BLASTX nr result
ID: Catharanthus22_contig00021843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021843
(523 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 96 6e-18
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 91 2e-16
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera] 87 2e-15
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 87 3e-15
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 81 1e-13
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 81 2e-13
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 79 6e-13
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 78 1e-12
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 78 1e-12
ref|XP_006604981.1| PREDICTED: uncharacterized protein LOC102661... 77 2e-12
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 77 2e-12
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida] 77 3e-12
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 76 4e-12
emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group] 76 5e-12
gb|ABF96581.1| retrotransposon protein, putative, Ty3-gypsy subc... 74 2e-11
gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-... 74 2e-11
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 73 4e-11
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 72 1e-10
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 72 1e-10
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 71 1e-10
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 95.5 bits (236), Expect = 6e-18
Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Frame = -1
Query: 295 EVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRN------ 140
EV SFHGL Y +F++D T+A PLTEVIKK VGFKWE+ QE AF+ LKE+
Sbjct: 1139 EVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPVLS 1198
Query: 139 -PFNLTKL*RD*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
P L + GV I VVL+QDK+P+AYFSEKL G
Sbjct: 1199 LPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGG 1237
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 9/99 (9%)
Frame = -1
Query: 295 EVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRN------ 140
+V SFHGL Y +F+RD T+A PLTEVIKK VGFKWE+ E AF+ LKE+
Sbjct: 558 KVRSFHGLAGFYRRFVRDFSTLAAPLTEVIKKNVGFKWEQAPEDAFQALKEKLTHAPVLS 617
Query: 139 -PFNLTKL*RD*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
P L + GV I VL+QDK+P+AYFSEKL G
Sbjct: 618 LPDFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGG 656
>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
Length = 960
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
TEV SFHGL Y +F++D T+A PLTE++KK VGFKW Q++AF +KER L
Sbjct: 426 TEVRSFHGLASFYFRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGAPLL 485
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
L + G+ I VL+Q+KRP+AYFSEKL G
Sbjct: 486 SLPNFSKTFEIECDASGIGIATVLMQEKRPIAYFSEKLNG 525
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 86.7 bits (213), Expect = 3e-15
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
TEV SFHGL Y +F++D T+A PLTE++KK VGFKW Q++AF +KER L
Sbjct: 743 TEVRSFHGLASFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGAPLL 802
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
L + G+ I VL+Q+KRP+AYFSEKL G
Sbjct: 803 SLPDFSKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLNG 842
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Frame = -1
Query: 304 NRTEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFN 131
N +EV SFHGL Y +F++D T+A PL E+++K VGFKW E QE+AF LKE+
Sbjct: 834 NVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKLTQAP 893
Query: 130 LTKL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+ L + V I VL+Q+ PLAYFSEKL G
Sbjct: 894 VLALPNFSKSFEIECDASNVGIGAVLLQEGHPLAYFSEKLKG 935
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 9/99 (9%)
Frame = -1
Query: 295 EVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLTK 122
EV SFHGL Y +F +D TI PLTEV+KK VGFKWE+ QE+AF++LK++ +
Sbjct: 648 EVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNAPVLI 707
Query: 121 L*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
L + G+ I VL+QD++ +A+FSEKL G
Sbjct: 708 LSEFLKTFEIECDASGIGIGAVLMQDQKLIAFFSEKLGG 746
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SFHGL Y +F++D TIA PL E++KK V F+W QE+AF+TLKE+ +
Sbjct: 889 TKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQEQAFQTLKEKLCSAQVL 948
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
L + G+ I VL+Q+ P+AYFSEKL+G
Sbjct: 949 SLPNFDKTFEIECDASGIGIGAVLMQEGHPIAYFSEKLSG 988
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
TEV SFHGL Y +F+RD TIA PLTEVIKK F W + Q+ AF LK++ L
Sbjct: 929 TEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLL 988
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + G I VL+QD +P+AYFSEKL+G
Sbjct: 989 QLPDFSKSFEVECDASGKGIGAVLMQDSKPIAYFSEKLSG 1028
