BLASTX nr result
ID: Catharanthus22_contig00021816
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021816
(205 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY03567.1| Pentatricopeptide repeat-containing protein, puta... 94 1e-17
ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus pe... 86 7e-15
ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group] g... 75 9e-12
gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japo... 75 9e-12
gb|EMT28278.1| Malate dehydrogenase, chloroplastic [Aegilops tau... 73 4e-11
gb|EMS47599.1| hypothetical protein TRIUR3_32599 [Triticum urartu] 71 2e-10
ref|XP_006644161.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [S... 69 5e-10
tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea m... 69 8e-10
ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group] g... 68 1e-09
gb|EEE57549.1| hypothetical protein OsJ_07882 [Oryza sativa Japo... 68 1e-09
gb|EEC70623.1| hypothetical protein OsI_01881 [Oryza sativa Indi... 67 2e-09
gb|EEC73759.1| hypothetical protein OsI_08419 [Oryza sativa Indi... 65 9e-09
ref|XP_004983975.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu... 62 1e-07
ref|XP_002311155.1| predicted protein [Populus trichocarpa] 62 1e-07
ref|XP_004237096.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
gb|ACU21153.1| unknown [Glycine max] 58 1e-06
gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indi... 58 1e-06
>gb|EOY03567.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 790
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITFCLKSCV+LG FEFG+ VH D F FG + FVGSSLIGLY+K+ D A+KVFDEI
Sbjct: 137 ITFCLKSCVDLGSFEFGKGVHVDAFKFGFSKDGFVGSSLIGLYSKFGDTGGASKVFDEIA 196
Query: 181 NKDIVVYT 204
+D+VVYT
Sbjct: 197 VRDVVVYT 204
>ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Fragaria vesca subsp. vesca]
Length = 819
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/68 (63%), Positives = 48/68 (70%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF KSC+EL H E GR +HAD FGLNG FVGSSLIG Y K + A KVFDEIT
Sbjct: 109 ITFACKSCIELNHLELGRGIHADAVKFGLNGNGFVGSSLIGFYGKCGSMGDARKVFDEIT 168
Query: 181 NKDIVVYT 204
+ D+VVYT
Sbjct: 169 HPDVVVYT 176
>gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus persica]
Length = 751
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/68 (61%), Positives = 50/68 (73%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF +KSC ELG+ EFG+ +H D GLN FVGSSLIGLY K I A+KVF+EIT
Sbjct: 100 ITFSVKSCTELGNLEFGQGIHGDALKSGLNANGFVGSSLIGLYCKCGRINDASKVFEEIT 159
Query: 181 NKDIVVYT 204
++DIVVYT
Sbjct: 160 DRDIVVYT 167
>ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|53792343|dbj|BAD53077.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113532542|dbj|BAF04925.1|
Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF +KSC EL + G+ VHAD+ L+G FVGSSLIGLY+K+ + VF+EI
Sbjct: 149 ITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEII 208
Query: 181 NKDIVVYT 204
NKDIV YT
Sbjct: 209 NKDIVAYT 216
>gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
Length = 920
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF +KSC EL + G+ VHAD+ L+G FVGSSLIGLY+K+ + VF+EI
Sbjct: 149 ITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEII 208
Query: 181 NKDIVVYT 204
NKDIV YT
Sbjct: 209 NKDIVAYT 216
>gb|EMT28278.1| Malate dehydrogenase, chloroplastic [Aegilops tauschii]
Length = 1360
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF LKSC +L + G+ +HAD+ GL+G FVGSSL+GLY+K I + +VF+EI
Sbjct: 136 ITFGLKSCTQLRNLLLGKGMHADSLKLGLSGDKFVGSSLVGLYSKLGKIDDSQRVFEEIF 195
Query: 181 NKDIVVYT 204
+KDIV YT
Sbjct: 196 DKDIVAYT 203
>gb|EMS47599.1| hypothetical protein TRIUR3_32599 [Triticum urartu]
Length = 936
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF LKSC +L + G+ +H D+ GL+G FVGSSL+GLY+K I + +VF+EI
Sbjct: 136 ITFGLKSCTQLRNLFLGKGLHVDSLKLGLSGDKFVGSSLVGLYSKLGKIDDSQRVFEEIF 195
Query: 181 NKDIVVYT 204
KDIV YT
Sbjct: 196 EKDIVAYT 203
>ref|XP_006644161.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like isoform X1 [Oryza brachyantha]
gi|573912922|ref|XP_006644162.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21300-like isoform X2 [Oryza brachyantha]
Length = 804
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF LKSC EL + G+ VH D+ L+G FVGSSLIGLY+K + VF EI
Sbjct: 149 ITFVLKSCTELKNLSLGKGVHVDSLKLCLSGDKFVGSSLIGLYSKLGRVDDLQGVFKEII 208
Query: 181 NKDIVVYT 204
NKDI+ YT
Sbjct: 209 NKDIIAYT 216
>ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
gi|241918961|gb|EER92105.1| hypothetical protein
SORBIDRAFT_01g032140 [Sorghum bicolor]
Length = 805
