: 809  CGTQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDGISNSSGNATTGSNSGGSGRRGNRG 868

Query: 1180 XXXXXXXXXXXXXAHANNAFVSATGEPISG-RCFVCGDPSHFANVCPNR 1323
                           +  +FVSATGEP+SG RCF CGDPSHFAN CPNR
Sbjct: 869  RGRGGRGGQSGGRRGSGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 917


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score =  486 bits (1250), Expect = e-134
 Identities = 254/415 (61%), Positives = 289/415 (69%), Gaps = 10/415 (2%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDD--MGYELWKPHLRSM 285
            A IGTDATM DHIKK+LDR YATKDS+TRF+PT LGEALV+GYDD  M Y+LWKP LRS 
Sbjct: 483  AKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSE 542

Query: 286  MESDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELH 465
            ME  M  V  G K KAEVL   LQ+M+ACF++AR NK KL EAM+IFFERS R  S+ELH
Sbjct: 543  MEKKMDDVKKGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELH 602

Query: 466  TGGDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSAC 645
              G+VVRRCGLC ESDM+LRK  DGNFMVGC+GYPQCRN VWLP S+ EAVVTTNTC+ C
Sbjct: 603  ATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFC 662

Query: 646  TPGPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGN 825
            TPGP++ IQFKFR+LEIPPNY  NHLGCIGGCD  L QL EICG G R    +P R +G 
Sbjct: 663  TPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPR----MPARPRG- 717

Query: 826  PTXXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPC 1005
            PT              AC +C +TGH S  CP +    +   T E N      GE+S+ C
Sbjct: 718  PTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLRYGNVQHHGTSEHN------GEASVSC 771

Query: 1006 NSCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMSRSASN 1176
            +SCG  CVLRTANT NNRGRKFYSCQSQ CNFFVWEDSL   +G RS     + S  A N
Sbjct: 772  SSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLNAGTGGRSVT--RSNSIPALN 829

Query: 1177 PXXXXXXXXXXXXXAH----ANNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
            P              +    AN  F+SATG+PISG RC+ CGDPSHFANVCP+RG
Sbjct: 830  PRQTGGRGSRGRGGQYGSRTANTTFMSATGDPISGRRCYTCGDPSHFANVCPHRG 884


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score =  486 bits (1250), Expect = e-134
 Identities = 254/415 (61%), Positives = 289/415 (69%), Gaps = 10/415 (2%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDD--MGYELWKPHLRSM 285
            A IGTDATM DHIKK+LDR YATKDS+TRF+PT LGEALV+GYDD  M Y+LWKP LRS 
Sbjct: 511  AKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSE 570

Query: 286  MESDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELH 465
            ME  M  V  G K KAEVL   LQ+M+ACF++AR NK KL EAM+IFFERS R  S+ELH
Sbjct: 571  MEKKMDDVKKGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFERSTRSSSDELH 630

Query: 466  TGGDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSAC 645
              G+VVRRCGLC ESDM+LRK  DGNFMVGC+GYPQCRN VWLP S+ EAVVTTNTC+ C
Sbjct: 631  ATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFC 690

Query: 646  TPGPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGN 825
            TPGP++ IQFKFR+LEIPPNY  NHLGCIGGCD  L QL EICG G R    +P R +G 
Sbjct: 691  TPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPR----MPARPRG- 745

Query: 826  PTXXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPC 1005
            PT              AC +C +TGH S  CP +    +   T E N      GE+S+ C
Sbjct: 746  PTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLRYGNVQHHGTSEHN------GEASVSC 799

Query: 1006 NSCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMSRSASN 1176
            +SCG  CVLRTANT NNRGRKFYSCQSQ CNFFVWEDSL   +G RS     + S  A N
Sbjct: 800  SSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLNAGTGGRSVT--RSNSIPALN 857

Query: 1177 PXXXXXXXXXXXXXAH----ANNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
            P              +    AN  F+SATG+PISG RC+ CGDPSHFANVCP+RG
Sbjct: 858  PRQTGGRGSRGRGGQYGSRTANTTFMSATGDPISGRRCYTCGDPSHFANVCPHRG 912


>ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutrema salsugineum]
            gi|557090866|gb|ESQ31513.1| hypothetical protein
            EUTSA_v10003618mg [Eutrema salsugineum]
          Length = 930

 Score =  485 bits (1249), Expect = e-134
 Identities = 244/417 (58%), Positives = 281/417 (67%), Gaps = 13/417 (3%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKD+NTRFSPT LGEALVMGYDDMGYELWKP+LR++ME
Sbjct: 517  AGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIME 576