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
TEV SFHGL Y +F+RD TIA PLTEVIKK F W + Q+ AF LK++ L
Sbjct: 929 TEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLL 988
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + G I VL+QD +P+AYFSEKL+G
Sbjct: 989 QLPDFSKSFEVECDASGKGIGAVLMQDSKPIAYFSEKLSG 1028
>ref|XP_006604981.1| PREDICTED: uncharacterized protein LOC102661110 [Glycine max]
Length = 766
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Frame = -1
Query: 304 NRTEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFN 131
N +EV SFHGL Y +F+RD T+A PL E++KK V F+W + QEKAF KE+ +
Sbjct: 389 NISEVRSFHGLTSFYRRFVRDFSTLAAPLNEIVKKNVVFEWGDQQEKAFIAFKEKLTNAH 448
Query: 130 LTKL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAGL 23
+ L + V IR VL+Q P+AYFSEKL G+
Sbjct: 449 VLALSNFAKSFELECDTSRVGIRAVLMQGGHPIAYFSEKLNGV 491
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRN----- 140
+EV FHGL Y +F++D T+A PLTEV+KK VGFKW + QE+AF LK R
Sbjct: 588 SEVRGFHGLASFYRRFVKDFSTLAAPLTEVVKKNVGFKWGKKQEEAFAALKHRLTNAPIL 647
Query: 139 --PFNLTKL*RD*SCYGVAIRVVLIQDKRPLAYFSEKL 32
P + V I VL+Q+ P+AYFSEKL
Sbjct: 648 AMPNFAKSFEIECDASNVGIGAVLLQEGHPIAYFSEKL 685
>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
Length = 435
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SFHGL Y +F++D + A PLTE++KK F W E QEKAF+ LK R + L
Sbjct: 107 TQVRSFHGLASFYRRFVKDFSSKAAPLTELVKKDQPFVWGEPQEKAFQELKGRLSTAPLL 166
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + GV I VL+QD +P+AYFSEKL G
Sbjct: 167 QLPDFGKAFEVECDASGVGIGGVLMQDSKPIAYFSEKLKG 206
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRN----- 140
+EV FHGL Y +F++D T+A PLTE++KK VGFKW + QE+AF LK R
Sbjct: 109 SEVRGFHGLASFYRRFVKDFSTLAAPLTEIVKKNVGFKWGKKQEEAFAALKHRLTNAPIL 168
Query: 139 --PFNLTKL*RD*SCYGVAIRVVLIQDKRPLAYFSEKL 32
P + V I VL+Q+ P+AYFSEKL
Sbjct: 169 AMPNFAKSFEIECDVSNVGIGAVLLQEGHPIAYFSEKL 206
>emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group]
Length = 625
Score = 75.9 bits (185), Expect = 5e-12
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SF GL YH+F++D T A PL E++KK V F W + QEK+F TLK++ L
Sbjct: 473 TQVRSFLGLAGFYHRFVKDFSTFAAPLNELMKKGVVFHWGKTQEKSFDTLKDKLTHTPLL 532
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + GV I VL+QD +P+AYFSEKL G
Sbjct: 533 QLPNFGKTFELECDASGVGIGGVLMQDGKPVAYFSEKLHG 572
>gb|ABF96581.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1211
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SF GL YH+F++D T A PL E+ KK V F W + QEK F TLK++ L
Sbjct: 745 TQVRSFLGLAGFYHRFVKDFSTFAAPLNELTKKGVVFHWGKTQEKLFDTLKDKLTHAPLL 804
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + GV I VL+QD +PLAYFS+KL G
Sbjct: 805 QLPNFGKTFELECDASGVGIGGVLMQDGKPLAYFSKKLHG 844
>gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1223
Score = 73.9 bits (180), Expect = 2e-11
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SF GL YH+F++D T A PL E+ KK V F W + QEK F TLK++ L
Sbjct: 729 TQVRSFLGLAGFYHRFVKDFSTFAAPLNELTKKGVVFHWGKTQEKLFDTLKDKLTHAPLL 788
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + GV I VL+QD +PLAYFS+KL G
Sbjct: 789 QLPNFGKTFELECDASGVGIGGVLMQDGKPLAYFSKKLHG 828
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 72.8 bits (177), Expect = 4e-11
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Frame = -1
Query: 304 NRTEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFN 131
N ++V SF GL Y +F+R TIA PL E+ KK V F+W E QEKAF+ LK+R +
Sbjct: 947 NVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSEGP 1006
Query: 130 LTKL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
L L + G+ I VL+Q+ +P+AYFSEKL G
Sbjct: 1007 LLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGG 1048
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SF GL Y +F++D TIA PL E+ KK V F W +VQE AF LK++ L
Sbjct: 949 TQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPLL 1008
Query: 124 KL-------*RD*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + G+ + VL+Q+ +P+AYFSEKL+G
Sbjct: 1009 QLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSG 1048
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SF GL Y +F+RD TIA PL EV KK V F W QE+AF LK++ L
Sbjct: 990 TQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVLKDKLTYAPLL 1049
Query: 124 KL*R-------D*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + G+ + VL+QD +P+AYFSEK +G
Sbjct: 1050 QLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSG 1089
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Frame = -1
Query: 298 TEVLSFHGLV--YHKFIRDIGTIATPLTEVIKKMVGFKWEEVQEKAFRTLKERRNPFNLT 125
T+V SF GL Y +F+RD TIA PL E+ KK V + W QE+AF LK++ L
Sbjct: 1002 TQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLL 1061
Query: 124 KL-------*RD*SCYGVAIRVVLIQDKRPLAYFSEKLAG 26
+L + G+ + VL+QD +P+AYFSEKL+G
Sbjct: 1062 QLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSG 1101