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
+TF LKSC EL + G+ +HAD+ GLN FVGSSL+GLY+K + + K F+EI
Sbjct: 147 VTFGLKSCTELRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEIL 206
Query: 181 NKDIVVYT 204
+KDIV YT
Sbjct: 207 DKDIVSYT 214
>tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
Length = 805
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
+TF LKSC+EL + G+ +HAD+ GL+ FVGSSL+GLY+K + + K F+EI
Sbjct: 147 VTFGLKSCIELRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEIL 206
Query: 181 NKDIVVYT 204
+KDIV YT
Sbjct: 207 DKDIVSYT 214
>ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group]
gi|50251347|dbj|BAD28323.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|255671158|dbj|BAH91839.1| Os02g0670700 [Oryza
sativa Japonica Group]
Length = 687
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF LKSC EL + G+ +H D+ FGL+G F+GSSLI LY+K + + VF EI
Sbjct: 32 ITFVLKSCTELENLYLGKGMHVDSLKFGLSGDKFIGSSLIVLYSKLHRMDDSQGVFKEII 91
Query: 181 NKDIVVYT 204
+KD+V YT
Sbjct: 92 DKDVVAYT 99
>gb|EEE57549.1| hypothetical protein OsJ_07882 [Oryza sativa Japonica Group]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF LKSC EL + G+ +H D+ FGL+G F+GSSLI LY+K + + VF EI
Sbjct: 32 ITFVLKSCTELENLYLGKGMHVDSLKFGLSGDKFIGSSLIVLYSKLHRMDDSQGVFKEII 91
Query: 181 NKDIVVYT 204
+KD+V YT
Sbjct: 92 DKDVVAYT 99
>gb|EEC70623.1| hypothetical protein OsI_01881 [Oryza sativa Indica Group]
Length = 381
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +1
Query: 19 SCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEITNKDIVV 198
SC EL + G+ VHAD+ L+G FVGSSLIGLY+K+ + VF+EI NKDIV
Sbjct: 62 SCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVA 121
Query: 199 YT 204
YT
Sbjct: 122 YT 123
>gb|EEC73759.1| hypothetical protein OsI_08419 [Oryza sativa Indica Group]
Length = 725
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
ITF LKSC EL + G+ +H D+ FGL+G FVGSSLI L +K + + VF EI
Sbjct: 32 ITFVLKSCTELENLYLGKGMHVDSLKFGLSGDKFVGSSLIVLSSKLHRMDGSQGVFKEII 91
Query: 181 NKDIVVYT 204
+KD+V YT
Sbjct: 92 DKDVVAYT 99
>ref|XP_004983975.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like isoform X1 [Setaria italica]
gi|514818548|ref|XP_004983976.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21300-like isoform X2 [Setaria italica]
Length = 802
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +1
Query: 1 ITFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEIT 180
+TF LKSC EL + G+ +HAD+ GL+ FVGSSL+ LY+K + + K F+EI
Sbjct: 145 VTFGLKSCTELRNLLLGKGMHADSLKLGLSRDNFVGSSLVRLYSKLARMDDSEKAFEEIL 204
Query: 181 NKDIVVYT 204
+KD V YT
Sbjct: 205 DKDTVSYT 212
>ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa]
gi|550332465|gb|EEE88523.2| hypothetical protein
POPTR_0008s05220g [Populus trichocarpa]
Length = 878
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 4 TFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEITN 183
TF LK+C +F+ G +VH D GL F+G+SL+ +Y K D+K+A KVFD++
Sbjct: 135 TFVLKACTGALYFKEGILVHKDIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPE 194
Query: 184 KDIVVYT 204
KD+V ++
Sbjct: 195 KDVVAWS 201
>ref|XP_002311155.1| predicted protein [Populus trichocarpa]
Length = 305
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 4 TFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEITN 183
TF LK+C +F+ G +VH D GL F+G+SL+ +Y K D+K+A KVFD++
Sbjct: 135 TFVLKACTGALYFKEGILVHKDIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPE 194
Query: 184 KDIVVYT 204
KD+V ++
Sbjct: 195 KDVVAWS 201
>ref|XP_004237096.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Solanum lycopersicum]
Length = 766
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +1
Query: 4 TFCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEITN 183
TF LK+C + FE G +H + N L F+G+ +I +Y+K D++ A KVFD++ +
Sbjct: 19 TFVLKACTLMSDFEKGIKIHEEIVNRSLENDVFIGTGIIDMYSKMGDLESARKVFDKMPD 78
Query: 184 KDIVVY 201
KD+VV+
Sbjct: 79 KDVVVW 84
>gb|ACU21153.1| unknown [Glycine max]
Length = 529
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +1
Query: 7 FCLKSCVELGHFEFGRIVHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEITNK 186
F LK+C G + GR++H G++ FVG++L+ YAK D++V+ KVFDEI ++
Sbjct: 123 FVLKACGAEGASKKGRVIHEHAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHR 182
Query: 187 DIV 195
DIV
Sbjct: 183 DIV 185
>gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indica Group]
Length = 870
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +1
Query: 58 VHADTFNFGLNGGCFVGSSLIGLYAKYDDIKVAAKVFDEITNKDIVVYT 204
VHAD+ L+G FVGSSLIGLY+K+ + VF+EI NKDIV YT
Sbjct: 126 VHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYT 174