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DM  VSVG+K KAEVL+ CLQQMKACF+DAR  K KL E M+IFFERSN     E  T 
Sbjct: 577  HDMNEVSVGSKTKAEVLQTCLQQMKACFLDARVKKAKLLETMTIFFERSNNTDEGENQTA 636

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+VVRRC LC+ESDM LRK  DGNFMVGC+ YPQCRN VWLP    EA VT + C +C P
Sbjct: 637  GEVVRRCNLCHESDMALRKNRDGNFMVGCMSYPQCRNAVWLPGPTLEASVTADVCQSCGP 696

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRN-ASSIPGRGQGNP 828
             P++KI+FKFRQ+ IPP +D NHLGC+GGCD  L+QL++ICGTGSR+ A + PG    N 
Sbjct: 697  APVYKIRFKFRQIGIPPGFDTNHLGCVGGCDDILKQLIDICGTGSRSQARTAPGASSNNF 756

Query: 829  TXXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTAR-TREFNPENGLAGESSIPC 1005
                            C HC Q GH S  CPS+ S  R  R T   NP N    E+++ C
Sbjct: 757  QGGNIRQNN------TCIHCQQRGHTSANCPSRISGSRNPRPTTGTNPGN---DETTVSC 807

Query: 1006 NSCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLS-GDRSAPPHTNMSRS----- 1167
            N+CG  C LRTANT  NRGR+F+SC SQ CNFF WEDS+S G  +A   +N   S     
Sbjct: 808  NTCGTPCALRTANTEANRGRRFFSCPSQGCNFFAWEDSISNGSGNATAGSNSGGSGRRGR 867

Query: 1168 ----ASNPXXXXXXXXXXXXXAHANNAFVSATGEPISG-RCFVCGDPSHFANVCPNR 1323
                 +                    +FVSATGEP+SG RCF CGDPSHFAN CPNR
Sbjct: 868  ARGRGNRGGQSGGARGGGGGRGGGGTSFVSATGEPVSGRRCFSCGDPSHFANACPNR 924


>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
          Length = 845

 Score =  482 bits (1241), Expect = e-133
 Identities = 230/335 (68%), Positives = 263/335 (78%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YATKDSNTRFSPT LGEALVMGYDDMGYELWKP+LRSMME
Sbjct: 512  AGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTKLGEALVMGYDDMGYELWKPNLRSMME 571

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
             DMK VSVG KRK EVL  CLQQMKACF+DAR NK KL EAM++FFERSN+   ++ H  
Sbjct: 572  FDMKEVSVGNKRKDEVLATCLQQMKACFLDARLNKVKLLEAMAVFFERSNQSAGDDNHVA 631

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G+VVR+CGLC ES MVL+K  DGNFMVGCLG+PQCRN +WLP S+ EA VT+N C +C P
Sbjct: 632  GEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNP 691

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
            GP++ IQFKFRQLEIPP ++ NHLGCIGGCD  LRQL+EICGTGSR    +  RG+G PT
Sbjct: 692  GPVYLIQFKFRQLEIPPGFNANHLGCIGGCDDILRQLIEICGTGSR----MSARGRG-PT 746

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                          AC +C QTGH S+ CPSQ S  R +R+R  + +NG+ GE S+ C++
Sbjct: 747  TTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSGSRNSRSRT-SSQNGMQGEPSVSCST 805

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWED 1116
            CG  CVLRTANTANNRGRKFYSC SQ CNFF+WED
Sbjct: 806  CGTPCVLRTANTANNRGRKFYSCPSQECNFFIWED 840


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
            gi|548834342|gb|ERM96738.1| hypothetical protein
            AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score =  480 bits (1236), Expect = e-133
 Identities = 236/406 (58%), Positives = 280/406 (68%), Gaps = 1/406 (0%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDDMGYELWKPHLRSMME 291
            AGIGTDATMHDHIKKLLDR YA KDSNTRFSPT LGEALVMGYD MG++LWKP+LRS ME
Sbjct: 586  AGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTTLGEALVMGYDCMGWDLWKPNLRSAME 645

Query: 292  SDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELHTG 471
            SDMKAVS G K K+EVL +CLQQMK CF+D +++K KLFE M IFFERSN P  + LH  
Sbjct: 646  SDMKAVSEGRKTKSEVLASCLQQMKDCFLDVKSHKAKLFETMGIFFERSNTPGGDNLHLA 705

