BLASTX nr result

ID: Catharanthus22_contig00021738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00021738
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249416.1| PREDICTED: uncharacterized protein LOC101251...    81   2e-13
ref|XP_006369000.1| hypothetical protein POPTR_0001s15580g [Popu...    61   1e-07
ref|XP_002304286.2| hypothetical protein POPTR_0003s07640g [Popu...    59   7e-07
ref|XP_006477156.1| PREDICTED: zinc finger CCCH domain-containin...    58   1e-06
ref|XP_006440274.1| hypothetical protein CICLE_v10018818mg [Citr...    56   4e-06

>ref|XP_004249416.1| PREDICTED: uncharacterized protein LOC101251343 [Solanum
            lycopersicum]
          Length = 890

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 51/132 (38%), Positives = 65/132 (49%)
 Frame = -2

Query: 397  HHSEXXXXXXXXXXXXXHPERDHHCSSHPSRAEPSSKLTSKPTTEHPAAXXXXXXXFSRI 218
            HH +                  HH S   + A+PSS   S+P ++  +        FSRI
Sbjct: 758  HHEDRHRHEDRHQRGTHRSSSSHHRSESSANAKPSSVGPSEPQSK--SVDKRKASVFSRI 815

Query: 217  SFPAEELAAASKKRMTXXXXXXXXXXXXXXXXXXSNGYHEDHKPTSGLRKSAGLAAVTVD 38
            SFPAE+ AAASKKR                    +NGYH ++K T+G RKS   A V+VD
Sbjct: 816  SFPAEDSAAASKKRKVPSSSEVPVSSSASHRGGTTNGYHGEYKTTTGSRKS---ATVSVD 872

Query: 37   NDSSDDDRHFKR 2
             +SSDDDRHFKR
Sbjct: 873  YESSDDDRHFKR 884


>ref|XP_006369000.1| hypothetical protein POPTR_0001s15580g [Populus trichocarpa]
            gi|550347359|gb|ERP65569.1| hypothetical protein
            POPTR_0001s15580g [Populus trichocarpa]
          Length = 853

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 16/129 (12%)
 Frame = -2

Query: 340  ERDHHCSSHP-SRAEPSSKLTSKPTTEHPAAXXXXXXX-----FSRISFPAEELAAASKK 179
            +RDH    HP +R+E SSK  S+ TT+ PA+            FSRISFPAEE  A+ K+
Sbjct: 698  DRDHR--HHPRNRSESSSKAVSETTTK-PASTTATDRNHKVSVFSRISFPAEEEPASKKR 754

Query: 178  RMT--------XXXXXXXXXXXXXXXXXXSNGYHEDHKPTS--GLRKSAGLAAVTVDNDS 29
            +++                          +NGY++D+K +S      S+  AA  +D +S
Sbjct: 755  KVSSSSEAAPAGGGGGPASSAHHKSSSPVNNGYYDDYKSSSVKARTSSSSAAAAAMDYES 814

Query: 28   SDDDRHFKR 2
            SDDDRHFKR
Sbjct: 815  SDDDRHFKR 823


>ref|XP_002304286.2| hypothetical protein POPTR_0003s07640g [Populus trichocarpa]
            gi|550342650|gb|EEE79265.2| hypothetical protein
            POPTR_0003s07640g [Populus trichocarpa]
          Length = 865

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
 Frame = -2

Query: 340  ERDHHCSSHPSRAEPSSKLTSKPTTEHPAAXXXXXXX----FSRISFPAEELAAASKKRM 173
            +RDH    H  R+E SSK  S+ TT+ P+            FSRISFPAE    + K+++
Sbjct: 697  DRDHR-HHHRHRSESSSKAVSETTTKPPSTTVTDRKQKVSVFSRISFPAEGEPTSKKRKV 755

Query: 172  T---------XXXXXXXXXXXXXXXXXXSNGYHEDHKPTS-GLRKSAGLAAVT--VDNDS 29
            +                           +NGY++D+K +S   RKS+   A T  +D +S
Sbjct: 756  SSSSEAAPAATGGGGPLSSTHHKSSSPVNNGYYDDYKSSSVKTRKSSSSVAATAAMDYES 815

Query: 28   SDDDRHFKR 2
            SDDDRHFKR
Sbjct: 816  SDDDRHFKR 824


>ref|XP_006477156.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Citrus
            sinensis]
          Length = 869

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
 Frame = -2

Query: 340  ERDHH----CSSHPSRAEPSSKLTSKPTTEHPAAXXXXXXX--FSRISFPAEELAAASKK 179
            +R+HH     SS  S   P++  +SKPT+   A          FSRISFP EE AAA+ K
Sbjct: 716  DRNHHHRTESSSKHSSEPPTTTTSSKPTSTAAAGADKKHKGSVFSRISFPEEEAAAAAAK 775

Query: 178  R-----MTXXXXXXXXXXXXXXXXXXSNGYHEDHKPTSGLRKSAGLAAVT--VDNDSSDD 20
            +      +                  +NGY++D+K +S     A   A +   D +SSDD
Sbjct: 776  KRKISISSSSEAVVSGVSGHQKLPTNTNGYYDDYKSSSSHSAKALKTAASRGADYESSDD 835

Query: 19   DRHFKR 2
            DRHFKR
Sbjct: 836  DRHFKR 841


>ref|XP_006440274.1| hypothetical protein CICLE_v10018818mg [Citrus clementina]
            gi|557542536|gb|ESR53514.1| hypothetical protein
            CICLE_v10018818mg [Citrus clementina]
          Length = 870

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
 Frame = -2

Query: 340  ERDHH----CSSHPSRAEPSSKLTSKPTTEHPAAXXXXXXX--FSRISFPAEELAAASKK 179
            +R+HH     SS  S   P++  +SKPT+   A          FSRISFP EE AA  +K
Sbjct: 720  DRNHHHRTESSSKHSSEPPTTTTSSKPTSTAAAGADKKHKGSVFSRISFPEEEAAAKKRK 779

Query: 178  --RMTXXXXXXXXXXXXXXXXXXSNGYHEDHKPTSGLRKSAGLAAVT--VDNDSSDDDRH 11
                +                  +NGY++D+K +S     A   A +   D +SSDDDRH
Sbjct: 780  ISLSSSSEAVVSGVSGHQKLPTNTNGYYDDYKSSSSHSAKALKTAASRGADYESSDDDRH 839

Query: 10   FKR 2
            FKR
Sbjct: 840  FKR 842


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