Query: 472  GDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSACTP 651
            G  VR C  C ES+MVLR++PDG+FMVGCL +P CRNVVWLP +I EA+VT + C+ C P
Sbjct: 706  GGKVRSCQQCQESEMVLRRRPDGSFMVGCLRFPLCRNVVWLPGAISEALVTEHVCNVCNP 765

Query: 652  GPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGNPT 831
             P+FKIQFKFR++EIPPN+D  HLGCIGGCD TLR+L++ICGTG RN SS  G     PT
Sbjct: 766  EPVFKIQFKFRRMEIPPNFDTEHLGCIGGCDETLRELIQICGTGPRNLSSGSGTRGRQPT 825

Query: 832  XXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPCNS 1011
                         + C  C Q+GH S+ CP Q SR + A+       N  +G + + C S
Sbjct: 826  QFSGSAQRRNTSQVVCARCRQSGHSSNDCP-QISRSQDAQRPGHGNSN--SGGADVLCES 882

Query: 1012 CGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSLSGDRSAPPHTNMSRSASNPXXXX 1191
            C   C +RTANT NNRGR+FY C  Q CNFF+WED++          N +RS+       
Sbjct: 883  CQMPCTVRTANTENNRGRRFYKCDRQECNFFIWEDAIGSGNRGASRVNGNRSSVRGGQAG 942

Query: 1192 XXXXXXXXXAHANNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
                     + A   FV+ATGEP+S  RCF CGDPSHFANVCPNRG
Sbjct: 943  RGRGRRGARSGA-ATFVTATGEPVSDRRCFSCGDPSHFANVCPNRG 987


>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
          Length = 910

 Score =  479 bits (1234), Expect = e-132
 Identities = 253/415 (60%), Positives = 289/415 (69%), Gaps = 10/415 (2%)
 Frame = +1

Query: 112  AGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTYLGEALVMGYDD--MGYELWKPHLRSM 285
            A IGTDATM DHIKK+LDR YATKDS+TRF+PT LGEALV+GYDD  M Y+LWKP LRS 
Sbjct: 511  AKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLWKPDLRSE 570

Query: 286  MESDMKAVSVGTKRKAEVLEACLQQMKACFIDARANKGKLFEAMSIFFERSNRPPSNELH 465
            ME  M  V  G K KAEVL   LQ+M+ACF++AR NK KL EAM+IFFERS+   S+ELH
Sbjct: 571  MEKKMDDVKKGDKSKAEVLVTILQKMEACFLEARLNKVKLLEAMAIFFERSS---SDELH 627

Query: 466  TGGDVVRRCGLCNESDMVLRKKPDGNFMVGCLGYPQCRNVVWLPSSICEAVVTTNTCSAC 645
              G+VVRRCGLC ESDM+LRK  DGNFMVGC+GYPQCRN VWLP S+ EAVVTTNTC+ C
Sbjct: 628  ATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYPQCRNAVWLPGSVSEAVVTTNTCNFC 687

Query: 646  TPGPIFKIQFKFRQLEIPPNYDVNHLGCIGGCDFTLRQLVEICGTGSRNASSIPGRGQGN 825
            TPGP++ IQFKFR+LEIPPNY  NHLGCIGGCD  L QL EICG G R    +P R +G 
Sbjct: 688  TPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDEILAQLTEICGRGPR----MPARPRG- 742

Query: 826  PTXXXXXXXXXXXXWMACTHCGQTGHLSDTCPSQASRGRTARTREFNPENGLAGESSIPC 1005
            PT              AC +C +TGH S  CP +    +   T E N      GE+S+ C
Sbjct: 743  PTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLRYGNVQHHGTSEHN------GEASVSC 796

Query: 1006 NSCGASCVLRTANTANNRGRKFYSCQSQACNFFVWEDSL---SGDRSAPPHTNMSRSASN 1176
            +SCG  CVLRTANT NNRGRKFYSCQSQ CNFFVWEDSL   +G RS     + S  A N
Sbjct: 797  SSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLNAGTGGRSVT--RSNSIPALN 854

Query: 1177 PXXXXXXXXXXXXXAH----ANNAFVSATGEPISG-RCFVCGDPSHFANVCPNRG 1326
            P              +    AN  F+SATG+PISG RC+ CGDPSHFANVCP+RG
Sbjct: 855  PRQTGGRGSRGRGGQYGSRTANTTFMSATGDPISGRRCYTCGDPSHFANVCPHRG 909